Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475828

Identifier: 113475828

GI number: 113475828

Start: 3411560

End: 3411961

Strand: Reverse

Name: 113475828

Synonym: Tery_2185

Alternate gene names: NA

Gene position: 3411961-3411560 (Counterclockwise)

Preceding gene: 113475831

Following gene: 113475827

Centisome position: 44.02

GC content: 35.07

Gene sequence:

>402_bases
ATGGAAAGAGGTTTATTATGGTTGCCCTTATTGGGTGTGTTTATTTGGCTCAGTTGGGCAGGTTGGAATGAGTATCAAAA
GTTGGAAGCTTACCGTGTTTGGGCAAAACCTTTTGAGAAAGCTAAATATGATATTTATGCGGTATTGGGTCAGAATGGTG
AAAGTATAACTTGGGGAAAACCTAAACGCAAGGAACCTGTAAATTTGGAGACATTTTCTTTGTCAGATGTGCGATCGCTA
CAATTATTAGTTAATAATAAGCTAGTAGATCTAGAAAATCTTCCTACTCGGGGTAAGGTAGTTTTGGAGTTTATTTTTTC
TGATTCTAAAAATATCCAAGTTCCCTTTACAGATATTGATTTAGCTGTTAATTGGTACAAATATTTACAGCAAAAATTGT
AG

Upstream 100 bases:

>100_bases
TGTAAAAATAAGACTGGAAACAGAATTTTTCGTTTTACTTTAAGTTATTGCTTACTCAAATATTCAGTTATTATTATAAG
TAGAAAATCTGAGAACTAAA

Downstream 100 bases:

>100_bases
TAGTAGCATAACAGACCTAAAAATGTCTGCTTTTGTAGAACGAAGTGAAATCTAATCCTCAATTTGAAGATACTGAGCAT
TAAATTCCCTCCCCCACCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MERGLLWLPLLGVFIWLSWAGWNEYQKLEAYRVWAKPFEKAKYDIYAVLGQNGESITWGKPKRKEPVNLETFSLSDVRSL
QLLVNNKLVDLENLPTRGKVVLEFIFSDSKNIQVPFTDIDLAVNWYKYLQQKL

Sequences:

>Translated_133_residues
MERGLLWLPLLGVFIWLSWAGWNEYQKLEAYRVWAKPFEKAKYDIYAVLGQNGESITWGKPKRKEPVNLETFSLSDVRSL
QLLVNNKLVDLENLPTRGKVVLEFIFSDSKNIQVPFTDIDLAVNWYKYLQQKL
>Mature_133_residues
MERGLLWLPLLGVFIWLSWAGWNEYQKLEAYRVWAKPFEKAKYDIYAVLGQNGESITWGKPKRKEPVNLETFSLSDVRSL
QLLVNNKLVDLENLPTRGKVVLEFIFSDSKNIQVPFTDIDLAVNWYKYLQQKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15623; Mature: 15623

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERGLLWLPLLGVFIWLSWAGWNEYQKLEAYRVWAKPFEKAKYDIYAVLGQNGESITWGK
CCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHCCCEEEEEEECCCCCEEECCC
PKRKEPVNLETFSLSDVRSLQLLVNNKLVDLENLPTRGKVVLEFIFSDSKNIQVPFTDID
CCCCCCCCEEEEECCHHHHHHHHHCCCEECCCCCCCCCCEEEEEEECCCCCEEEEECHHH
LAVNWYKYLQQKL
HHHHHHHHHHHCC
>Mature Secondary Structure
MERGLLWLPLLGVFIWLSWAGWNEYQKLEAYRVWAKPFEKAKYDIYAVLGQNGESITWGK
CCCCEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHCCCEEEEEEECCCCCEEECCC
PKRKEPVNLETFSLSDVRSLQLLVNNKLVDLENLPTRGKVVLEFIFSDSKNIQVPFTDID
CCCCCCCCEEEEECCHHHHHHHHHCCCEECCCCCCCCCCEEEEEEECCCCCEEEEECHHH
LAVNWYKYLQQKL
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA