Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113476052
Identifier: 113476052
GI number: 113476052
Start: 3739793
End: 3740176
Strand: Reverse
Name: 113476052
Synonym: Tery_2423
Alternate gene names: NA
Gene position: 3740176-3739793 (Counterclockwise)
Preceding gene: 113476053
Following gene: 113476044
Centisome position: 48.26
GC content: 36.2
Gene sequence:
>384_bases ATGAGCAAAAAACTACCACTACCACCACCACCACCACCGCCTCCACTGAAACCTGAACTGGAAGAAAGCCCAGGCCCTAA ACCTGGCAGTAAGAAAAAATTTACACCAATAAGGAAACTTGAGTCTAGTAGTAGTAAATTCAAAATTCCAGAATGGCTTA AGGTAACTCACATACCAGAAGGTCTCGTTACTATTGGTTTAGTTACAATGCTAGGAACTTTGTGGTTTTACAAAACTACA ATTTGTGAGTATCAAAGTTCTTATCGTTTCTCAAGAAAATGTAATTACAATATCGGCTTAATTAGTCATAAAAATAATTT AATTACTGTCGGAGGTTTTCTGTTTTTAGGCGGTTGTGCCTTATTCAATAGTAGAAAAGATTAG
Upstream 100 bases:
>100_bases ATTTTTCAAGACATTGTGATGTCAATACTCTAATTATTTATAATGATAACTTAAATAAGTCACAGTCTGAAATGTCTGAG TTGTTAGAGGAATTTTAGGT
Downstream 100 bases:
>100_bases TTATTGGACAGTACAAAGTTCTAAGAGAAAAAAACATTAGAGTCAATCAGCTAAACAGTAACTAAAAGATTTTTCACGAC TGTAAAACTAGTTTTTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MSKKLPLPPPPPPPPLKPELEESPGPKPGSKKKFTPIRKLESSSSKFKIPEWLKVTHIPEGLVTIGLVTMLGTLWFYKTT ICEYQSSYRFSRKCNYNIGLISHKNNLITVGGFLFLGGCALFNSRKD
Sequences:
>Translated_127_residues MSKKLPLPPPPPPPPLKPELEESPGPKPGSKKKFTPIRKLESSSSKFKIPEWLKVTHIPEGLVTIGLVTMLGTLWFYKTT ICEYQSSYRFSRKCNYNIGLISHKNNLITVGGFLFLGGCALFNSRKD >Mature_126_residues SKKLPLPPPPPPPPLKPELEESPGPKPGSKKKFTPIRKLESSSSKFKIPEWLKVTHIPEGLVTIGLVTMLGTLWFYKTTI CEYQSSYRFSRKCNYNIGLISHKNNLITVGGFLFLGGCALFNSRKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14233; Mature: 14102
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKLPLPPPPPPPPLKPELEESPGPKPGSKKKFTPIRKLESSSSKFKIPEWLKVTHIPE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEECCCC GLVTIGLVTMLGTLWFYKTTICEYQSSYRFSRKCNYNIGLISHKNNLITVGGFLFLGGCA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEHHHHHHHHHH LFNSRKD HCCCCCC >Mature Secondary Structure SKKLPLPPPPPPPPLKPELEESPGPKPGSKKKFTPIRKLESSSSKFKIPEWLKVTHIPE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEECCCC GLVTIGLVTMLGTLWFYKTTICEYQSSYRFSRKCNYNIGLISHKNNLITVGGFLFLGGCA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEHHHHHHHHHH LFNSRKD HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA