Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475938

Identifier: 113475938

GI number: 113475938

Start: 3569291

End: 3569746

Strand: Reverse

Name: 113475938

Synonym: Tery_2302

Alternate gene names: NA

Gene position: 3569746-3569291 (Counterclockwise)

Preceding gene: 113475939

Following gene: 113475937

Centisome position: 46.06

GC content: 34.65

Gene sequence:

>456_bases
GTGAAATTTTTCCAGATTAGCGAAAATACTGATAAAAACCAAGTAGATTTAGAAGAAAAAAAGGTTTCTCAGAGGTTACC
TTTGGAAGTTAGTTCAGAAAAGGGAGAAGTTTTAATTCCTACTAATTCTCAATCAGAAGAAGAAGAAAGAAAGGTACAAA
AAGCAGGGGCATGGGCAGTATTTGCTTCAACGTTTGTGACAATATTCTTAGCAGAAATTGGTGATAAAACTCAACTTACT
ACTTTGCTAATGACTGCTGAGTCTCAAGCTCCTTGGATAGTATTTGCAGGTGCAGGTAGTGCCTTAGTAATTACAAGTTT
ATTGGGGGTTTTGTTAGGTCAATGGTTAGCTAGTCACCTTTCTCCAAAAACTATAGAAAGGTCGGCAGGAGCTATTTTAT
TGCTAATATCTTTGACTTTGATATTTGAAGTTTTTTATGAAAATTTTCATGGTTAA

Upstream 100 bases:

>100_bases
TAGTTAAGTAGTTGAGATAGAGGATAATTATTTGAAACAATAAATAAGATTGAAAAAATTTAGATACATTTAGTAATTTA
GTAATTTATTATAGTTGCCA

Downstream 100 bases:

>100_bases
TAAATTATGTATTATTTCAGTTATCAGGATTAAGAATATGGAATTTCTGATAAGTATTTACAGAAAATTATTGGTCGCAT
TAATGTTGAGAAAAGAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MKFFQISENTDKNQVDLEEKKVSQRLPLEVSSEKGEVLIPTNSQSEEEERKVQKAGAWAVFASTFVTIFLAEIGDKTQLT
TLLMTAESQAPWIVFAGAGSALVITSLLGVLLGQWLASHLSPKTIERSAGAILLLISLTLIFEVFYENFHG

Sequences:

>Translated_151_residues
MKFFQISENTDKNQVDLEEKKVSQRLPLEVSSEKGEVLIPTNSQSEEEERKVQKAGAWAVFASTFVTIFLAEIGDKTQLT
TLLMTAESQAPWIVFAGAGSALVITSLLGVLLGQWLASHLSPKTIERSAGAILLLISLTLIFEVFYENFHG
>Mature_151_residues
MKFFQISENTDKNQVDLEEKKVSQRLPLEVSSEKGEVLIPTNSQSEEEERKVQKAGAWAVFASTFVTIFLAEIGDKTQLT
TLLMTAESQAPWIVFAGAGSALVITSLLGVLLGQWLASHLSPKTIERSAGAILLLISLTLIFEVFYENFHG

Specific function: Unknown

COG id: COG2119

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16629; Mature: 16629

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFFQISENTDKNQVDLEEKKVSQRLPLEVSSEKGEVLIPTNSQSEEEERKVQKAGAWAV
CCEEECCCCCCCCCCCHHHHHHHHHCCCEECCCCCCEEEECCCCCHHHHHHHHHHCCHHH
FASTFVTIFLAEIGDKTQLTTLLMTAESQAPWIVFAGAGSALVITSLLGVLLGQWLASHL
HHHHHHHHHHHHCCCCHHHHHHEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHC
SPKTIERSAGAILLLISLTLIFEVFYENFHG
CHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKFFQISENTDKNQVDLEEKKVSQRLPLEVSSEKGEVLIPTNSQSEEEERKVQKAGAWAV
CCEEECCCCCCCCCCCHHHHHHHHHCCCEECCCCCCEEEECCCCCHHHHHHHHHHCCHHH
FASTFVTIFLAEIGDKTQLTTLLMTAESQAPWIVFAGAGSALVITSLLGVLLGQWLASHL
HHHHHHHHHHHHCCCCHHHHHHEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHC
SPKTIERSAGAILLLISLTLIFEVFYENFHG
CHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA