Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475988

Identifier: 113475988

GI number: 113475988

Start: 3643250

End: 3643588

Strand: Reverse

Name: 113475988

Synonym: Tery_2356

Alternate gene names: NA

Gene position: 3643588-3643250 (Counterclockwise)

Preceding gene: 113475989

Following gene: 113475987

Centisome position: 47.01

GC content: 34.81

Gene sequence:

>339_bases
ATGGTACTACTTTATGCAGATGAAAACTTTCCATTGCCTGTCGTCAAAAATTTAACAAATATGGGTTATAATGTTTTAAC
TGCTCAAGCGGCAGGTAAAGCAAATTTACAAATCCCCGATGAAGAAGTATTAGCATTTGCTGTTAATAACGGACGAGCTG
TTTTGACACGAAATCGTCGTGATTTCATTCAACTACATATTGCTAATTCCAACCATGAAGGAATAATTGTTTGTACAGAA
GATTCTAACTTTGTTGGAGTTGCCAACCGAATTCATGGGACAATTTCAACTACTGAAAGCTTAAAAAATAAGTTAATTAG
AATCAACCGTTCATCCTGA

Upstream 100 bases:

>100_bases
GATCTAGTCAATGCTTGGGTTTATGCAGAAAGACATCTAGAAGAGATTGAAAGTGCTATTCGAGAGAATGAAGTCATCAT
GGAAACAGAAGTAGAATAAG

Downstream 100 bases:

>100_bases
CTATGAGATTATTATATTCAGGACTTGTAGCATTTCTCAAAAACTGTTCTCCATTTTTGCGGATTAGTTTTTGTATCAGG
ACTTACCCACGAGCACGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MVLLYADENFPLPVVKNLTNMGYNVLTAQAAGKANLQIPDEEVLAFAVNNGRAVLTRNRRDFIQLHIANSNHEGIIVCTE
DSNFVGVANRIHGTISTTESLKNKLIRINRSS

Sequences:

>Translated_112_residues
MVLLYADENFPLPVVKNLTNMGYNVLTAQAAGKANLQIPDEEVLAFAVNNGRAVLTRNRRDFIQLHIANSNHEGIIVCTE
DSNFVGVANRIHGTISTTESLKNKLIRINRSS
>Mature_112_residues
MVLLYADENFPLPVVKNLTNMGYNVLTAQAAGKANLQIPDEEVLAFAVNNGRAVLTRNRRDFIQLHIANSNHEGIIVCTE
DSNFVGVANRIHGTISTTESLKNKLIRINRSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12362; Mature: 12362

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLLYADENFPLPVVKNLTNMGYNVLTAQAAGKANLQIPDEEVLAFAVNNGRAVLTRNRR
CEEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCC
DFIQLHIANSNHEGIIVCTEDSNFVGVANRIHGTISTTESLKNKLIRINRSS
EEEEEEEECCCCCEEEEEECCCCEEEEECEEEEEEECHHHHCCEEEEEECCC
>Mature Secondary Structure
MVLLYADENFPLPVVKNLTNMGYNVLTAQAAGKANLQIPDEEVLAFAVNNGRAVLTRNRR
CEEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCC
DFIQLHIANSNHEGIIVCTEDSNFVGVANRIHGTISTTESLKNKLIRINRSS
EEEEEEEECCCCCEEEEEECCCCEEEEECEEEEEEECHHHHCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA