Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
---|---|
Accession | NC_008312 |
Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113475988
Identifier: 113475988
GI number: 113475988
Start: 3643250
End: 3643588
Strand: Reverse
Name: 113475988
Synonym: Tery_2356
Alternate gene names: NA
Gene position: 3643588-3643250 (Counterclockwise)
Preceding gene: 113475989
Following gene: 113475987
Centisome position: 47.01
GC content: 34.81
Gene sequence:
>339_bases ATGGTACTACTTTATGCAGATGAAAACTTTCCATTGCCTGTCGTCAAAAATTTAACAAATATGGGTTATAATGTTTTAAC TGCTCAAGCGGCAGGTAAAGCAAATTTACAAATCCCCGATGAAGAAGTATTAGCATTTGCTGTTAATAACGGACGAGCTG TTTTGACACGAAATCGTCGTGATTTCATTCAACTACATATTGCTAATTCCAACCATGAAGGAATAATTGTTTGTACAGAA GATTCTAACTTTGTTGGAGTTGCCAACCGAATTCATGGGACAATTTCAACTACTGAAAGCTTAAAAAATAAGTTAATTAG AATCAACCGTTCATCCTGA
Upstream 100 bases:
>100_bases GATCTAGTCAATGCTTGGGTTTATGCAGAAAGACATCTAGAAGAGATTGAAAGTGCTATTCGAGAGAATGAAGTCATCAT GGAAACAGAAGTAGAATAAG
Downstream 100 bases:
>100_bases CTATGAGATTATTATATTCAGGACTTGTAGCATTTCTCAAAAACTGTTCTCCATTTTTGCGGATTAGTTTTTGTATCAGG ACTTACCCACGAGCACGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MVLLYADENFPLPVVKNLTNMGYNVLTAQAAGKANLQIPDEEVLAFAVNNGRAVLTRNRRDFIQLHIANSNHEGIIVCTE DSNFVGVANRIHGTISTTESLKNKLIRINRSS
Sequences:
>Translated_112_residues MVLLYADENFPLPVVKNLTNMGYNVLTAQAAGKANLQIPDEEVLAFAVNNGRAVLTRNRRDFIQLHIANSNHEGIIVCTE DSNFVGVANRIHGTISTTESLKNKLIRINRSS >Mature_112_residues MVLLYADENFPLPVVKNLTNMGYNVLTAQAAGKANLQIPDEEVLAFAVNNGRAVLTRNRRDFIQLHIANSNHEGIIVCTE DSNFVGVANRIHGTISTTESLKNKLIRINRSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12362; Mature: 12362
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLLYADENFPLPVVKNLTNMGYNVLTAQAAGKANLQIPDEEVLAFAVNNGRAVLTRNRR CEEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCC DFIQLHIANSNHEGIIVCTEDSNFVGVANRIHGTISTTESLKNKLIRINRSS EEEEEEEECCCCCEEEEEECCCCEEEEECEEEEEEECHHHHCCEEEEEECCC >Mature Secondary Structure MVLLYADENFPLPVVKNLTNMGYNVLTAQAAGKANLQIPDEEVLAFAVNNGRAVLTRNRR CEEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCC DFIQLHIANSNHEGIIVCTEDSNFVGVANRIHGTISTTESLKNKLIRINRSS EEEEEEEECCCCCEEEEEECCCCEEEEECEEEEEEECHHHHCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA