| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is aroH [H]
Identifier: 113476112
GI number: 113476112
Start: 3842056
End: 3842433
Strand: Reverse
Name: aroH [H]
Synonym: Tery_2493
Alternate gene names: 113476112
Gene position: 3842433-3842056 (Counterclockwise)
Preceding gene: 113476113
Following gene: 113476111
Centisome position: 49.58
GC content: 37.04
Gene sequence:
>378_bases GTGGTGTGGCGAGTTCAAGCAATTCGTGGAGCAACTACAGTCTCAGAAAATTCTGTAGAGGCAATTCGAGAGGCAGTGAA TGAATTACTAAATGAGCTAGAAAAAAAGAATGATTTTGATCTAGAGCAAGTTATTAGTGCAACTTTCTCTGTGACTCATG ACTTAGATGCTATTTTTCCAGCAGCGATCGCCCGCCAACGTCCCAACTGGAATAATATACCTTTATTAGATGTGCAGCAA ATGTATGTTAAAGGTAGTTTAAAACGTTGTATTAGATTTTTAATTTATATCAACATGCCGGAAGCTAACCCAAAAAAAAT TGTGCATACCTATTTACGAGAGGCAAAAAATTTGAGACCTGACTTGGTAAATGGATAA
Upstream 100 bases:
>100_bases CAAAGCTGGGTGGAATTTGAAGTTTCTACCAGTGGCTTACCTTTGTGGCTGTATCGACCTTAAATTTAACTATAAAGCTT TTAATGGGGAGGATTTTAGT
Downstream 100 bases:
>100_bases GAAAAAAATATCCCCTCCGTAAACCGGAGTAAGAAGAGAAGGAGTGCAGCTAGTGTTGTAGAAGATAAACCATGACACAA AAACTATCATCAGAAAAATT
Product: chorismate mutase
Products: NA
Alternate protein names: CM [H]
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MVWRVQAIRGATTVSENSVEAIREAVNELLNELEKKNDFDLEQVISATFSVTHDLDAIFPAAIARQRPNWNNIPLLDVQQ MYVKGSLKRCIRFLIYINMPEANPKKIVHTYLREAKNLRPDLVNG
Sequences:
>Translated_125_residues MVWRVQAIRGATTVSENSVEAIREAVNELLNELEKKNDFDLEQVISATFSVTHDLDAIFPAAIARQRPNWNNIPLLDVQQ MYVKGSLKRCIRFLIYINMPEANPKKIVHTYLREAKNLRPDLVNG >Mature_125_residues MVWRVQAIRGATTVSENSVEAIREAVNELLNELEKKNDFDLEQVISATFSVTHDLDAIFPAAIARQRPNWNNIPLLDVQQ MYVKGSLKRCIRFLIYINMPEANPKKIVHTYLREAKNLRPDLVNG
Specific function: Unknown
COG id: COG4401
COG function: function code E; Chorismate mutase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 chorismate mutase aroH-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008243 - InterPro: IPR013813 - ProDom: PD031888 [H]
Pfam domain/function: PF07736 CM_1 [H]
EC number: =5.4.99.5 [H]
Molecular weight: Translated: 14348; Mature: 14348
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVWRVQAIRGATTVSENSVEAIREAVNELLNELEKKNDFDLEQVISATFSVTHDLDAIFP CCEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH AAIARQRPNWNNIPLLDVQQMYVKGSLKRCIRFLIYINMPEANPKKIVHTYLREAKNLRP HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC DLVNG CCCCC >Mature Secondary Structure MVWRVQAIRGATTVSENSVEAIREAVNELLNELEKKNDFDLEQVISATFSVTHDLDAIFP CCEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH AAIARQRPNWNNIPLLDVQQMYVKGSLKRCIRFLIYINMPEANPKKIVHTYLREAKNLRP HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC DLVNG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2105742; 9384377; 8471608; 8378335; 8046752; 10818343 [H]