| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475783
Identifier: 113475783
GI number: 113475783
Start: 3340972
End: 3341622
Strand: Reverse
Name: 113475783
Synonym: Tery_2137
Alternate gene names: NA
Gene position: 3341622-3340972 (Counterclockwise)
Preceding gene: 113475784
Following gene: 113475775
Centisome position: 43.12
GC content: 31.34
Gene sequence:
>651_bases ATGAAACAAAAATGTACTGATAAAGCAATAGCTAACAAAATTAAAAAATGGCTTCAAGTAGTATCTCAACTTAATAATGG AGATTTTATTTTTGCTATACCTACTACTCGTTTAACAAGTCTTAAAAGTCTAATTCAAGATAAAACAGCAGCAGAATTAT TTGCTTTTCATCTTGCTAAAAAATTACAGCAGGAGATGAATGAAGTTAAACGTTATAAAGAATTTACTCAAGAAGAATGG TCAATTCGCCTTAATTTGATTTCTGATACTGTTGCTCAAATGGAGGATTATTTAGCAGATCCTACTGCTGAAAAAAAGCA CTCTTTCTGGGAGTTGTTGAGAAGAATTGATGGTTTACAAAGTAATCATTATGGTAGGGTTAATTGGAGTACTGTAAGTT TTTTTCGTAGTGGTTATTTACTTAAGTTAGATTATGCTTTGCGCTGTTTTGTTGAACAAGATTTTTCTAGCTGGGCTTAT AAGTTGGCTATGGTATATGTTGTACGTTATGAGCCAAGTTATGGTAGTGGGTTAATTCCTGCTTCTGTTCCTATGTTATT AGAGGTGTCTGAGTTTTGGTGTAATTATTATTTTGATTGTTCTTTAATTGAGAAGTTTCCTCAAGATTTGAAAATAAGCT GTTTAAAATGA
Upstream 100 bases:
>100_bases ACAGATAGTTCAGTGTTAAAACTTGGTCAGGGATAATTTCTGGCTTTTAATTTGTGCATATTTTTATGACTATTATTTAA GCAGATTAAAATATATTCTG
Downstream 100 bases:
>100_bases ATAATTAGTTTTTTCCGAATTTAGGGAGGTTAAATGGAACATCTATAAAGAGGTCTACTATGCAGGAGTTTTTCTGTATG GGAGGCCTCTTTACGGGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MKQKCTDKAIANKIKKWLQVVSQLNNGDFIFAIPTTRLTSLKSLIQDKTAAELFAFHLAKKLQQEMNEVKRYKEFTQEEW SIRLNLISDTVAQMEDYLADPTAEKKHSFWELLRRIDGLQSNHYGRVNWSTVSFFRSGYLLKLDYALRCFVEQDFSSWAY KLAMVYVVRYEPSYGSGLIPASVPMLLEVSEFWCNYYFDCSLIEKFPQDLKISCLK
Sequences:
>Translated_216_residues MKQKCTDKAIANKIKKWLQVVSQLNNGDFIFAIPTTRLTSLKSLIQDKTAAELFAFHLAKKLQQEMNEVKRYKEFTQEEW SIRLNLISDTVAQMEDYLADPTAEKKHSFWELLRRIDGLQSNHYGRVNWSTVSFFRSGYLLKLDYALRCFVEQDFSSWAY KLAMVYVVRYEPSYGSGLIPASVPMLLEVSEFWCNYYFDCSLIEKFPQDLKISCLK >Mature_216_residues MKQKCTDKAIANKIKKWLQVVSQLNNGDFIFAIPTTRLTSLKSLIQDKTAAELFAFHLAKKLQQEMNEVKRYKEFTQEEW SIRLNLISDTVAQMEDYLADPTAEKKHSFWELLRRIDGLQSNHYGRVNWSTVSFFRSGYLLKLDYALRCFVEQDFSSWAY KLAMVYVVRYEPSYGSGLIPASVPMLLEVSEFWCNYYFDCSLIEKFPQDLKISCLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25324; Mature: 25324
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQKCTDKAIANKIKKWLQVVSQLNNGDFIFAIPTTRLTSLKSLIQDKTAAELFAFHLAK CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH KLQQEMNEVKRYKEFTQEEWSIRLNLISDTVAQMEDYLADPTAEKKHSFWELLRRIDGLQ HHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC SNHYGRVNWSTVSFFRSGYLLKLDYALRCFVEQDFSSWAYKLAMVYVVRYEPSYGSGLIP CCCCCCEEHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCC ASVPMLLEVSEFWCNYYFDCSLIEKFPQDLKISCLK CCHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEECCC >Mature Secondary Structure MKQKCTDKAIANKIKKWLQVVSQLNNGDFIFAIPTTRLTSLKSLIQDKTAAELFAFHLAK CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH KLQQEMNEVKRYKEFTQEEWSIRLNLISDTVAQMEDYLADPTAEKKHSFWELLRRIDGLQ HHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC SNHYGRVNWSTVSFFRSGYLLKLDYALRCFVEQDFSSWAYKLAMVYVVRYEPSYGSGLIP CCCCCCEEHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCC ASVPMLLEVSEFWCNYYFDCSLIEKFPQDLKISCLK CCHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA