Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

Click here to switch to the map view.

The map label for this gene is mnmG

Identifier: 113476427

GI number: 113476427

Start: 4415949

End: 4417862

Strand: Reverse

Name: mnmG

Synonym: Tery_2841

Alternate gene names: 113476427

Gene position: 4417862-4415949 (Counterclockwise)

Preceding gene: 113476428

Following gene: 113476426

Centisome position: 57.0

GC content: 40.23

Gene sequence:

>1914_bases
ATGAACCAAACTTTTGACTTCCAAGATGAATACGACATCATCGTAGTAGGCGCAGGCCACTCTGGGTGTGAAGCTGCTCT
CGCTACTGCACGCCTCGGTTGCCACACCCTACTACTAACTCTAAACCTTGACAAAATTGCTTGGCAACCATGTAACCCGG
CTGTTGGGGGACCTGCAAAATCTCAACTTACCCATGAAGTGGATGCCTTGGGTGGAGAAATAGGTAAAATGGCAGACCGC
ACCTACCTGCAAAAACGTATTCTCAATTCTTCTCGCGGACCTGCCGTTTGGGCGTTACGAGCTCAAACCGACAAACGAGA
ATACGCTACCATTATGCGTAACATTGTCGAAAACCAAGAAAACCTCAGAGTTCGCGAAAGTATGGTAACAGACTTAGTTT
TGGGAGATAACGAGGAAATTATTGGAGTTGAAACCTACTTCGGCGTCGCCTTTAAATGTAAAGCTGTCATCCTGACCACA
GGAACTTTCCTTGGTGGAGTTATCTGGGTAGGCAATAAGTCAATGCCTGCGGGCCGCGCCGGAGAATTTTCTGCTATTGG
TCTGAGTGAAACCCTAAATAAACTTGGTTTTGAAACCGGACGACTAAAAACAGGTACTCCTGCCAGAGTTGACAAACGTT
CTGTTGACTACACCGACCTGGAAGCTCAACCAGGAGATGAAAAAGTACGTTGGTTTACCTTCGACCCAGAAGTCTGGGTG
GAAAGAGAACAGATGTGTTGCTACCTGACACGCACTACTCCAGAAACTCACAAGTTAATTCGCGATAATTTGCATTTGTC
TCCTGTTTATGGTGGGTGGGTGGATGCGAAAGGTCCGCGCTATTGTCCGAGTATTGAAGATAAAATTGTCCGGTTTGCGG
ATAAACATAGTCATCAAATATTTATTGAGCCCGAAGGTCGTGATATTCCTGAACTTTATATTCAGGGGTTTTCTACTGGT
TTGCCAGAGAAATTACAACTGCAAATGTTGCAGAGTTTACCTGGTTTAGAAAATTGTTTGATGTTACGACCTGCTTATGC
GGTAGAATATGATTATTTACCTGCTACCCAATGTTATCCGACGTTGATGACTAAGAAAATTGAAGGGTTATTTTGTGCTG
GTCAAATTAATGGTACGACTGGATATGAAGAAGCAGCAGCTCAAGGTCTTGTGGCGGGAATAAATGCAGTTAAATTTGTT
AAGAATGAAGAGATGATTATTTTCCCACGGGAACAAAGTTATATTGGTACTTTAATTGACGATCTATGTACAAAAGATTT
GCGAGAACCCTATCGAATGTTAACTAGTCGTTCGGAATATCGTTTGATTTTACGGTCGGATAATGCTGACCAAAGATTAA
CTCCTTTGGGTAGAGAAATTGGTTTAATTGATGACCGTCGGTGGGAGTTATTTGAGAGTAAACAAGCTAATATTAATTCT
GAAAAATCTAGGTTAAATTCAACTCGAATTAAAGAACTAGATGAGGTTGCTATTAATATAGTCGCTGATACTCATACAAA
AATTAAGGGTTCGATTACTTTAGCAGATCTGTTGCGTAGACCTGGTTTCCATTATGTAGATTTGGAAAAGTATAATCTGG
GGAATTTAGATTTAAAATTAGTTGAAAAAGAGGGCGCAGAAATTGATATTAAATATTCCGGTTATTTGCAAAGACAACAG
AATCAAATTGATCAAATTAGTCGTCAAAAAAATCGTAGGTTACCTACTAATTTAGATTATTTATCTATTTCTACTTTATC
CCTAGAGGCACGGGAAAAATTATCGAAAGTTCAGCCTTTAACTATTGGTCAAGCATCTCGAATTGGTGGAGTAAATCCGG
CGGATATTAATGCTTTATTAGTTTATTTAGAGGTGCAATATCGACAGTTTCAATTAACTTCTGCTAATGTTTAG

Upstream 100 bases:

>100_bases
ATCTCAAGCTTCCCCTTTCAAGGGGATGAAAAAGAAAATTCAGGTTTTCAAGCTTCCGGCTTCAGCGGTCGGCACCGATA
ACTAATAACTGATAACTGAA

Downstream 100 bases:

>100_bases
TTAATGGAAAAGTCAGTCATATGAAGTGAATTTCATATCTGTTGCCCATCTGCTATGTTATACTAATGTTAGACTTTTGG
TGAGGGAATTTAAGGTTTCC

Product: tRNA uridine 5-carboxymethylaminomethyl modification protein GidA

Products: NA

Alternate protein names: Glucose-inhibited division protein A

Number of amino acids: Translated: 637; Mature: 637

Protein sequence:

>637_residues
MNQTFDFQDEYDIIVVGAGHSGCEAALATARLGCHTLLLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDALGGEIGKMADR
TYLQKRILNSSRGPAVWALRAQTDKREYATIMRNIVENQENLRVRESMVTDLVLGDNEEIIGVETYFGVAFKCKAVILTT
GTFLGGVIWVGNKSMPAGRAGEFSAIGLSETLNKLGFETGRLKTGTPARVDKRSVDYTDLEAQPGDEKVRWFTFDPEVWV
EREQMCCYLTRTTPETHKLIRDNLHLSPVYGGWVDAKGPRYCPSIEDKIVRFADKHSHQIFIEPEGRDIPELYIQGFSTG
LPEKLQLQMLQSLPGLENCLMLRPAYAVEYDYLPATQCYPTLMTKKIEGLFCAGQINGTTGYEEAAAQGLVAGINAVKFV
KNEEMIIFPREQSYIGTLIDDLCTKDLREPYRMLTSRSEYRLILRSDNADQRLTPLGREIGLIDDRRWELFESKQANINS
EKSRLNSTRIKELDEVAINIVADTHTKIKGSITLADLLRRPGFHYVDLEKYNLGNLDLKLVEKEGAEIDIKYSGYLQRQQ
NQIDQISRQKNRRLPTNLDYLSISTLSLEAREKLSKVQPLTIGQASRIGGVNPADINALLVYLEVQYRQFQLTSANV

Sequences:

>Translated_637_residues
MNQTFDFQDEYDIIVVGAGHSGCEAALATARLGCHTLLLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDALGGEIGKMADR
TYLQKRILNSSRGPAVWALRAQTDKREYATIMRNIVENQENLRVRESMVTDLVLGDNEEIIGVETYFGVAFKCKAVILTT
GTFLGGVIWVGNKSMPAGRAGEFSAIGLSETLNKLGFETGRLKTGTPARVDKRSVDYTDLEAQPGDEKVRWFTFDPEVWV
EREQMCCYLTRTTPETHKLIRDNLHLSPVYGGWVDAKGPRYCPSIEDKIVRFADKHSHQIFIEPEGRDIPELYIQGFSTG
LPEKLQLQMLQSLPGLENCLMLRPAYAVEYDYLPATQCYPTLMTKKIEGLFCAGQINGTTGYEEAAAQGLVAGINAVKFV
KNEEMIIFPREQSYIGTLIDDLCTKDLREPYRMLTSRSEYRLILRSDNADQRLTPLGREIGLIDDRRWELFESKQANINS
EKSRLNSTRIKELDEVAINIVADTHTKIKGSITLADLLRRPGFHYVDLEKYNLGNLDLKLVEKEGAEIDIKYSGYLQRQQ
NQIDQISRQKNRRLPTNLDYLSISTLSLEAREKLSKVQPLTIGQASRIGGVNPADINALLVYLEVQYRQFQLTSANV
>Mature_637_residues
MNQTFDFQDEYDIIVVGAGHSGCEAALATARLGCHTLLLTLNLDKIAWQPCNPAVGGPAKSQLTHEVDALGGEIGKMADR
TYLQKRILNSSRGPAVWALRAQTDKREYATIMRNIVENQENLRVRESMVTDLVLGDNEEIIGVETYFGVAFKCKAVILTT
GTFLGGVIWVGNKSMPAGRAGEFSAIGLSETLNKLGFETGRLKTGTPARVDKRSVDYTDLEAQPGDEKVRWFTFDPEVWV
EREQMCCYLTRTTPETHKLIRDNLHLSPVYGGWVDAKGPRYCPSIEDKIVRFADKHSHQIFIEPEGRDIPELYIQGFSTG
LPEKLQLQMLQSLPGLENCLMLRPAYAVEYDYLPATQCYPTLMTKKIEGLFCAGQINGTTGYEEAAAQGLVAGINAVKFV
KNEEMIIFPREQSYIGTLIDDLCTKDLREPYRMLTSRSEYRLILRSDNADQRLTPLGREIGLIDDRRWELFESKQANINS
EKSRLNSTRIKELDEVAINIVADTHTKIKGSITLADLLRRPGFHYVDLEKYNLGNLDLKLVEKEGAEIDIKYSGYLQRQQ
NQIDQISRQKNRRLPTNLDYLSISTLSLEAREKLSKVQPLTIGQASRIGGVNPADINALLVYLEVQYRQFQLTSANV

Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34

COG id: COG0445

COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MnmG family

Homologues:

Organism=Homo sapiens, GI74024895, Length=646, Percent_Identity=41.4860681114551, Blast_Score=429, Evalue=1e-120,
Organism=Homo sapiens, GI19882217, Length=663, Percent_Identity=40.1206636500754, Blast_Score=416, Evalue=1e-116,
Organism=Homo sapiens, GI183227703, Length=675, Percent_Identity=39.4074074074074, Blast_Score=410, Evalue=1e-114,
Organism=Escherichia coli, GI2367273, Length=623, Percent_Identity=48.1540930979133, Blast_Score=581, Evalue=1e-167,
Organism=Caenorhabditis elegans, GI17534255, Length=625, Percent_Identity=40.16, Blast_Score=442, Evalue=1e-124,
Organism=Saccharomyces cerevisiae, GI6321202, Length=637, Percent_Identity=42.7001569858713, Blast_Score=466, Evalue=1e-132,
Organism=Drosophila melanogaster, GI24658174, Length=634, Percent_Identity=41.0094637223975, Blast_Score=437, Evalue=1e-122,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MNMG_TRIEI (Q110Q9)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_722488.1
- ProteinModelPortal:   Q110Q9
- SMR:   Q110Q9
- STRING:   Q110Q9
- GeneID:   4245144
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_2841
- NMPDR:   fig|203124.1.peg.4775
- eggNOG:   COG0445
- HOGENOM:   HBG284774
- OMA:   GIQFRVL
- PhylomeDB:   Q110Q9
- ProtClustDB:   PRK05192
- BioCyc:   TERY203124:TERY_2841-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00129
- InterPro:   IPR004416
- InterPro:   IPR002218
- InterPro:   IPR020595
- TIGRFAMs:   TIGR00136

Pfam domain/function: PF01134 GIDA

EC number: NA

Molecular weight: Translated: 71660; Mature: 71660

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQTFDFQDEYDIIVVGAGHSGCEAALATARLGCHTLLLTLNLDKIAWQPCNPAVGGPAK
CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCEEEEEEEEHHHHCCCCCCCCCCCCCH
SQLTHEVDALGGEIGKMADRTYLQKRILNSSRGPAVWALRAQTDKREYATIMRNIVENQE
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCHH
NLRVRESMVTDLVLGDNEEIIGVETYFGVAFKCKAVILTTGTFLGGVIWVGNKSMPAGRA
HHHHHHHHHHHHEECCCCCEEEEEHHHCEEEEEEEEEEECCHHHCCEEEECCCCCCCCCC
GEFSAIGLSETLNKLGFETGRLKTGTPARVDKRSVDYTDLEAQPGDEKVRWFTFDPEVWV
CCEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHC
EREQMCCYLTRTTPETHKLIRDNLHLSPVYGGWVDAKGPRYCPSIEDKIVRFADKHSHQI
CCCCEEEEEECCCCHHHHHHHCCCEECCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCEE
FIEPEGRDIPELYIQGFSTGLPEKLQLQMLQSLPGLENCLMLRPAYAVEYDYLPATQCYP
EECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHEEECCCCEEEECCCCCCHHHH
TLMTKKIEGLFCAGQINGTTGYEEAAAQGLVAGINAVKFVKNEEMIIFPREQSYIGTLID
HHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHCCHHEEEECCCCEEEEECCCHHHHHHHH
DLCTKDLREPYRMLTSRSEYRLILRSDNADQRLTPLGREIGLIDDRRWELFESKQANINS
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCH
EKSRLNSTRIKELDEVAINIVADTHTKIKGSITLADLLRRPGFHYVDLEKYNLGNLDLKL
HHHHHHHHHHHHHHHHEEEEEECCCCEEECCEEHHHHHHCCCCEEEEEEECCCCCCEEEE
VEKEGAEIDIKYSGYLQRQQNQIDQISRQKNRRLPTNLDYLSISTLSLEAREKLSKVQPL
EECCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHHHHCCCC
TIGQASRIGGVNPADINALLVYLEVQYRQFQLTSANV
CCCCHHHCCCCCCCCCEEEEEEEEEEEEEEEEECCCC
>Mature Secondary Structure
MNQTFDFQDEYDIIVVGAGHSGCEAALATARLGCHTLLLTLNLDKIAWQPCNPAVGGPAK
CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCEEEEEEEEHHHHCCCCCCCCCCCCCH
SQLTHEVDALGGEIGKMADRTYLQKRILNSSRGPAVWALRAQTDKREYATIMRNIVENQE
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCHH
NLRVRESMVTDLVLGDNEEIIGVETYFGVAFKCKAVILTTGTFLGGVIWVGNKSMPAGRA
HHHHHHHHHHHHEECCCCCEEEEEHHHCEEEEEEEEEEECCHHHCCEEEECCCCCCCCCC
GEFSAIGLSETLNKLGFETGRLKTGTPARVDKRSVDYTDLEAQPGDEKVRWFTFDPEVWV
CCEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHC
EREQMCCYLTRTTPETHKLIRDNLHLSPVYGGWVDAKGPRYCPSIEDKIVRFADKHSHQI
CCCCEEEEEECCCCHHHHHHHCCCEECCCCCCEECCCCCCCCCCHHHHHHHHHCCCCCEE
FIEPEGRDIPELYIQGFSTGLPEKLQLQMLQSLPGLENCLMLRPAYAVEYDYLPATQCYP
EECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHEEECCCCEEEECCCCCCHHHH
TLMTKKIEGLFCAGQINGTTGYEEAAAQGLVAGINAVKFVKNEEMIIFPREQSYIGTLID
HHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHCCHHEEEECCCCEEEEECCCHHHHHHHH
DLCTKDLREPYRMLTSRSEYRLILRSDNADQRLTPLGREIGLIDDRRWELFESKQANINS
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCH
EKSRLNSTRIKELDEVAINIVADTHTKIKGSITLADLLRRPGFHYVDLEKYNLGNLDLKL
HHHHHHHHHHHHHHHHEEEEEECCCCEEECCEEHHHHHHCCCCEEEEEEECCCCCCEEEE
VEKEGAEIDIKYSGYLQRQQNQIDQISRQKNRRLPTNLDYLSISTLSLEAREKLSKVQPL
EECCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEHHHHHHHHHCCCC
TIGQASRIGGVNPADINALLVYLEVQYRQFQLTSANV
CCCCHHHCCCCCCCCCEEEEEEEEEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA