| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is mnmG
Identifier: 113476427
GI number: 113476427
Start: 4415949
End: 4417862
Strand: Reverse
Name: mnmG
Synonym: Tery_2841
Alternate gene names: 113476427
Gene position: 4417862-4415949 (Counterclockwise)
Preceding gene: 113476428
Following gene: 113476426
Centisome position: 57.0
GC content: 40.23
Gene sequence:
>1914_bases ATGAACCAAACTTTTGACTTCCAAGATGAATACGACATCATCGTAGTAGGCGCAGGCCACTCTGGGTGTGAAGCTGCTCT CGCTACTGCACGCCTCGGTTGCCACACCCTACTACTAACTCTAAACCTTGACAAAATTGCTTGGCAACCATGTAACCCGG CTGTTGGGGGACCTGCAAAATCTCAACTTACCCATGAAGTGGATGCCTTGGGTGGAGAAATAGGTAAAATGGCAGACCGC ACCTACCTGCAAAAACGTATTCTCAATTCTTCTCGCGGACCTGCCGTTTGGGCGTTACGAGCTCAAACCGACAAACGAGA ATACGCTACCATTATGCGTAACATTGTCGAAAACCAAGAAAACCTCAGAGTTCGCGAAAGTATGGTAACAGACTTAGTTT TGGGAGATAACGAGGAAATTATTGGAGTTGAAACCTACTTCGGCGTCGCCTTTAAATGTAAAGCTGTCATCCTGACCACA GGAACTTTCCTTGGTGGAGTTATCTGGGTAGGCAATAAGTCAATGCCTGCGGGCCGCGCCGGAGAATTTTCTGCTATTGG TCTGAGTGAAACCCTAAATAAACTTGGTTTTGAAACCGGACGACTAAAAACAGGTACTCCTGCCAGAGTTGACAAACGTT CTGTTGACTACACCGACCTGGAAGCTCAACCAGGAGATGAAAAAGTACGTTGGTTTACCTTCGACCCAGAAGTCTGGGTG GAAAGAGAACAGATGTGTTGCTACCTGACACGCACTACTCCAGAAACTCACAAGTTAATTCGCGATAATTTGCATTTGTC TCCTGTTTATGGTGGGTGGGTGGATGCGAAAGGTCCGCGCTATTGTCCGAGTATTGAAGATAAAATTGTCCGGTTTGCGG ATAAACATAGTCATCAAATATTTATTGAGCCCGAAGGTCGTGATATTCCTGAACTTTATATTCAGGGGTTTTCTACTGGT TTGCCAGAGAAATTACAACTGCAAATGTTGCAGAGTTTACCTGGTTTAGAAAATTGTTTGATGTTACGACCTGCTTATGC GGTAGAATATGATTATTTACCTGCTACCCAATGTTATCCGACGTTGATGACTAAGAAAATTGAAGGGTTATTTTGTGCTG GTCAAATTAATGGTACGACTGGATATGAAGAAGCAGCAGCTCAAGGTCTTGTGGCGGGAATAAATGCAGTTAAATTTGTT AAGAATGAAGAGATGATTATTTTCCCACGGGAACAAAGTTATATTGGTACTTTAATTGACGATCTATGTACAAAAGATTT GCGAGAACCCTATCGAATGTTAACTAGTCGTTCGGAATATCGTTTGATTTTACGGTCGGATAATGCTGACCAAAGATTAA CTCCTTTGGGTAGAGAAATTGGTTTAATTGATGACCGTCGGTGGGAGTTATTTGAGAGTAAACAAGCTAATATTAATTCT GAAAAATCTAGGTTAAATTCAACTCGAATTAAAGAACTAGATGAGGTTGCTATTAATATAGTCGCTGATACTCATACAAA AATTAAGGGTTCGATTACTTTAGCAGATCTGTTGCGTAGACCTGGTTTCCATTATGTAGATTTGGAAAAGTATAATCTGG GGAATTTAGATTTAAAATTAGTTGAAAAAGAGGGCGCAGAAATTGATATTAAATATTCCGGTTATTTGCAAAGACAACAG AATCAAATTGATCAAATTAGTCGTCAAAAAAATCGTAGGTTACCTACTAATTTAGATTATTTATCTATTTCTACTTTATC CCTAGAGGCACGGGAAAAATTATCGAAAGTTCAGCCTTTAACTATTGGTCAAGCATCTCGAATTGGTGGAGTAAATCCGG CGGATATTAATGCTTTATTAGTTTATTTAGAGGTGCAATATCGACAGTTTCAATTAACTTCTGCTAATGTTTAG
Upstream 100 bases:
>100_bases ATCTCAAGCTTCCCCTTTCAAGGGGATGAAAAAGAAAATTCAGGTTTTCAAGCTTCCGGCTTCAGCGGTCGGCACCGATA ACTAATAACTGATAACTGAA
Downstream 100 bases:
>100_bases TTAATGGAAAAGTCAGTCATATGAAGTGAATTTCATATCTGTTGCCCATCTGCTATGTTATACTAATGTTAGACTTTTGG TGAGGGAATTTAAGGTTTCC
Product: tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A
Number of amino acids: Translated: 637; Mature: 637
Protein sequence:
>637_residues MNQTFDFQDEYDIIVVGAGHSGCEAALATARLGCHTLLLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDALGGEIGKMADR TYLQKRILNSSRGPAVWALRAQTDKREYATIMRNIVENQENLRVRESMVTDLVLGDNEEIIGVETYFGVAFKCKAVILTT GTFLGGVIWVGNKSMPAGRAGEFSAIGLSETLNKLGFETGRLKTGTPARVDKRSVDYTDLEAQPGDEKVRWFTFDPEVWV EREQMCCYLTRTTPETHKLIRDNLHLSPVYGGWVDAKGPRYCPSIEDKIVRFADKHSHQIFIEPEGRDIPELYIQGFSTG LPEKLQLQMLQSLPGLENCLMLRPAYAVEYDYLPATQCYPTLMTKKIEGLFCAGQINGTTGYEEAAAQGLVAGINAVKFV KNEEMIIFPREQSYIGTLIDDLCTKDLREPYRMLTSRSEYRLILRSDNADQRLTPLGREIGLIDDRRWELFESKQANINS EKSRLNSTRIKELDEVAINIVADTHTKIKGSITLADLLRRPGFHYVDLEKYNLGNLDLKLVEKEGAEIDIKYSGYLQRQQ NQIDQISRQKNRRLPTNLDYLSISTLSLEAREKLSKVQPLTIGQASRIGGVNPADINALLVYLEVQYRQFQLTSANV
Sequences:
>Translated_637_residues MNQTFDFQDEYDIIVVGAGHSGCEAALATARLGCHTLLLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDALGGEIGKMADR TYLQKRILNSSRGPAVWALRAQTDKREYATIMRNIVENQENLRVRESMVTDLVLGDNEEIIGVETYFGVAFKCKAVILTT GTFLGGVIWVGNKSMPAGRAGEFSAIGLSETLNKLGFETGRLKTGTPARVDKRSVDYTDLEAQPGDEKVRWFTFDPEVWV EREQMCCYLTRTTPETHKLIRDNLHLSPVYGGWVDAKGPRYCPSIEDKIVRFADKHSHQIFIEPEGRDIPELYIQGFSTG LPEKLQLQMLQSLPGLENCLMLRPAYAVEYDYLPATQCYPTLMTKKIEGLFCAGQINGTTGYEEAAAQGLVAGINAVKFV KNEEMIIFPREQSYIGTLIDDLCTKDLREPYRMLTSRSEYRLILRSDNADQRLTPLGREIGLIDDRRWELFESKQANINS EKSRLNSTRIKELDEVAINIVADTHTKIKGSITLADLLRRPGFHYVDLEKYNLGNLDLKLVEKEGAEIDIKYSGYLQRQQ NQIDQISRQKNRRLPTNLDYLSISTLSLEAREKLSKVQPLTIGQASRIGGVNPADINALLVYLEVQYRQFQLTSANV >Mature_637_residues MNQTFDFQDEYDIIVVGAGHSGCEAALATARLGCHTLLLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDALGGEIGKMADR TYLQKRILNSSRGPAVWALRAQTDKREYATIMRNIVENQENLRVRESMVTDLVLGDNEEIIGVETYFGVAFKCKAVILTT GTFLGGVIWVGNKSMPAGRAGEFSAIGLSETLNKLGFETGRLKTGTPARVDKRSVDYTDLEAQPGDEKVRWFTFDPEVWV EREQMCCYLTRTTPETHKLIRDNLHLSPVYGGWVDAKGPRYCPSIEDKIVRFADKHSHQIFIEPEGRDIPELYIQGFSTG LPEKLQLQMLQSLPGLENCLMLRPAYAVEYDYLPATQCYPTLMTKKIEGLFCAGQINGTTGYEEAAAQGLVAGINAVKFV KNEEMIIFPREQSYIGTLIDDLCTKDLREPYRMLTSRSEYRLILRSDNADQRLTPLGREIGLIDDRRWELFESKQANINS EKSRLNSTRIKELDEVAINIVADTHTKIKGSITLADLLRRPGFHYVDLEKYNLGNLDLKLVEKEGAEIDIKYSGYLQRQQ NQIDQISRQKNRRLPTNLDYLSISTLSLEAREKLSKVQPLTIGQASRIGGVNPADINALLVYLEVQYRQFQLTSANV
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family
Homologues:
Organism=Homo sapiens, GI74024895, Length=646, Percent_Identity=41.4860681114551, Blast_Score=429, Evalue=1e-120, Organism=Homo sapiens, GI19882217, Length=663, Percent_Identity=40.1206636500754, Blast_Score=416, Evalue=1e-116, Organism=Homo sapiens, GI183227703, Length=675, Percent_Identity=39.4074074074074, Blast_Score=410, Evalue=1e-114, Organism=Escherichia coli, GI2367273, Length=623, Percent_Identity=48.1540930979133, Blast_Score=581, Evalue=1e-167, Organism=Caenorhabditis elegans, GI17534255, Length=625, Percent_Identity=40.16, Blast_Score=442, Evalue=1e-124, Organism=Saccharomyces cerevisiae, GI6321202, Length=637, Percent_Identity=42.7001569858713, Blast_Score=466, Evalue=1e-132, Organism=Drosophila melanogaster, GI24658174, Length=634, Percent_Identity=41.0094637223975, Blast_Score=437, Evalue=1e-122,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MNMG_TRIEI (Q110Q9)
Other databases:
- EMBL: CP000393 - RefSeq: YP_722488.1 - ProteinModelPortal: Q110Q9 - SMR: Q110Q9 - STRING: Q110Q9 - GeneID: 4245144 - GenomeReviews: CP000393_GR - KEGG: ter:Tery_2841 - NMPDR: fig|203124.1.peg.4775 - eggNOG: COG0445 - HOGENOM: HBG284774 - OMA: GIQFRVL - PhylomeDB: Q110Q9 - ProtClustDB: PRK05192 - BioCyc: TERY203124:TERY_2841-MONOMER - GO: GO:0005737 - HAMAP: MF_00129 - InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 - TIGRFAMs: TIGR00136
Pfam domain/function: PF01134 GIDA
EC number: NA
Molecular weight: Translated: 71660; Mature: 71660
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQTFDFQDEYDIIVVGAGHSGCEAALATARLGCHTLLLTLNLDKIAWQPCNPAVGGPAK CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCEEEEEEEEHHHHCCCCCCCCCCCCCH SQLTHEVDALGGEIGKMADRTYLQKRILNSSRGPAVWALRAQTDKREYATIMRNIVENQE HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCHH NLRVRESMVTDLVLGDNEEIIGVETYFGVAFKCKAVILTTGTFLGGVIWVGNKSMPAGRA HHHHHHHHHHHHEECCCCCEEEEEHHHCEEEEEEEEEEECCHHHCCEEEECCCCCCCCCC GEFSAIGLSETLNKLGFETGRLKTGTPARVDKRSVDYTDLEAQPGDEKVRWFTFDPEVWV CCEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHC EREQMCCYLTRTTPETHKLIRDNLHLSPVYGGWVDAKGPRYCPSIEDKIVRFADKHSHQI CCCCEEEEEECCCCHHHHHHHCCCEECCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCEE FIEPEGRDIPELYIQGFSTGLPEKLQLQMLQSLPGLENCLMLRPAYAVEYDYLPATQCYP EECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHEEECCCCEEEECCCCCCHHHH TLMTKKIEGLFCAGQINGTTGYEEAAAQGLVAGINAVKFVKNEEMIIFPREQSYIGTLID HHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHCCHHEEEECCCCEEEEECCCHHHHHHHH DLCTKDLREPYRMLTSRSEYRLILRSDNADQRLTPLGREIGLIDDRRWELFESKQANINS HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCH EKSRLNSTRIKELDEVAINIVADTHTKIKGSITLADLLRRPGFHYVDLEKYNLGNLDLKL HHHHHHHHHHHHHHHHEEEEEECCCCEEECCEEHHHHHHCCCCEEEEEEECCCCCCEEEE VEKEGAEIDIKYSGYLQRQQNQIDQISRQKNRRLPTNLDYLSISTLSLEAREKLSKVQPL EECCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHHHHCCCC TIGQASRIGGVNPADINALLVYLEVQYRQFQLTSANV CCCCHHHCCCCCCCCCEEEEEEEEEEEEEEEEECCCC >Mature Secondary Structure MNQTFDFQDEYDIIVVGAGHSGCEAALATARLGCHTLLLTLNLDKIAWQPCNPAVGGPAK CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCEEEEEEEEHHHHCCCCCCCCCCCCCH SQLTHEVDALGGEIGKMADRTYLQKRILNSSRGPAVWALRAQTDKREYATIMRNIVENQE HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCHH NLRVRESMVTDLVLGDNEEIIGVETYFGVAFKCKAVILTTGTFLGGVIWVGNKSMPAGRA HHHHHHHHHHHHEECCCCCEEEEEHHHCEEEEEEEEEEECCHHHCCEEEECCCCCCCCCC GEFSAIGLSETLNKLGFETGRLKTGTPARVDKRSVDYTDLEAQPGDEKVRWFTFDPEVWV CCEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHC EREQMCCYLTRTTPETHKLIRDNLHLSPVYGGWVDAKGPRYCPSIEDKIVRFADKHSHQI CCCCEEEEEECCCCHHHHHHHCCCEECCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCEE FIEPEGRDIPELYIQGFSTGLPEKLQLQMLQSLPGLENCLMLRPAYAVEYDYLPATQCYP EECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHEEECCCCEEEECCCCCCHHHH TLMTKKIEGLFCAGQINGTTGYEEAAAQGLVAGINAVKFVKNEEMIIFPREQSYIGTLID HHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHCCHHEEEECCCCEEEEECCCHHHHHHHH DLCTKDLREPYRMLTSRSEYRLILRSDNADQRLTPLGREIGLIDDRRWELFESKQANINS HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCH EKSRLNSTRIKELDEVAINIVADTHTKIKGSITLADLLRRPGFHYVDLEKYNLGNLDLKL HHHHHHHHHHHHHHHHEEEEEECCCCEEECCEEHHHHHHCCCCEEEEEEECCCCCCEEEE VEKEGAEIDIKYSGYLQRQQNQIDQISRQKNRRLPTNLDYLSISTLSLEAREKLSKVQPL EECCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHHHHCCCC TIGQASRIGGVNPADINALLVYLEVQYRQFQLTSANV CCCCHHHCCCCCCCCCEEEEEEEEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA