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The map label for this gene is ybhK [C]

Identifier: 113475808

GI number: 113475808

Start: 3376185

End: 3377561

Strand: Reverse

Name: ybhK [C]

Synonym: Tery_2163

Alternate gene names: 113475808

Gene position: 3377561-3376185 (Counterclockwise)

Preceding gene: 113475812

Following gene: 113475807

Centisome position: 43.58

GC content: 39.65

Gene sequence:

>1377_bases
ATGTCAACTAGTTTATTTAAGAAAACTCTACGTATCTTTCTGAAGAAAAACTTCCCTATTACAAAACCTCAAAAAAGTAA
CTATCAAATAGTTAGTCAATGGTTCAAATGGCTCGCCCCAGGATTATTTGTCAAACGGTGGTTACTTTTAAGTGCTGCTG
GTGTACTACTAACTAGTTTAGGGCTGGCAATATGGACGGGAATGACTCCTATTTTTTACATCCTACAAACAATTAGGGAA
TTTTTAGGGTGGGTAACAACAATAGTCCCTAAGTACATTTCTGGCCCAATAATTATTGTTGTTGGCTTACTATTAATCTT
TCTAGGCCAAAACCGCAGCTTAAAAACTATTACCCAAGCGTTAATGCCAGAAGGAGATGAACAACTTGTAGACCGGTTAC
TCACTCATCGGCGATTAAATAAAGGTCCCAAAATTGTCGCTATTGGTGGGGGTACTGGTCTTTCCAACTTATTAAGGGGT
CTCAAGAGTTATAGTGCAAATATTACTGCTATTGTTACGGTGGCTGATGATGGTGGCTCTTCTGGTAGGTTGCGCCGAGA
AATAGGGGTACTCCCACCAGGAGATATTCGGAATTGTTTGGCGGCTTTAGCTAACGAGGAAAAGTTATTAACTGAATTAT
TTCAGTATCGCTTCAAGGCTGGTGATGGTTTGGTAGGGCATAGTTTTGGCAACTTGTTTCTGACAGCTATGAGTGAGGTG
ACAGGAGATTTGGAACGGGCTGTTGCTGCTAGTTCAAAGGTTTTAGCTGTCCAAGGTCAGGTTTTGCCTGCTACTCTTAC
TGATGTGTATTTGTGGGCAGAGTTAGCTGATGGACGACACATTGAGGGGGAGTCTAATATTACTGAAGCAGGGGGCAAAA
TTGTTAAAATTGGCTGTACTCCTGAACATCCTCCGGCTTTGCCTAAGGTTTTGCAAGCTATAGAAGAAGCTGACTATATT
ATTATTGGTCCTGGTAGTTTATATACTAGCGTTATTCCTAATTTATTAGTACCTGAAATTGCTGAGGCGATCGCTTGTAG
AAATATTCCTAGTATTTATGTTTGTAATATTATGACTCAGCCTGGAGAAACTACTGGATATAGTGTGGCTGACCATATTT
GTGCTATTGATGTTGCTTGTGGTCAAAGATTATTTGATACTGTTTTAGTACAGGGAAAAAGTCCTTCGGCACAAGCATTA
ATTAAGTATGCTCAAGAAAATTCTCATCCGGTTTTTCTTGACCGAGAAGCAGTTAACAATTTGGGGCGGAAAATTCTTTT
AACTAATGTTATGTATGAGGACGAACAAAATGGTTTTGTTCGCCATGATTCTACGATGTTGGCTCAGGTTTTATTTCAGT
GGTATAGTGGAAGTTAG

Upstream 100 bases:

>100_bases
TTTGAGTTTGCTAGATTTCATCTAAAACAAAGTTGGTCCTGAAGAGTCATAATAATGCCAGAATTCTTTTTATGTAAAAA
ATATTTTTATAAAAATTATT

Downstream 100 bases:

>100_bases
GATAAATTATCAATAACTGGAGATTATTTAGAGATTATTAGAGACTATCAGAGATTATAGCCACCGGTTACTAGTCCCCA
TCCCATCCGTAAAAGGGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 457

Protein sequence:

>458_residues
MSTSLFKKTLRIFLKKNFPITKPQKSNYQIVSQWFKWLAPGLFVKRWLLLSAAGVLLTSLGLAIWTGMTPIFYILQTIRE
FLGWVTTIVPKYISGPIIIVVGLLLIFLGQNRSLKTITQALMPEGDEQLVDRLLTHRRLNKGPKIVAIGGGTGLSNLLRG
LKSYSANITAIVTVADDGGSSGRLRREIGVLPPGDIRNCLAALANEEKLLTELFQYRFKAGDGLVGHSFGNLFLTAMSEV
TGDLERAVAASSKVLAVQGQVLPATLTDVYLWAELADGRHIEGESNITEAGGKIVKIGCTPEHPPALPKVLQAIEEADYI
IIGPGSLYTSVIPNLLVPEIAEAIACRNIPSIYVCNIMTQPGETTGYSVADHICAIDVACGQRLFDTVLVQGKSPSAQAL
IKYAQENSHPVFLDREAVNNLGRKILLTNVMYEDEQNGFVRHDSTMLAQVLFQWYSGS

Sequences:

>Translated_458_residues
MSTSLFKKTLRIFLKKNFPITKPQKSNYQIVSQWFKWLAPGLFVKRWLLLSAAGVLLTSLGLAIWTGMTPIFYILQTIRE
FLGWVTTIVPKYISGPIIIVVGLLLIFLGQNRSLKTITQALMPEGDEQLVDRLLTHRRLNKGPKIVAIGGGTGLSNLLRG
LKSYSANITAIVTVADDGGSSGRLRREIGVLPPGDIRNCLAALANEEKLLTELFQYRFKAGDGLVGHSFGNLFLTAMSEV
TGDLERAVAASSKVLAVQGQVLPATLTDVYLWAELADGRHIEGESNITEAGGKIVKIGCTPEHPPALPKVLQAIEEADYI
IIGPGSLYTSVIPNLLVPEIAEAIACRNIPSIYVCNIMTQPGETTGYSVADHICAIDVACGQRLFDTVLVQGKSPSAQAL
IKYAQENSHPVFLDREAVNNLGRKILLTNVMYEDEQNGFVRHDSTMLAQVLFQWYSGS
>Mature_457_residues
STSLFKKTLRIFLKKNFPITKPQKSNYQIVSQWFKWLAPGLFVKRWLLLSAAGVLLTSLGLAIWTGMTPIFYILQTIREF
LGWVTTIVPKYISGPIIIVVGLLLIFLGQNRSLKTITQALMPEGDEQLVDRLLTHRRLNKGPKIVAIGGGTGLSNLLRGL
KSYSANITAIVTVADDGGSSGRLRREIGVLPPGDIRNCLAALANEEKLLTELFQYRFKAGDGLVGHSFGNLFLTAMSEVT
GDLERAVAASSKVLAVQGQVLPATLTDVYLWAELADGRHIEGESNITEAGGKIVKIGCTPEHPPALPKVLQAIEEADYII
IGPGSLYTSVIPNLLVPEIAEAIACRNIPSIYVCNIMTQPGETTGYSVADHICAIDVACGQRLFDTVLVQGKSPSAQALI
KYAQENSHPVFLDREAVNNLGRKILLTNVMYEDEQNGFVRHDSTMLAQVLFQWYSGS

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=301, Percent_Identity=33.8870431893688, Blast_Score=140, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 50021; Mature: 49890

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSLFKKTLRIFLKKNFPITKPQKSNYQIVSQWFKWLAPGLFVKRWLLLSAAGVLLTSL
CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
GLAIWTGMTPIFYILQTIREFLGWVTTIVPKYISGPIIIVVGLLLIFLGQNRSLKTITQA
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHH
LMPEGDEQLVDRLLTHRRLNKGPKIVAIGGGTGLSNLLRGLKSYSANITAIVTVADDGGS
HCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEECCCCC
SGRLRREIGVLPPGDIRNCLAALANEEKLLTELFQYRFKAGDGLVGHSFGNLFLTAMSEV
CCCHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
TGDLERAVAASSKVLAVQGQVLPATLTDVYLWAELADGRHIEGESNITEAGGKIVKIGCT
HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEEEEECC
PEHPPALPKVLQAIEEADYIIIGPGSLYTSVIPNLLVPEIAEAIACRNIPSIYVCNIMTQ
CCCCCHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
PGETTGYSVADHICAIDVACGQRLFDTVLVQGKSPSAQALIKYAQENSHPVFLDREAVNN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHH
LGRKILLTNVMYEDEQNGFVRHDSTMLAQVLFQWYSGS
CCCEEEEHHHEEECCCCCCEECHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STSLFKKTLRIFLKKNFPITKPQKSNYQIVSQWFKWLAPGLFVKRWLLLSAAGVLLTSL
CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
GLAIWTGMTPIFYILQTIREFLGWVTTIVPKYISGPIIIVVGLLLIFLGQNRSLKTITQA
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHH
LMPEGDEQLVDRLLTHRRLNKGPKIVAIGGGTGLSNLLRGLKSYSANITAIVTVADDGGS
HCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEECCCCC
SGRLRREIGVLPPGDIRNCLAALANEEKLLTELFQYRFKAGDGLVGHSFGNLFLTAMSEV
CCCHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
TGDLERAVAASSKVLAVQGQVLPATLTDVYLWAELADGRHIEGESNITEAGGKIVKIGCT
HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEEEEECC
PEHPPALPKVLQAIEEADYIIIGPGSLYTSVIPNLLVPEIAEAIACRNIPSIYVCNIMTQ
CCCCCHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
PGETTGYSVADHICAIDVACGQRLFDTVLVQGKSPSAQALIKYAQENSHPVFLDREAVNN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHH
LGRKILLTNVMYEDEQNGFVRHDSTMLAQVLFQWYSGS
CCCEEEEHHHEEECCCCCCEECHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9794762; 11759840 [H]