Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475726

Identifier: 113475726

GI number: 113475726

Start: 3237753

End: 3238223

Strand: Reverse

Name: 113475726

Synonym: Tery_2073

Alternate gene names: NA

Gene position: 3238223-3237753 (Counterclockwise)

Preceding gene: 113475727

Following gene: 113475725

Centisome position: 41.78

GC content: 36.52

Gene sequence:

>471_bases
ATGATTGCTAATCAAGAAACCATAGAAAAATCCTCCAATCAAAGTCTAGAACCACAAGTTTTTCAACTTAAAACCCAGCT
TTTGAGTAAAGGCCGGAGCGACTATACTATTGCGAAAACTGATTTAATGAGCGTGAGAATTAAATGTTACGCTCAAGGAG
GAGAAAATGTTTTGCACTCTCATCCAGGAGAGGATCATACTTTTATTGTTTTAGCAGGAAAAGCCAGATTTTTTGGCAAA
GATGGTGAAGTTGGTGTCTTTTCTATAAATCAAGGTATTATGCTTCCCAGAGGATGCTTTTATAAGTTTCAAAGTTGTGG
AGATGAACCTCTTGTCTTGTTACGGGTAGGCGCAGAAAAAGACAAACTTCCAGTTCATCGTATAGGTGTTGATGGTAATT
CATTACCAGGAAAATCTAAGGAAAATAAACATGAAGATGGTGTGCCAATAGAAGGATTATTTTATGAATAG

Upstream 100 bases:

>100_bases
TGATTATAAAGATATTCTAGGATATTTTCGGATATTGGGGACAGGGTATGTATAATTAATAGTTAGGAATTTGTATTAAT
TTTTATTTTAAAAATCTCTT

Downstream 100 bases:

>100_bases
CTTACTGTCTGATACAGGGAGGACGGTAAATTTTTTTCTGAATTAATTTTGTTGAGATTTGTTCTTTAGAAACTACTAAA
TTAACTAAATGTTTCTATGG

Product: cupin 2 barrel domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MIANQETIEKSSNQSLEPQVFQLKTQLLSKGRSDYTIAKTDLMSVRIKCYAQGGENVLHSHPGEDHTFIVLAGKARFFGK
DGEVGVFSINQGIMLPRGCFYKFQSCGDEPLVLLRVGAEKDKLPVHRIGVDGNSLPGKSKENKHEDGVPIEGLFYE

Sequences:

>Translated_156_residues
MIANQETIEKSSNQSLEPQVFQLKTQLLSKGRSDYTIAKTDLMSVRIKCYAQGGENVLHSHPGEDHTFIVLAGKARFFGK
DGEVGVFSINQGIMLPRGCFYKFQSCGDEPLVLLRVGAEKDKLPVHRIGVDGNSLPGKSKENKHEDGVPIEGLFYE
>Mature_156_residues
MIANQETIEKSSNQSLEPQVFQLKTQLLSKGRSDYTIAKTDLMSVRIKCYAQGGENVLHSHPGEDHTFIVLAGKARFFGK
DGEVGVFSINQGIMLPRGCFYKFQSCGDEPLVLLRVGAEKDKLPVHRIGVDGNSLPGKSKENKHEDGVPIEGLFYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17253; Mature: 17253

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIANQETIEKSSNQSLEPQVFQLKTQLLSKGRSDYTIAKTDLMSVRIKCYAQGGENVLHS
CCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEEECCCCCCCCC
HPGEDHTFIVLAGKARFFGKDGEVGVFSINQGIMLPRGCFYKFQSCGDEPLVLLRVGAEK
CCCCCCEEEEEECCEEEECCCCCEEEEEECCCEECCCHHHHHHHCCCCCCEEEEEECCCC
DKLPVHRIGVDGNSLPGKSKENKHEDGVPIEGLFYE
CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEECC
>Mature Secondary Structure
MIANQETIEKSSNQSLEPQVFQLKTQLLSKGRSDYTIAKTDLMSVRIKCYAQGGENVLHS
CCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEEEECCCCCCCCC
HPGEDHTFIVLAGKARFFGKDGEVGVFSINQGIMLPRGCFYKFQSCGDEPLVLLRVGAEK
CCCCCCEEEEEECCEEEECCCCCEEEEEECCCEECCCHHHHHHHCCCCCCEEEEEECCCC
DKLPVHRIGVDGNSLPGKSKENKHEDGVPIEGLFYE
CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA