| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is hslO
Identifier: 113475920
GI number: 113475920
Start: 3553177
End: 3554112
Strand: Reverse
Name: hslO
Synonym: Tery_2283
Alternate gene names: 113475920
Gene position: 3554112-3553177 (Counterclockwise)
Preceding gene: 113475922
Following gene: 113475919
Centisome position: 45.86
GC content: 39.42
Gene sequence:
>936_bases ATGGCAGATCAACTAATTAGAGCTATGGCAGCAGAAGGCGGCATTCGTGCTGTTGGTGTAATTACCACTCGCTTAACCGA AGAAGCAAGACAACGACATAAGCTTTCTTGGGTAGCCTCTGTAGTTCTTGGCCGAACAATGGCAGCCGGACTATTATTAG CCTCTAGTATGAAAACTCCAGAATCAAGAGTTAACATTAGGGTCCAGGGCAATGGTCCATTAGGAGAGGTACTAGTTGAT GCTGGCCTAGATGGAACTGTACGAGGTTATGTTAATAATCCTACCATTGAGCTATTACCAAATAAAATTGGCAAACATGA TATAGGAAAAGCAGTAGGCAATCAAGGCTACTTATATATAGTAAGAGATATCGGCTATGGTTATCCATACTCCGGTACGG TAGAATTAGTATCTGGAGAAATTGGAGATGACATTACCCATTATTTAGCAAAATCAGAACAAACGCCATCAGCTTTAGTG CTAGGAGTATTCGTCGATAAAGAAGGAGTACAGACGGCAGGAGGAATTTTGTTGCAGGTTATGCCCAAAGTAGCTATAGA TGAAGAATTAGTTCAAGTCTTAGAATCTCGTATAGCTTCTCTATCAGGATTTACTTCTTTACTGCACTCAGGCAAGACAT TACCAGAAATTTTCCAAGAACTTTTGGGAGATATGGGCTTAAATATATTACCCGAAGCTCAAATAGTTCGTTTTAAATGT GACTGTTCTATGGAAAAAGTATTGCGGGCTTTAAGAATGTTTGGTGTAGACGAACTACAAAATATGATTGAAGAAGATAA GGGTGCCGAGGTAACCTGTGAATTTTGTTCACAATTGTATCAAGCAAGTCCAAAAGAGCTCACACAAATTATTCAAGACT TACAACAACCTTCTACAGAAGTTCCTCTTGGACAATTACGTAGGTCATCTCATTAA
Upstream 100 bases:
>100_bases ACTTAAAATCTGCTGTATCCCAGACAAATTTTACCTGTAGTATTCCAACAGGGTTATGATAAAGAAGTCATAATTATTAG GCAATGTAAGGATTTCTCCA
Downstream 100 bases:
>100_bases TACCTTCTAAATATCTAGACATCTCTAAATATGCCTCCCATCAGCGAGGTGAAAGTGATTTTTGAATTATATTTCCACCG CCCTACTGGAAAAGTTGGTT
Product: Hsp33-like chaperonin
Products: NA
Alternate protein names: Heat shock protein 33 homolog; HSP33
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MADQLIRAMAAEGGIRAVGVITTRLTEEARQRHKLSWVASVVLGRTMAAGLLLASSMKTPESRVNIRVQGNGPLGEVLVD AGLDGTVRGYVNNPTIELLPNKIGKHDIGKAVGNQGYLYIVRDIGYGYPYSGTVELVSGEIGDDITHYLAKSEQTPSALV LGVFVDKEGVQTAGGILLQVMPKVAIDEELVQVLESRIASLSGFTSLLHSGKTLPEIFQELLGDMGLNILPEAQIVRFKC DCSMEKVLRALRMFGVDELQNMIEEDKGAEVTCEFCSQLYQASPKELTQIIQDLQQPSTEVPLGQLRRSSH
Sequences:
>Translated_311_residues MADQLIRAMAAEGGIRAVGVITTRLTEEARQRHKLSWVASVVLGRTMAAGLLLASSMKTPESRVNIRVQGNGPLGEVLVD AGLDGTVRGYVNNPTIELLPNKIGKHDIGKAVGNQGYLYIVRDIGYGYPYSGTVELVSGEIGDDITHYLAKSEQTPSALV LGVFVDKEGVQTAGGILLQVMPKVAIDEELVQVLESRIASLSGFTSLLHSGKTLPEIFQELLGDMGLNILPEAQIVRFKC DCSMEKVLRALRMFGVDELQNMIEEDKGAEVTCEFCSQLYQASPKELTQIIQDLQQPSTEVPLGQLRRSSH >Mature_310_residues ADQLIRAMAAEGGIRAVGVITTRLTEEARQRHKLSWVASVVLGRTMAAGLLLASSMKTPESRVNIRVQGNGPLGEVLVDA GLDGTVRGYVNNPTIELLPNKIGKHDIGKAVGNQGYLYIVRDIGYGYPYSGTVELVSGEIGDDITHYLAKSEQTPSALVL GVFVDKEGVQTAGGILLQVMPKVAIDEELVQVLESRIASLSGFTSLLHSGKTLPEIFQELLGDMGLNILPEAQIVRFKCD CSMEKVLRALRMFGVDELQNMIEEDKGAEVTCEFCSQLYQASPKELTQIIQDLQQPSTEVPLGQLRRSSH
Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
COG id: COG1281
COG function: function code O; Disulfide bond chaperones of the HSP33 family
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HSP33 family
Homologues:
Organism=Escherichia coli, GI87082260, Length=291, Percent_Identity=25.085910652921, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HSLO_TRIEI (Q112R6)
Other databases:
- EMBL: CP000393 - RefSeq: YP_721981.1 - ProteinModelPortal: Q112R6 - SMR: Q112R6 - STRING: Q112R6 - GeneID: 4243278 - GenomeReviews: CP000393_GR - KEGG: ter:Tery_2283 - NMPDR: fig|203124.1.peg.1498 - eggNOG: COG1281 - HOGENOM: HBG286231 - OMA: QRHKLSY - PhylomeDB: Q112R6 - ProtClustDB: PRK00114 - BioCyc: TERY203124:TERY_2283-MONOMER - GO: GO:0005737 - HAMAP: MF_00117 - InterPro: IPR000397 - InterPro: IPR016154 - InterPro: IPR016153 - Gene3D: G3DSA:3.90.1280.10 - Gene3D: G3DSA:3.55.30.10 - PIRSF: PIRSF005261
Pfam domain/function: PF01430 HSP33; SSF64397 Heat_shock_Hsp33_N
EC number: NA
Molecular weight: Translated: 33778; Mature: 33647
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADQLIRAMAAEGGIRAVGVITTRLTEEARQRHKLSWVASVVLGRTMAAGLLLASSMKTP CHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ESRVNIRVQGNGPLGEVLVDAGLDGTVRGYVNNPTIELLPNKIGKHDIGKAVGNQGYLYI CHHEEEEEECCCCHHHHHHHCCCCCEEEEEECCCEEEECCCCCCHHHHHHHHCCCCEEEE VRDIGYGYPYSGTVELVSGEIGDDITHYLAKSEQTPSALVLGVFVDKEGVQTAGGILLQV EEECCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHH MPKVAIDEELVQVLESRIASLSGFTSLLHSGKTLPEIFQELLGDMGLNILPEAQIVRFKC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEC DCSMEKVLRALRMFGVDELQNMIEEDKGAEVTCEFCSQLYQASPKELTQIIQDLQQPSTE CCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHCCCCC VPLGQLRRSSH CCHHHHHCCCC >Mature Secondary Structure ADQLIRAMAAEGGIRAVGVITTRLTEEARQRHKLSWVASVVLGRTMAAGLLLASSMKTP HHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ESRVNIRVQGNGPLGEVLVDAGLDGTVRGYVNNPTIELLPNKIGKHDIGKAVGNQGYLYI CHHEEEEEECCCCHHHHHHHCCCCCEEEEEECCCEEEECCCCCCHHHHHHHHCCCCEEEE VRDIGYGYPYSGTVELVSGEIGDDITHYLAKSEQTPSALVLGVFVDKEGVQTAGGILLQV EEECCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHH MPKVAIDEELVQVLESRIASLSGFTSLLHSGKTLPEIFQELLGDMGLNILPEAQIVRFKC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEC DCSMEKVLRALRMFGVDELQNMIEEDKGAEVTCEFCSQLYQASPKELTQIIQDLQQPSTE CCCHHHHHHHHHHCCHHHHHHHHHHCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHCCCCC VPLGQLRRSSH CCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA