Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113476120
Identifier: 113476120
GI number: 113476120
Start: 3860392
End: 3861360
Strand: Reverse
Name: 113476120
Synonym: Tery_2501
Alternate gene names: NA
Gene position: 3861360-3860392 (Counterclockwise)
Preceding gene: 113476121
Following gene: 113476119
Centisome position: 49.82
GC content: 39.01
Gene sequence:
>969_bases ATGAAAAAATTAAATGTTTTAGGAATTGATGGCGGCGGAACGAAAACAGAAGCGGTTTTAATGGATGAAAATTGTCAAGT TCTTGGTAGTGGCAAAAGCGGTCCGTCAAATTATCACAGTGTAGGAATTGAAGTAGCAAAAAATTCGATTCAAACTGCTA TTACTCAAGCAGTTGCTAATAGTAATAGTTATCAACCAATCTCTGGAATTTGCCTGGGTTTAGCAGGAGTGGGAAGACCT GAAGATTTTTTAGTGGTAGAAAGTCTTCTCAAAGAAATTATGATGGATATTCCGATCAAATGGGATTTACAGCCAAATAC TGTAGTTATTTGTAGCGACAGCAATATCGCTTTGGTGGGAGGTCTTGGATGTTCTGTAGGTATTGTGGCGATCGCTGGTA CGGGTTCCCTAGTATTTGGCCAGAATAGTCATGGCTTAACTAAGCGGGTTGGTGGTTGGGGTTATCTTTTGGGAGATGAA GGTAGTGGTTATAATATAGCTATTAGAGGTTTACAGGCGGCTTTGAAAAGTTATGATGGACGTGAGTCTCCGACTATTTT GGTTACAGATTTTACTAGATACTTAGGCCTGAAAAATATTGAGGGTATTATAGAAATAATATATCGCCGTAGATGGGATG TAACACGGATAGCTGCACTTGCTCCCATTGTCTCGGCTGCCGCAGATAAGGAAGATAAGGTAGCTAAAAAAATTATTCAG GGTGCTGTGGAGGAGTTAAGTAAAGCTACAAAAATTGTGATATCTACCTTATTTCAGGTTCACGAAATTTTTGAAGTGGT TACTATTGGAAGTGTCTGGAATAGTATGATTAACTTTCGCGGTCAGTTTGAAGATTCTATAGCAGCGATCGCTCCTACTG CTCAAGTTATTTGGCCTAAACATGAGCCTGTTTATGGGGCAGCTATTTTAGCTTTAAAAGCTATAAAAGCGATAAAAGCT CAAAGTTAA
Upstream 100 bases:
>100_bases AACCCTACTGAATAGTAAAGTATGATTTTTGTCAAGAGTTAGTTTTATACTAAAGTTCTTCCTGTCTATAAAGTGGATGG GTAGATAATAATTGTAGAAT
Downstream 100 bases:
>100_bases CATGTAGCTATTGGGCCTGTAGCAATTCCTAAAACTCTTTTCTTGCTGAGGGTGATGGGAAAATGGGGCTGGGGGAAATA GCGATCGCTGCTCTTTCCTG
Product: BadF/BadG/BcrA/BcrD type ATPase
Products: NA
Alternate protein names: N-Acetylglucosamine Kinase; BadF/BadG/BcrA/BcrD ATPase Family Protein; BadF/BadG/BcrA/BcrD Family ATPase; BadF/BadG/BcrA/BcrD Type ATPase; ATPase Family Protein; BadF/BadG/BcrA/BcrD ATPase Family Superfamily; BadF/BadG/BcrA/BcrD ATPase Family; N-Acetylglucosamine Kinase Protein; ATPase Badf/Badg/Bcra/Bcrd Type; Kinase; Oxidoreductase; Xylulose Kinase Related Protein; Acyl-CoA Reductase/Dehydratase; N-Acetylglucosamine Kinase
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MKKLNVLGIDGGGTKTEAVLMDENCQVLGSGKSGPSNYHSVGIEVAKNSIQTAITQAVANSNSYQPISGICLGLAGVGRP EDFLVVESLLKEIMMDIPIKWDLQPNTVVICSDSNIALVGGLGCSVGIVAIAGTGSLVFGQNSHGLTKRVGGWGYLLGDE GSGYNIAIRGLQAALKSYDGRESPTILVTDFTRYLGLKNIEGIIEIIYRRRWDVTRIAALAPIVSAAADKEDKVAKKIIQ GAVEELSKATKIVISTLFQVHEIFEVVTIGSVWNSMINFRGQFEDSIAAIAPTAQVIWPKHEPVYGAAILALKAIKAIKA QS
Sequences:
>Translated_322_residues MKKLNVLGIDGGGTKTEAVLMDENCQVLGSGKSGPSNYHSVGIEVAKNSIQTAITQAVANSNSYQPISGICLGLAGVGRP EDFLVVESLLKEIMMDIPIKWDLQPNTVVICSDSNIALVGGLGCSVGIVAIAGTGSLVFGQNSHGLTKRVGGWGYLLGDE GSGYNIAIRGLQAALKSYDGRESPTILVTDFTRYLGLKNIEGIIEIIYRRRWDVTRIAALAPIVSAAADKEDKVAKKIIQ GAVEELSKATKIVISTLFQVHEIFEVVTIGSVWNSMINFRGQFEDSIAAIAPTAQVIWPKHEPVYGAAILALKAIKAIKA QS >Mature_322_residues MKKLNVLGIDGGGTKTEAVLMDENCQVLGSGKSGPSNYHSVGIEVAKNSIQTAITQAVANSNSYQPISGICLGLAGVGRP EDFLVVESLLKEIMMDIPIKWDLQPNTVVICSDSNIALVGGLGCSVGIVAIAGTGSLVFGQNSHGLTKRVGGWGYLLGDE GSGYNIAIRGLQAALKSYDGRESPTILVTDFTRYLGLKNIEGIIEIIYRRRWDVTRIAALAPIVSAAADKEDKVAKKIIQ GAVEELSKATKIVISTLFQVHEIFEVVTIGSVWNSMINFRGQFEDSIAAIAPTAQVIWPKHEPVYGAAILALKAIKAIKA QS
Specific function: Unknown
COG id: COG2971
COG function: function code G; Predicted N-acetylglucosamine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI295844834, Length=280, Percent_Identity=27.1428571428571, Blast_Score=82, Evalue=8e-16, Organism=Drosophila melanogaster, GI24647113, Length=280, Percent_Identity=24.2857142857143, Blast_Score=78, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34252; Mature: 34252
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLNVLGIDGGGTKTEAVLMDENCQVLGSGKSGPSNYHSVGIEVAKNSIQTAITQAVAN CCCEEEEEECCCCCCEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC SNSYQPISGICLGLAGVGRPEDFLVVESLLKEIMMDIPIKWDLQPNTVVICSDSNIALVG CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCEEEEE GLGCSVGIVAIAGTGSLVFGQNSHGLTKRVGGWGYLLGDEGSGYNIAIRGLQAALKSYDG CCCCCEEEEEEECCCEEEECCCCCCCHHHCCCEEEEECCCCCCCEEEEHHHHHHHHHCCC RESPTILVTDFTRYLGLKNIEGIIEIIYRRRWDVTRIAALAPIVSAAADKEDKVAKKIIQ CCCCEEEEECHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH GAVEELSKATKIVISTLFQVHEIFEVVTIGSVWNSMINFRGQFEDSIAAIAPTAQVIWPK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEECCC HEPVYGAAILALKAIKAIKAQS CCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKLNVLGIDGGGTKTEAVLMDENCQVLGSGKSGPSNYHSVGIEVAKNSIQTAITQAVAN CCCEEEEEECCCCCCEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC SNSYQPISGICLGLAGVGRPEDFLVVESLLKEIMMDIPIKWDLQPNTVVICSDSNIALVG CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCEEEEECCCCEEEEE GLGCSVGIVAIAGTGSLVFGQNSHGLTKRVGGWGYLLGDEGSGYNIAIRGLQAALKSYDG CCCCCEEEEEEECCCEEEECCCCCCCHHHCCCEEEEECCCCCCCEEEEHHHHHHHHHCCC RESPTILVTDFTRYLGLKNIEGIIEIIYRRRWDVTRIAALAPIVSAAADKEDKVAKKIIQ CCCCEEEEECHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH GAVEELSKATKIVISTLFQVHEIFEVVTIGSVWNSMINFRGQFEDSIAAIAPTAQVIWPK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEECCC HEPVYGAAILALKAIKAIKAQS CCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA