Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475939

Identifier: 113475939

GI number: 113475939

Start: 3569986

End: 3570354

Strand: Reverse

Name: 113475939

Synonym: Tery_2303

Alternate gene names: NA

Gene position: 3570354-3569986 (Counterclockwise)

Preceding gene: 113475941

Following gene: 113475938

Centisome position: 46.07

GC content: 38.21

Gene sequence:

>369_bases
ATGGTTACTTGGCGTTGTATAAAAAGTTGTGGTGCTTGTTGTTACTTAGATCCGACGGAGCGCCCAGATCTAGAAGAATA
CTTATCTGCAGAGGAGGTTGAGTATTATATGAGTTTAATAGGGGCAGATGGATGGTGTATTAATTATGACTCTTTAAGTC
GAGAATGTCGTATTTACCCTGATAGACCAAAGTTTTGTCGAGTCCAGGCAGATATTTTTAAGGATATGTACGATGTTGAA
CCAGAGGAACTAGATGAATTTGCTATTGACTGTTGTCAGCAACATATTGGAGATATGTATGGTGAGTATAGTCTAGAAAT
GCTTCGGTTTAATAATGCAGTTGGTGTTAGATCGGGTTTTGAGAGATAA

Upstream 100 bases:

>100_bases
CAAAACTCAATATTTCGTTTTGCTAGAGTCAAGGGGATGTTAGTTCCAGTCCTCTAAAATTTTTTGGGGAATTTTAAATG
AAAATTTCAAGTTAAAAAAA

Downstream 100 bases:

>100_bases
TTTAGGGTAAACAGATATAATTTGCTGATTTTTAGTATATGTTTTTTTGAAATTTAGGTAAACAATATATGGGGAAATTC
TATTTTCAAGAGGCATAATA

Product: hypothetical protein

Products: NA

Alternate protein names: Fe-S-Cluster Oxidoreductase; Fe-S-Cluster Oxidoreductase-Like

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MVTWRCIKSCGACCYLDPTERPDLEEYLSAEEVEYYMSLIGADGWCINYDSLSRECRIYPDRPKFCRVQADIFKDMYDVE
PEELDEFAIDCCQQHIGDMYGEYSLEMLRFNNAVGVRSGFER

Sequences:

>Translated_122_residues
MVTWRCIKSCGACCYLDPTERPDLEEYLSAEEVEYYMSLIGADGWCINYDSLSRECRIYPDRPKFCRVQADIFKDMYDVE
PEELDEFAIDCCQQHIGDMYGEYSLEMLRFNNAVGVRSGFER
>Mature_122_residues
MVTWRCIKSCGACCYLDPTERPDLEEYLSAEEVEYYMSLIGADGWCINYDSLSRECRIYPDRPKFCRVQADIFKDMYDVE
PEELDEFAIDCCQQHIGDMYGEYSLEMLRFNNAVGVRSGFER

Specific function: Unknown

COG id: COG0727

COG function: function code R; Predicted Fe-S-cluster oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14322; Mature: 14322

Theoretical pI: Translated: 4.07; Mature: 4.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
11.5 %Cys+Met (Translated Protein)
7.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
11.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTWRCIKSCGACCYLDPTERPDLEEYLSAEEVEYYMSLIGADGWCINYDSLSRECRIYP
CCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECHHCCCCCEEECC
DRPKFCRVQADIFKDMYDVEPEELDEFAIDCCQQHIGDMYGEYSLEMLRFNNAVGVRSGF
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
ER
CC
>Mature Secondary Structure
MVTWRCIKSCGACCYLDPTERPDLEEYLSAEEVEYYMSLIGADGWCINYDSLSRECRIYP
CCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECHHCCCCCEEECC
DRPKFCRVQADIFKDMYDVEPEELDEFAIDCCQQHIGDMYGEYSLEMLRFNNAVGVRSGF
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
ER
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA