Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475975

Identifier: 113475975

GI number: 113475975

Start: 3618887

End: 3619681

Strand: Reverse

Name: 113475975

Synonym: Tery_2343

Alternate gene names: NA

Gene position: 3619681-3618887 (Counterclockwise)

Preceding gene: 113475976

Following gene: 113475974

Centisome position: 46.7

GC content: 34.59

Gene sequence:

>795_bases
ATGTCAGAAGATCAACCAAAGCAAATAAATTCAGAACAACCTCAAACAGAAGCAATTTCTCAGGAAACGACAGAAAATCC
TTCTATGATATCCGAAACCCAACCTCCAGAACAACCCATTTCTGATAATGAATCAGTTGTTGCCAAACCTCGACTTTGGC
AGCAAGTTTTGGGGTTAGTTCGTTCCTTATTACCACAGTCTCTAAATAAGAATCTTTCTGATAACTTTTTGAGTGTGGCT
GTCACAGGTATTTTTGCCCTTATTCTGGTAGTTATTTTTGTATCAATTTCACCTAGTCAAGATATTCCCGTCGTTGCAGA
GTATGAATTAAATGAAGAAACTCCCGCCCCAGAATCTCTAAGTTCTACAATAGATTCAAAAAATCCACAACTTTCGGAAA
CAGCATTACAAGAAGCTCTTGAATCTACAGAGCCCATTATCACCCCACCTCCAGAGTTGACTCCAGAGCAAACTTTTCTA
GTGTCAATTCAAAATCAGATTGATGATTTAGCTAATCAATATGCTGGTGGAATTATTAAGTCTTTAAAATTTTATCTTTC
CACTAATTTATTAATGGCTGAACTGAGCAATGATTGGTATAACATGACTCAAGAAGAACAAAATAAATTAGTCAATCAAA
TGTTTGAAGAAGTGCAAGATTTAGACTTTAAGAAATTGATACTAATCAACTCTCAAGGTAGAACTATAGCTCGTACTTCA
GTTATTAATTCTTATATGATAATTTTAGAGCGATCGCTTTTAAAATTACCAGAGTCTTTTGATAGTAAAGAATAG

Upstream 100 bases:

>100_bases
GTCGCAACAATAGGATAATTGACCAATAAGTTTGAAAGCTGTTAAAACTCTCTCCAACTCATTATTCGTTGATTTACTTA
GTCCAAAAGGTATAGAAAAA

Downstream 100 bases:

>100_bases
TTAATTCTCAGCATTCATTGTTCAGCTTTTCCTGGATAATCGAATCCCAATCAACTTTTGAACAGAATAAACTAATAAGG
TTATCTGATGACCTTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MSEDQPKQINSEQPQTEAISQETTENPSMISETQPPEQPISDNESVVAKPRLWQQVLGLVRSLLPQSLNKNLSDNFLSVA
VTGIFALILVVIFVSISPSQDIPVVAEYELNEETPAPESLSSTIDSKNPQLSETALQEALESTEPIITPPPELTPEQTFL
VSIQNQIDDLANQYAGGIIKSLKFYLSTNLLMAELSNDWYNMTQEEQNKLVNQMFEEVQDLDFKKLILINSQGRTIARTS
VINSYMIILERSLLKLPESFDSKE

Sequences:

>Translated_264_residues
MSEDQPKQINSEQPQTEAISQETTENPSMISETQPPEQPISDNESVVAKPRLWQQVLGLVRSLLPQSLNKNLSDNFLSVA
VTGIFALILVVIFVSISPSQDIPVVAEYELNEETPAPESLSSTIDSKNPQLSETALQEALESTEPIITPPPELTPEQTFL
VSIQNQIDDLANQYAGGIIKSLKFYLSTNLLMAELSNDWYNMTQEEQNKLVNQMFEEVQDLDFKKLILINSQGRTIARTS
VINSYMIILERSLLKLPESFDSKE
>Mature_263_residues
SEDQPKQINSEQPQTEAISQETTENPSMISETQPPEQPISDNESVVAKPRLWQQVLGLVRSLLPQSLNKNLSDNFLSVAV
TGIFALILVVIFVSISPSQDIPVVAEYELNEETPAPESLSSTIDSKNPQLSETALQEALESTEPIITPPPELTPEQTFLV
SIQNQIDDLANQYAGGIIKSLKFYLSTNLLMAELSNDWYNMTQEEQNKLVNQMFEEVQDLDFKKLILINSQGRTIARTSV
INSYMIILERSLLKLPESFDSKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29571; Mature: 29439

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEDQPKQINSEQPQTEAISQETTENPSMISETQPPEQPISDNESVVAKPRLWQQVLGLV
CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHH
RSLLPQSLNKNLSDNFLSVAVTGIFALILVVIFVSISPSQDIPVVAEYELNEETPAPESL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHH
SSTIDSKNPQLSETALQEALESTEPIITPPPELTPEQTFLVSIQNQIDDLANQYAGGIIK
HHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SLKFYLSTNLLMAELSNDWYNMTQEEQNKLVNQMFEEVQDLDFKKLILINSQGRTIARTS
HHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH
VINSYMIILERSLLKLPESFDSKE
HHHHHHHHHHHHHHHCCHHCCCCC
>Mature Secondary Structure 
SEDQPKQINSEQPQTEAISQETTENPSMISETQPPEQPISDNESVVAKPRLWQQVLGLV
CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHH
RSLLPQSLNKNLSDNFLSVAVTGIFALILVVIFVSISPSQDIPVVAEYELNEETPAPESL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHH
SSTIDSKNPQLSETALQEALESTEPIITPPPELTPEQTFLVSIQNQIDDLANQYAGGIIK
HHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SLKFYLSTNLLMAELSNDWYNMTQEEQNKLVNQMFEEVQDLDFKKLILINSQGRTIARTS
HHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH
VINSYMIILERSLLKLPESFDSKE
HHHHHHHHHHHHHHHCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA