Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is yajQ [C]

Identifier: 113476339

GI number: 113476339

Start: 4249660

End: 4250151

Strand: Reverse

Name: yajQ [C]

Synonym: Tery_2743

Alternate gene names: 113476339

Gene position: 4250151-4249660 (Counterclockwise)

Preceding gene: 113476340

Following gene: 113476336

Centisome position: 54.84

GC content: 32.11

Gene sequence:

>492_bases
ATGGCATCTACATCATCATTTGATATAGTCAGCGATTTTGATAGGCAAGAATTAGTTAATGCTATAGACCAAGCAGAGCG
AGAAATTAAAGCTCGCTACGACTTGAAAGATTCTAATACATCATTAGAATTAGGCGAAGATACAATTACGATTAATACTA
GTAGTCAATTTAGTTTAGATGCGGTTCATACTGTGTTACAAACTAAAGCAGCTAAACGGAATTTATCTTTAAAAATATTT
GATTTTGGTAAAGTCGAATCTGCTAGTGGCAATAGAGTTAGGCAAGAAGTTAAATTACAAAAAGGCATTAGCCAAGAAAA
TGCTAAAAAAATTACTAAGTTGATTAAGGATGAATTTAAAAAAGTTCAATCATCTATTCAAGGTGATGCCGTTAGAGTTT
CTGCTAAGTCTAAAGATGAATTACAAGCAGTAATGCAAAGATTAAAAGCAGAAGATTTTCCCATGCCATTGCAATTTACT
AACTATCGTTGA

Upstream 100 bases:

>100_bases
CTGGTACAGCTATTTTGTTTATTCTCAGTTTAATTAGTGCCAATAATTTTTAGTAAACCTTGTTTTATTAGGTAAAATCA
AAATAATAGATGAAAAAATT

Downstream 100 bases:

>100_bases
GTAGAAAAGAAGGAGTAGGTTGCAGGTAGGGACGTTTTATGGAATGTCCCTACAGGGTAACGGAAAAAATTTGATGATTT
ATGAGCGATAATTTGTTTTA

Product: putative nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MASTSSFDIVSDFDRQELVNAIDQAEREIKARYDLKDSNTSLELGEDTITINTSSQFSLDAVHTVLQTKAAKRNLSLKIF
DFGKVESASGNRVRQEVKLQKGISQENAKKITKLIKDEFKKVQSSIQGDAVRVSAKSKDELQAVMQRLKAEDFPMPLQFT
NYR

Sequences:

>Translated_163_residues
MASTSSFDIVSDFDRQELVNAIDQAEREIKARYDLKDSNTSLELGEDTITINTSSQFSLDAVHTVLQTKAAKRNLSLKIF
DFGKVESASGNRVRQEVKLQKGISQENAKKITKLIKDEFKKVQSSIQGDAVRVSAKSKDELQAVMQRLKAEDFPMPLQFT
NYR
>Mature_162_residues
ASTSSFDIVSDFDRQELVNAIDQAEREIKARYDLKDSNTSLELGEDTITINTSSQFSLDAVHTVLQTKAAKRNLSLKIFD
FGKVESASGNRVRQEVKLQKGISQENAKKITKLIKDEFKKVQSSIQGDAVRVSAKSKDELQAVMQRLKAEDFPMPLQFTN
YR

Specific function: Unknown

COG id: COG1666

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0234 family

Homologues:

Organism=Escherichia coli, GI87081737, Length=160, Percent_Identity=41.25, Blast_Score=117, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2743_TRIEI (Q110Z7)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_722400.1
- ProteinModelPortal:   Q110Z7
- SMR:   Q110Z7
- STRING:   Q110Z7
- GeneID:   4244776
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_2743
- NMPDR:   fig|203124.1.peg.3205
- eggNOG:   COG1666
- HOGENOM:   HBG290634
- OMA:   LQFTNYR
- PhylomeDB:   Q110Z7
- ProtClustDB:   PRK05412
- BioCyc:   TERY203124:TERY_2743-MONOMER
- HAMAP:   MF_00632
- InterPro:   IPR007551

Pfam domain/function: PF04461 DUF520

EC number: NA

Molecular weight: Translated: 18377; Mature: 18246

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASTSSFDIVSDFDRQELVNAIDQAEREIKARYDLKDSNTSLELGEDTITINTSSQFSLD
CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEECCCCCHHH
AVHTVLQTKAAKRNLSLKIFDFGKVESASGNRVRQEVKLQKGISQENAKKITKLIKDEFK
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KVQSSIQGDAVRVSAKSKDELQAVMQRLKAEDFPMPLQFTNYR
HHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCEECCCC
>Mature Secondary Structure 
ASTSSFDIVSDFDRQELVNAIDQAEREIKARYDLKDSNTSLELGEDTITINTSSQFSLD
CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEECCCCCHHH
AVHTVLQTKAAKRNLSLKIFDFGKVESASGNRVRQEVKLQKGISQENAKKITKLIKDEFK
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
KVQSSIQGDAVRVSAKSKDELQAVMQRLKAEDFPMPLQFTNYR
HHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA