Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475989

Identifier: 113475989

GI number: 113475989

Start: 3643590

End: 3643964

Strand: Reverse

Name: 113475989

Synonym: Tery_2357

Alternate gene names: NA

Gene position: 3643964-3643590 (Counterclockwise)

Preceding gene: 113475995

Following gene: 113475988

Centisome position: 47.02

GC content: 41.33

Gene sequence:

>375_bases
ATGGAAATAACTCTCGACCCAGAACTAGAAAAATTTATTCGTAATCAAGTACAAAGTGGTCAATATTGTTCCCTCGATGA
AGCTATAAATGTAGCTTTGAGACTACTAGCAACTCAAACTCTTGCTTCCCAAGGAATTAACAAAACGCCCAATGTGTGTG
GTGGTGATGCTTGTGTTGGGAAAACTCGGATTCCAGTTTGGTCATTGGTGAGCGATCGCCGCTTAGGAATGAGCGACCCT
GAGATTTTGGCAGCATTTCCTACCCTCAGTGCTGTTGATCTAGTCAATGCTTGGGTTTATGCAGAAAGACATCTAGAAGA
GATTGAAAGTGCTATTCGAGAGAATGAAGTCATCATGGAAACAGAAGTAGAATAA

Upstream 100 bases:

>100_bases
GGTGGTAATATGGTAGGAGTGCCCAACTTGAAAGTTTCCAGGTTTTCTGGCCATTTATTTGATACCCCTGGGAATTTTCA
GTTTGAAATATAATAAGATT

Downstream 100 bases:

>100_bases
GATGGTACTACTTTATGCAGATGAAAACTTTCCATTGCCTGTCGTCAAAAATTTAACAAATATGGGTTATAATGTTTTAA
CTGCTCAAGCGGCAGGTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MEITLDPELEKFIRNQVQSGQYCSLDEAINVALRLLATQTLASQGINKTPNVCGGDACVGKTRIPVWSLVSDRRLGMSDP
EILAAFPTLSAVDLVNAWVYAERHLEEIESAIRENEVIMETEVE

Sequences:

>Translated_124_residues
MEITLDPELEKFIRNQVQSGQYCSLDEAINVALRLLATQTLASQGINKTPNVCGGDACVGKTRIPVWSLVSDRRLGMSDP
EILAAFPTLSAVDLVNAWVYAERHLEEIESAIRENEVIMETEVE
>Mature_124_residues
MEITLDPELEKFIRNQVQSGQYCSLDEAINVALRLLATQTLASQGINKTPNVCGGDACVGKTRIPVWSLVSDRRLGMSDP
EILAAFPTLSAVDLVNAWVYAERHLEEIESAIRENEVIMETEVE

Specific function: Unknown

COG id: COG2442

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13747; Mature: 13747

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEITLDPELEKFIRNQVQSGQYCSLDEAINVALRLLATQTLASQGINKTPNVCGGDACVG
CCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
KTRIPVWSLVSDRRLGMSDPEILAAFPTLSAVDLVNAWVYAERHLEEIESAIRENEVIME
CCCCCHHHHHCCCCCCCCCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
TEVE
ECCC
>Mature Secondary Structure
MEITLDPELEKFIRNQVQSGQYCSLDEAINVALRLLATQTLASQGINKTPNVCGGDACVG
CCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
KTRIPVWSLVSDRRLGMSDPEILAAFPTLSAVDLVNAWVYAERHLEEIESAIRENEVIME
CCCCCHHHHHCCCCCCCCCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
TEVE
ECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA