Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476108

Identifier: 113476108

GI number: 113476108

Start: 3835659

End: 3835883

Strand: Reverse

Name: 113476108

Synonym: Tery_2489

Alternate gene names: NA

Gene position: 3835883-3835659 (Counterclockwise)

Preceding gene: 113476109

Following gene: 113476107

Centisome position: 49.49

GC content: 37.78

Gene sequence:

>225_bases
ATGATTATGATTGCTTACATCTTGGAAGCTGTCGATAATTATTATCCAACAACAGAGATTTTATTGTTGCTGGAGTCTTT
CTATGGAGCAATGTTCTTTTACTTGAAAAACCTACCCATTACACCATCTCAATGCTACGAGCAAGTACATAAAACCTGGG
ATGAATTCCAGCTAGGAGTTAGTACTTGGCAAGACGAACAACTTCCAATAACCTGTCAGAACTGA

Upstream 100 bases:

>100_bases
AGTTGGCAGAGAATCATTTAAAATCCATTTTGTCAGACGTTCTCGCCTTTGCCATTCCTGAATGCCTGGTTAGCGGCTCC
TGACACTGCAATTTTGCCCC

Downstream 100 bases:

>100_bases
GTTCTGAATAAACTGGTGATTTTGGAACAGTTCATTCTCTAGAGACTGGCGATGAAGGTTGAATATTTCTCAAAATGGAA
TAGTATGAACTGCTTAGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MIMIAYILEAVDNYYPTTEILLLLESFYGAMFFYLKNLPITPSQCYEQVHKTWDEFQLGVSTWQDEQLPITCQN

Sequences:

>Translated_74_residues
MIMIAYILEAVDNYYPTTEILLLLESFYGAMFFYLKNLPITPSQCYEQVHKTWDEFQLGVSTWQDEQLPITCQN
>Mature_74_residues
MIMIAYILEAVDNYYPTTEILLLLESFYGAMFFYLKNLPITPSQCYEQVHKTWDEFQLGVSTWQDEQLPITCQN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8761; Mature: 8761

Theoretical pI: Translated: 3.81; Mature: 3.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMIAYILEAVDNYYPTTEILLLLESFYGAMFFYLKNLPITPSQCYEQVHKTWDEFQLGV
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
STWQDEQLPITCQN
CCCCCCCCCEEECC
>Mature Secondary Structure
MIMIAYILEAVDNYYPTTEILLLLESFYGAMFFYLKNLPITPSQCYEQVHKTWDEFQLGV
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
STWQDEQLPITCQN
CCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA