Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475996

Identifier: 113475996

GI number: 113475996

Start: 3650672

End: 3650887

Strand: Reverse

Name: 113475996

Synonym: Tery_2364

Alternate gene names: NA

Gene position: 3650887-3650672 (Counterclockwise)

Preceding gene: 113475998

Following gene: 113475995

Centisome position: 47.11

GC content: 43.06

Gene sequence:

>216_bases
ATGAGATTACCTAAACAAGCAGCTCCGGTAAAAAGACCCGATATTATTTCTCCTCATCTAGCAGTAGATGTGGAGCACGG
CCGGGGTCAAGACCTAGTAGCAATTCGTATGGATTTGATGCACGGAGCTAACTATAACGATCCGGCACCCTATAATTATC
CCACATATAATCAGATCATGTCTTCTGGTTGGGGTGGTAACTATTTTTGTTTGTAG

Upstream 100 bases:

>100_bases
TGGCAAATAGGCAACCAATTAAGAATTGTCAAGTTTGTTCTATTATGATTAATAAGGTATAATAGACTGAATTAATTGAA
TATATAGTCTAGTCAAAAAT

Downstream 100 bases:

>100_bases
TGAGGCTTTAGCTTTGGCAATATAATTATCCCACATATAACTCAGATTATATCTTATGGTTAGGATGGCCAATTCAAAGG
AGTCTTATACTACCCTGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MRLPKQAAPVKRPDIISPHLAVDVEHGRGQDLVAIRMDLMHGANYNDPAPYNYPTYNQIMSSGWGGNYFCL

Sequences:

>Translated_71_residues
MRLPKQAAPVKRPDIISPHLAVDVEHGRGQDLVAIRMDLMHGANYNDPAPYNYPTYNQIMSSGWGGNYFCL
>Mature_71_residues
MRLPKQAAPVKRPDIISPHLAVDVEHGRGQDLVAIRMDLMHGANYNDPAPYNYPTYNQIMSSGWGGNYFCL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7973; Mature: 7973

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLPKQAAPVKRPDIISPHLAVDVEHGRGQDLVAIRMDLMHGANYNDPAPYNYPTYNQIM
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEHHCCCCCCCCCCCCCCCHHHHH
SSGWGGNYFCL
HCCCCCEEEEC
>Mature Secondary Structure
MRLPKQAAPVKRPDIISPHLAVDVEHGRGQDLVAIRMDLMHGANYNDPAPYNYPTYNQIM
CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEHHCCCCCCCCCCCCCCCHHHHH
SSGWGGNYFCL
HCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA