| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is hisI [H]
Identifier: 113476109
GI number: 113476109
Start: 3836241
End: 3836726
Strand: Reverse
Name: hisI [H]
Synonym: Tery_2490
Alternate gene names: 113476109
Gene position: 3836726-3836241 (Counterclockwise)
Preceding gene: 113476110
Following gene: 113476108
Centisome position: 49.51
GC content: 42.8
Gene sequence:
>486_bases ATGAATCCCCTATTTAGTACCAGAAATTCAGTAGAACAAGTAGAAGAAGGTTTGCTCCTTGCTCCCAAATTTGACTGCAA TGGTTTGATTCCAGTCGTTACCACCGATGCCAACACGGGTGAAGTGCTGATGCACGCTTATATGAACGAAGAGGCTTTAG TTAAAACCATTGAAACGGGAGAAGGTCACTATTACAGTCGCAGTCGTCAGCAACTATGGCATAAAGGTCAATCTAGTGGA CTGGTGCAAAAAGTACAGCAGTTAGCTATTGATGACGACCAAGATTGTCTGTGGATGCAGGTTGAAGTAGCTGGTTCGGG AGCTAGTTGTCACGTGGGTTATCGTTCTTGTTTTTATCGCTGTATTCCTACGGGAAAAAGTGCTATTGATTCCCAAGAAC CAATTCAGTTAACTTTTACCGAAACGGAGAAAACTTTTGACCCGAAAACAGTGTATGGTAATGCTCCCAACCCAACACAA TTGTAA
Upstream 100 bases:
>100_bases AATGATTTGAGCGATCTATGACCGTCTAACTATATTGCTTTACAATTAGTTGGGATACTTCACAGGATAATGATTATTAA AATTGAAAAGTTGAGCTAAT
Downstream 100 bases:
>100_bases ATTTACTTCAATCCTTTAACACCTATAGGAATTACGCAAATGCACTATATATAACATATAGTGCATTATTAACAGGGCGA TCGCTACTTTTTTTTTCAGC
Product: phosphoribosyl-AMP cyclohydrolase
Products: NA
Alternate protein names: PRA-CH [H]
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MNPLFSTRNSVEQVEEGLLLAPKFDCNGLIPVVTTDANTGEVLMHAYMNEEALVKTIETGEGHYYSRSRQQLWHKGQSSG LVQKVQQLAIDDDQDCLWMQVEVAGSGASCHVGYRSCFYRCIPTGKSAIDSQEPIQLTFTETEKTFDPKTVYGNAPNPTQ L
Sequences:
>Translated_161_residues MNPLFSTRNSVEQVEEGLLLAPKFDCNGLIPVVTTDANTGEVLMHAYMNEEALVKTIETGEGHYYSRSRQQLWHKGQSSG LVQKVQQLAIDDDQDCLWMQVEVAGSGASCHVGYRSCFYRCIPTGKSAIDSQEPIQLTFTETEKTFDPKTVYGNAPNPTQ L >Mature_161_residues MNPLFSTRNSVEQVEEGLLLAPKFDCNGLIPVVTTDANTGEVLMHAYMNEEALVKTIETGEGHYYSRSRQQLWHKGQSSG LVQKVQQLAIDDDQDCLWMQVEVAGSGASCHVGYRSCFYRCIPTGKSAIDSQEPIQLTFTETEKTFDPKTVYGNAPNPTQ L
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0139
COG function: function code E; Phosphoribosyl-AMP cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PRA-CH family [H]
Homologues:
Organism=Escherichia coli, GI2367128, Length=92, Percent_Identity=46.7391304347826, Blast_Score=82, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6319819, Length=72, Percent_Identity=43.0555555555556, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002496 - ProDom: PD002610 [H]
Pfam domain/function: PF01502 PRA-CH [H]
EC number: =3.5.4.19 [H]
Molecular weight: Translated: 17892; Mature: 17892
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPLFSTRNSVEQVEEGLLLAPKFDCNGLIPVVTTDANTGEVLMHAYMNEEALVKTIETG CCCCCCCHHHHHHHHCCEEECCCCCCCCEEEEEEECCCCCHHHHHHHCCCHHHEEEEECC EGHYYSRSRQQLWHKGQSSGLVQKVQQLAIDDDQDCLWMQVEVAGSGASCHVGYRSCFYR CCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEECHHHHHHH CIPTGKSAIDSQEPIQLTFTETEKTFDPKTVYGNAPNPTQL HCCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCC >Mature Secondary Structure MNPLFSTRNSVEQVEEGLLLAPKFDCNGLIPVVTTDANTGEVLMHAYMNEEALVKTIETG CCCCCCCHHHHHHHHCCEEECCCCCCCCEEEEEEECCCCCHHHHHHHCCCHHHEEEEECC EGHYYSRSRQQLWHKGQSSGLVQKVQQLAIDDDQDCLWMQVEVAGSGASCHVGYRSCFYR CCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEECHHHHHHH CIPTGKSAIDSQEPIQLTFTETEKTFDPKTVYGNAPNPTQL HCCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA