Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
---|---|
Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is yfcG [H]
Identifier: 113476067
GI number: 113476067
Start: 3761094
End: 3761813
Strand: Reverse
Name: yfcG [H]
Synonym: Tery_2440
Alternate gene names: 113476067
Gene position: 3761813-3761094 (Counterclockwise)
Preceding gene: 113476070
Following gene: 113476066
Centisome position: 48.54
GC content: 41.39
Gene sequence:
>720_bases ATGTCAACACAACCTGATATTCATCTTTACACAGCATCCACCATGAATGGTTGGAAGCCTTTAATTTTTCTTGAAGAAGC AGAAGTCGAATACAACCTAACACCCATCGACTTTAGCAAAAAGGATCAGAAATCTGAGTGGTATATGAAGCTTAACCCCA ATGGACGCATCCCAACTATCGTAGATCTTAGCAATGATAATTTTGTCGTCTTCGAGTCTGGTGCAATTCTTTGGTATCTA GCGGAAAAGTACGGAAAATTCCTTCCCAAAGAAGAAAAATCCCGCTCCCAAGCACTTCAGTGGTTAATGTTTCAGATGGG TGGTGTTGGCCCAATGATGGGTCAGGCTATGTACTTCCAAAGGATTGCTGAACCTCAAGGACATCATGAAGAATTTTCAA TCAAGCGATATGTCCAAGAGTCACGTAGACTACTCGAAGTTTTAGATAAGCAACTTGAAGGTAAAACCTACTTGCTTGGA GATGAGTTTAGCATTGCAGATATAGCTACTTATCCTTGGGCACGCTCCTACTACTGGGCTAAAGTATCAGTAGATGGACT AGAAAATCTTCAAGCTTGGTTTGAATGTATTGACAACAGACCTAGAACTCAACGGGCACTTGAAATCCCTAAACCATTTC CTGCATTTTTTGGTAAGGGGGATGTCGCGACTGCGGAAAGTGCTAATGCTGATCGCTTTAAAACTGATGTCAAATCTTAG
Upstream 100 bases:
>100_bases CTCACCGATAGAAAATCTTTCTAGGATTGTATAAATTTTTAGAAAGGGATACTAGGTTTCTATTTTTGTTAATATAATCA ATAAGCTTAAAGGAGATATA
Downstream 100 bases:
>100_bases TAAGTTAAGTAAATATGTATTGAAATTCTCAGCTATCTAACTAAATCTAAATCCATTTAACTCACAACCCAGGTAAAAAA AGAGTTATAGCAATCGAACA
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: GST-like protein yfcG [H]
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MSTQPDIHLYTASTMNGWKPLIFLEEAEVEYNLTPIDFSKKDQKSEWYMKLNPNGRIPTIVDLSNDNFVVFESGAILWYL AEKYGKFLPKEEKSRSQALQWLMFQMGGVGPMMGQAMYFQRIAEPQGHHEEFSIKRYVQESRRLLEVLDKQLEGKTYLLG DEFSIADIATYPWARSYYWAKVSVDGLENLQAWFECIDNRPRTQRALEIPKPFPAFFGKGDVATAESANADRFKTDVKS
Sequences:
>Translated_239_residues MSTQPDIHLYTASTMNGWKPLIFLEEAEVEYNLTPIDFSKKDQKSEWYMKLNPNGRIPTIVDLSNDNFVVFESGAILWYL AEKYGKFLPKEEKSRSQALQWLMFQMGGVGPMMGQAMYFQRIAEPQGHHEEFSIKRYVQESRRLLEVLDKQLEGKTYLLG DEFSIADIATYPWARSYYWAKVSVDGLENLQAWFECIDNRPRTQRALEIPKPFPAFFGKGDVATAESANADRFKTDVKS >Mature_238_residues STQPDIHLYTASTMNGWKPLIFLEEAEVEYNLTPIDFSKKDQKSEWYMKLNPNGRIPTIVDLSNDNFVVFESGAILWYLA EKYGKFLPKEEKSRSQALQWLMFQMGGVGPMMGQAMYFQRIAEPQGHHEEFSIKRYVQESRRLLEVLDKQLEGKTYLLGD EFSIADIATYPWARSYYWAKVSVDGLENLQAWFECIDNRPRTQRALEIPKPFPAFFGKGDVATAESANADRFKTDVKS
Specific function: Has disulfide bond reductase activity (in vitro). Has low hydroperoxidase activity with cumene hydroperoxide. Has very low glutathione-S-transferase activity (in vitro) [H]
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788640, Length=205, Percent_Identity=43.4146341463415, Blast_Score=162, Evalue=3e-41, Organism=Escherichia coli, GI87082195, Length=215, Percent_Identity=35.3488372093023, Blast_Score=123, Evalue=1e-29, Organism=Escherichia coli, GI87081789, Length=170, Percent_Identity=26.4705882352941, Blast_Score=71, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6324100, Length=204, Percent_Identity=29.9019607843137, Blast_Score=94, Evalue=1e-20, Organism=Drosophila melanogaster, GI28571670, Length=172, Percent_Identity=30.2325581395349, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI85725204, Length=170, Percent_Identity=31.7647058823529, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI17737923, Length=170, Percent_Identity=31.7647058823529, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI45549270, Length=192, Percent_Identity=29.1666666666667, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI17864592, Length=184, Percent_Identity=29.8913043478261, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI17864598, Length=170, Percent_Identity=30, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI17864596, Length=173, Percent_Identity=28.9017341040462, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24646249, Length=165, Percent_Identity=30.3030303030303, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI17864594, Length=193, Percent_Identity=27.4611398963731, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI17933730, Length=204, Percent_Identity=25.9803921568627, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 27651; Mature: 27519
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQPDIHLYTASTMNGWKPLIFLEEAEVEYNLTPIDFSKKDQKSEWYMKLNPNGRIPTI CCCCCCEEEEEECCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCEEEEECCCCCCCEE VDLSNDNFVVFESGAILWYLAEKYGKFLPKEEKSRSQALQWLMFQMGGVGPMMGQAMYFQ EEECCCCEEEEECCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH RIAEPQGHHEEFSIKRYVQESRRLLEVLDKQLEGKTYLLGDEFSIADIATYPWARSYYWA HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHCCCCCCCCEEEE KVSVDGLENLQAWFECIDNRPRTQRALEIPKPFPAFFGKGDVATAESANADRFKTDVKS EEECCCHHHHHHHHHHHCCCCCCHHHEECCCCCHHHCCCCCCCCCCCCCCHHHHHCCCC >Mature Secondary Structure STQPDIHLYTASTMNGWKPLIFLEEAEVEYNLTPIDFSKKDQKSEWYMKLNPNGRIPTI CCCCCEEEEEECCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCEEEEECCCCCCCEE VDLSNDNFVVFESGAILWYLAEKYGKFLPKEEKSRSQALQWLMFQMGGVGPMMGQAMYFQ EEECCCCEEEEECCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH RIAEPQGHHEEFSIKRYVQESRRLLEVLDKQLEGKTYLLGDEFSIADIATYPWARSYYWA HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHCCCCCCCCEEEE KVSVDGLENLQAWFECIDNRPRTQRALEIPKPFPAFFGKGDVATAESANADRFKTDVKS EEECCCHHHHHHHHHHHCCCCCCHHHEECCCCCHHHCCCCCCCCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]