| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113476282
Identifier: 113476282
GI number: 113476282
Start: 4149868
End: 4150152
Strand: Reverse
Name: 113476282
Synonym: Tery_2680
Alternate gene names: NA
Gene position: 4150152-4149868 (Counterclockwise)
Preceding gene: 113476289
Following gene: 113476281
Centisome position: 53.55
GC content: 32.28
Gene sequence:
>285_bases TTGCTTATTGTACTAGGGTCTGGAATTTTTGGTTACCTTTTATATTATGATACTACTGCTAGTGAACTATCTACTAGTAA TATCTCTAATTCTACCACTTCTCCATTAATCTCAAAGACAAAATTAGTTCTTTCTTTCTTTGTTCTCTCAGCGTTCTTGG TTTTGTATTTAGTTCCACTTCCTTTTTTGGAAAATACTAGTCTAGCTAAACTTTTTATGGTTTTTTCAGGGATGAGCCTA ACTTTGTTTGGTGGTGGTTATGTTTTCATTCCTATGATTCAATAG
Upstream 100 bases:
>100_bases GAGTAAAAAAACAATTAGAACACTTAAAAATTGGCAGTCTATTTCAATTGCCGTTGCCGCCTTCATCATTCTCAAGTTTG TATAAGGATTTTACACAACT
Downstream 100 bases:
>100_bases ACTGTTATCAATACTTATGGATGGGTAACCCAAACATAATTTGCCAGTGCGATCGCTTTAAGTCAAATAACACCTGGTCC CATGCTCATTAGTGCGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MLIVLGSGIFGYLLYYDTTASELSTSNISNSTTSPLISKTKLVLSFFVLSAFLVLYLVPLPFLENTSLAKLFMVFSGMSL TLFGGGYVFIPMIQ
Sequences:
>Translated_94_residues MLIVLGSGIFGYLLYYDTTASELSTSNISNSTTSPLISKTKLVLSFFVLSAFLVLYLVPLPFLENTSLAKLFMVFSGMSL TLFGGGYVFIPMIQ >Mature_94_residues MLIVLGSGIFGYLLYYDTTASELSTSNISNSTTSPLISKTKLVLSFFVLSAFLVLYLVPLPFLENTSLAKLFMVFSGMSL TLFGGGYVFIPMIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10263; Mature: 10263
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIVLGSGIFGYLLYYDTTASELSTSNISNSTTSPLISKTKLVLSFFVLSAFLVLYLVPL CEEEECCCHHEEHEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC PFLENTSLAKLFMVFSGMSLTLFGGGYVFIPMIQ CCCCCCHHHHHHHHHCCCEEEEECCCEEEEEECC >Mature Secondary Structure MLIVLGSGIFGYLLYYDTTASELSTSNISNSTTSPLISKTKLVLSFFVLSAFLVLYLVPL CEEEECCCHHEEHEEECCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC PFLENTSLAKLFMVFSGMSLTLFGGGYVFIPMIQ CCCCCCHHHHHHHHHCCCEEEEECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA