Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113475939
Identifier: 113475939
GI number: 113475939
Start: 3569986
End: 3570354
Strand: Reverse
Name: 113475939
Synonym: Tery_2303
Alternate gene names: NA
Gene position: 3570354-3569986 (Counterclockwise)
Preceding gene: 113475941
Following gene: 113475938
Centisome position: 46.07
GC content: 38.21
Gene sequence:
>369_bases ATGGTTACTTGGCGTTGTATAAAAAGTTGTGGTGCTTGTTGTTACTTAGATCCGACGGAGCGCCCAGATCTAGAAGAATA CTTATCTGCAGAGGAGGTTGAGTATTATATGAGTTTAATAGGGGCAGATGGATGGTGTATTAATTATGACTCTTTAAGTC GAGAATGTCGTATTTACCCTGATAGACCAAAGTTTTGTCGAGTCCAGGCAGATATTTTTAAGGATATGTACGATGTTGAA CCAGAGGAACTAGATGAATTTGCTATTGACTGTTGTCAGCAACATATTGGAGATATGTATGGTGAGTATAGTCTAGAAAT GCTTCGGTTTAATAATGCAGTTGGTGTTAGATCGGGTTTTGAGAGATAA
Upstream 100 bases:
>100_bases CAAAACTCAATATTTCGTTTTGCTAGAGTCAAGGGGATGTTAGTTCCAGTCCTCTAAAATTTTTTGGGGAATTTTAAATG AAAATTTCAAGTTAAAAAAA
Downstream 100 bases:
>100_bases TTTAGGGTAAACAGATATAATTTGCTGATTTTTAGTATATGTTTTTTTGAAATTTAGGTAAACAATATATGGGGAAATTC TATTTTCAAGAGGCATAATA
Product: hypothetical protein
Products: NA
Alternate protein names: Fe-S-Cluster Oxidoreductase; Fe-S-Cluster Oxidoreductase-Like
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MVTWRCIKSCGACCYLDPTERPDLEEYLSAEEVEYYMSLIGADGWCINYDSLSRECRIYPDRPKFCRVQADIFKDMYDVE PEELDEFAIDCCQQHIGDMYGEYSLEMLRFNNAVGVRSGFER
Sequences:
>Translated_122_residues MVTWRCIKSCGACCYLDPTERPDLEEYLSAEEVEYYMSLIGADGWCINYDSLSRECRIYPDRPKFCRVQADIFKDMYDVE PEELDEFAIDCCQQHIGDMYGEYSLEMLRFNNAVGVRSGFER >Mature_122_residues MVTWRCIKSCGACCYLDPTERPDLEEYLSAEEVEYYMSLIGADGWCINYDSLSRECRIYPDRPKFCRVQADIFKDMYDVE PEELDEFAIDCCQQHIGDMYGEYSLEMLRFNNAVGVRSGFER
Specific function: Unknown
COG id: COG0727
COG function: function code R; Predicted Fe-S-cluster oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14322; Mature: 14322
Theoretical pI: Translated: 4.07; Mature: 4.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 11.5 %Cys+Met (Translated Protein) 7.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 11.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTWRCIKSCGACCYLDPTERPDLEEYLSAEEVEYYMSLIGADGWCINYDSLSRECRIYP CCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECHHCCCCCEEECC DRPKFCRVQADIFKDMYDVEPEELDEFAIDCCQQHIGDMYGEYSLEMLRFNNAVGVRSGF CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC ER CC >Mature Secondary Structure MVTWRCIKSCGACCYLDPTERPDLEEYLSAEEVEYYMSLIGADGWCINYDSLSRECRIYP CCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECHHCCCCCEEECC DRPKFCRVQADIFKDMYDVEPEELDEFAIDCCQQHIGDMYGEYSLEMLRFNNAVGVRSGF CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC ER CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA