Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113475625
Identifier: 113475625
GI number: 113475625
Start: 3038599
End: 3038775
Strand: Reverse
Name: 113475625
Synonym: Tery_1960
Alternate gene names: NA
Gene position: 3038775-3038599 (Counterclockwise)
Preceding gene: 113475626
Following gene: 113475624
Centisome position: 39.21
GC content: 37.85
Gene sequence:
>177_bases ATGTATAATAATCATTCAAACCGTGACCCATTAGTTGTAGCTATTACTGCTGGTTTAGGAGCTGGTGTCGTTACTTCTTT TGCTATTAGTCAAGGCCAAAATCCCTTAACTGCTCTGGGAATTACTATTTTTGCTGCTATCGTAGTTTTAATTTGTGATC GCGCTGGTTTAGTTTGA
Upstream 100 bases:
>100_bases ATTCAGATCCCCAAGGGATGGTCAGTTTCTGATCAGGGAAATTTCAAACCTTCAAACAACTTTGATATAAATTGTTTAAC AAAAATATCCTGGGTTAAAA
Downstream 100 bases:
>100_bases GTAAAGGAAGTGTAATTTAAGGATAATAATATTTCTTAACTTTTGGTGATTTTTCAATCCTAAAACAATTATAGGTATAC TTACTGTAGTTATACAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 58; Mature: 58
Protein sequence:
>58_residues MYNNHSNRDPLVVAITAGLGAGVVTSFAISQGQNPLTALGITIFAAIVVLICDRAGLV
Sequences:
>Translated_58_residues MYNNHSNRDPLVVAITAGLGAGVVTSFAISQGQNPLTALGITIFAAIVVLICDRAGLV >Mature_58_residues MYNNHSNRDPLVVAITAGLGAGVVTSFAISQGQNPLTALGITIFAAIVVLICDRAGLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5925; Mature: 5925
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNNHSNRDPLVVAITAGLGAGVVTSFAISQGQNPLTALGITIFAAIVVLICDRAGLV CCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MYNNHSNRDPLVVAITAGLGAGVVTSFAISQGQNPLTALGITIFAAIVVLICDRAGLV CCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA