Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475878

Identifier: 113475878

GI number: 113475878

Start: 3483225

End: 3484160

Strand: Reverse

Name: 113475878

Synonym: Tery_2237

Alternate gene names: NA

Gene position: 3484160-3483225 (Counterclockwise)

Preceding gene: 113475879

Following gene: 113475877

Centisome position: 44.96

GC content: 32.91

Gene sequence:

>936_bases
ATGACAAATCAGAAATTGAATCTACCTAATTTTGAGAAGGCAGAAGATTTACTTAATGATTTATTTGAAAAAGTAAAAAG
CCAGGAAAATGAGTTAGGGGGAGGGGAAGCTCAAGAGTTAAAAAGAGGAGCAACTGCGGTTAAAAGATTGAAGGAAACTA
CTGTTACTTTTGGTAATCCTGATAGTAGATTAATTCCTCTTACTGCAAAAGGTTTTGAAGCAGAAGGAATAGAGTTAAAT
TACGAAGTTAAACAGTTAATGAAGCGGTTTGATTTCTATTCTATGGTTGTGAGTATTGATCTAAGACCTCAACCAAGTGT
TTTAATTTCAAAGTTAGAATGTCGGCTTGATTTTGGTGCTCAAGGAAAAGAGGAGCCAATAGTTCATCGTATTATTCCAG
ATAGTAAATGGCAAACAATATTAAGTGCAGGAGTTAACTTTAATTTAGGATTAGATGCTAACTTGGATGTGGGAGTTGGA
GGTGATAGTTCTGAGTTAATGAAAATAGCTAATCTTCCTAATTATGATCAATTAAAAGTTGATTTAAGAGCTAAAAATAA
ATTTAAAACTTTTATTGTTTTTGATAGTTTAAATTATCGATTTGGTAAGTTTAATATCTCTGCTCATGGGGAAAATAATT
CTTGGTGTGAATGGCGGCTTGAAAAACCAGAAATTCAGGATAAGTCTACTGTAGAATTTAGCGTTATTTTTAAGGTTCCT
AAGGGATGGGAGTTTATTGATTTAATTGGTCATGCTTGGATTGAACCTAACATTGATTGGTTGAATGGTGAATTAACTCA
TGTAATATCAAGTTTACCAGGTCATTTAAAAAATTTGTTTGGGAGTAAAGATAAAGCAGCTAAGAGTTTTGCGGTTGGGA
TAAAGGAAGAATGGACTAGTCAGTGGGAAAAACAAATTAGCTTACCAAAACTGTAG

Upstream 100 bases:

>100_bases
ATAATTAATGAGAAAGTCTTTTAAACATATTGTTAAATCTTAGTTTTTGGAGACGTCTAAGTCAAACCTTATTTCCTAAA
AAGTATTTCCCAAAAAATTA

Downstream 100 bases:

>100_bases
ATTATTTACTTTTTGATTGTTCTTAATTTTTATGACGATGAATCAATGTTTTTGTAATGTTATTGTTTCTAATGAAAATA
CGGTTAAACTCATAAAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MTNQKLNLPNFEKAEDLLNDLFEKVKSQENELGGGEAQELKRGATAVKRLKETTVTFGNPDSRLIPLTAKGFEAEGIELN
YEVKQLMKRFDFYSMVVSIDLRPQPSVLISKLECRLDFGAQGKEEPIVHRIIPDSKWQTILSAGVNFNLGLDANLDVGVG
GDSSELMKIANLPNYDQLKVDLRAKNKFKTFIVFDSLNYRFGKFNISAHGENNSWCEWRLEKPEIQDKSTVEFSVIFKVP
KGWEFIDLIGHAWIEPNIDWLNGELTHVISSLPGHLKNLFGSKDKAAKSFAVGIKEEWTSQWEKQISLPKL

Sequences:

>Translated_311_residues
MTNQKLNLPNFEKAEDLLNDLFEKVKSQENELGGGEAQELKRGATAVKRLKETTVTFGNPDSRLIPLTAKGFEAEGIELN
YEVKQLMKRFDFYSMVVSIDLRPQPSVLISKLECRLDFGAQGKEEPIVHRIIPDSKWQTILSAGVNFNLGLDANLDVGVG
GDSSELMKIANLPNYDQLKVDLRAKNKFKTFIVFDSLNYRFGKFNISAHGENNSWCEWRLEKPEIQDKSTVEFSVIFKVP
KGWEFIDLIGHAWIEPNIDWLNGELTHVISSLPGHLKNLFGSKDKAAKSFAVGIKEEWTSQWEKQISLPKL
>Mature_310_residues
TNQKLNLPNFEKAEDLLNDLFEKVKSQENELGGGEAQELKRGATAVKRLKETTVTFGNPDSRLIPLTAKGFEAEGIELNY
EVKQLMKRFDFYSMVVSIDLRPQPSVLISKLECRLDFGAQGKEEPIVHRIIPDSKWQTILSAGVNFNLGLDANLDVGVGG
DSSELMKIANLPNYDQLKVDLRAKNKFKTFIVFDSLNYRFGKFNISAHGENNSWCEWRLEKPEIQDKSTVEFSVIFKVPK
GWEFIDLIGHAWIEPNIDWLNGELTHVISSLPGHLKNLFGSKDKAAKSFAVGIKEEWTSQWEKQISLPKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35259; Mature: 35127

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNQKLNLPNFEKAEDLLNDLFEKVKSQENELGGGEAQELKRGATAVKRLKETTVTFGNP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEECCC
DSRLIPLTAKGFEAEGIELNYEVKQLMKRFDFYSMVVSIDLRPQPSVLISKLECRLDFGA
CCEEEEEEECCCCCCCEEECHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHEEECCCC
QGKEEPIVHRIIPDSKWQTILSAGVNFNLGLDANLDVGVGGDSSELMKIANLPNYDQLKV
CCCCCCEEEECCCCHHHHHHHHCCCCEEECCCCCCEEECCCCHHHHHHHHCCCCCCCEEE
DLRAKNKFKTFIVFDSLNYRFGKFNISAHGENNSWCEWRLEKPEIQDKSTVEFSVIFKVP
EEEECCCEEEEEEEECCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEEECC
KGWEFIDLIGHAWIEPNIDWLNGELTHVISSLPGHLKNLFGSKDKAAKSFAVGIKEEWTS
CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCHHHHHHHCCHHHHHHH
QWEKQISLPKL
HHHHHCCCCCC
>Mature Secondary Structure 
TNQKLNLPNFEKAEDLLNDLFEKVKSQENELGGGEAQELKRGATAVKRLKETTVTFGNP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEEEECCC
DSRLIPLTAKGFEAEGIELNYEVKQLMKRFDFYSMVVSIDLRPQPSVLISKLECRLDFGA
CCEEEEEEECCCCCCCEEECHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHEEECCCC
QGKEEPIVHRIIPDSKWQTILSAGVNFNLGLDANLDVGVGGDSSELMKIANLPNYDQLKV
CCCCCCEEEECCCCHHHHHHHHCCCCEEECCCCCCEEECCCCHHHHHHHHCCCCCCCEEE
DLRAKNKFKTFIVFDSLNYRFGKFNISAHGENNSWCEWRLEKPEIQDKSTVEFSVIFKVP
EEEECCCEEEEEEEECCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEEECC
KGWEFIDLIGHAWIEPNIDWLNGELTHVISSLPGHLKNLFGSKDKAAKSFAVGIKEEWTS
CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCHHHHHHHCCHHHHHHH
QWEKQISLPKL
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA