Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is fur [H]

Identifier: 113475618

GI number: 113475618

Start: 3027869

End: 3028264

Strand: Reverse

Name: fur [H]

Synonym: Tery_1953

Alternate gene names: 113475618

Gene position: 3028264-3027869 (Counterclockwise)

Preceding gene: 113475621

Following gene: 113475615

Centisome position: 39.07

GC content: 34.34

Gene sequence:

>396_bases
ATGAAAACCAAGCGCACCCATTCTCAAGAACGTATTTTAAAATTACTAAAAAACCAGAAGCGATCGCTATCTGCTCAAGA
TATTTATTTAAAACTACGCAGATATGACAGACCTCTGGGGCTAGCAACAATATATCGTTCTTTGGATGCTCTCAAAAAAG
AGGGTGTAGTAATTGTTCGGACTTTGGTCAATGGTGAATCTGTTTATAGTTGTCTACAGCAAGACCAATATTATTTGAAT
TGTGTTAAATGTGGGACTTCTATACCTATTAATAAATGTCCTGTCTACAATTTGGAGGATAAATTACAGCAGTCCTACAA
ATTTAAGATTTTTTACCATACTTTGGAATTTTTTGGGCTTTGTGAACGCTGTACCTTAACTGAAGATATTTCTTAA

Upstream 100 bases:

>100_bases
TGATATTTTTTGATCACTTTAGTACAAAGTTTTAGATTTTAATTGAACTACTCACTCAGATATTATCTGTTAAGTTTAAC
CTAAATTAACTATATTGGCC

Downstream 100 bases:

>100_bases
CATTCTCCCCAGCTATTAGTTTGGGGTAGTCTTACAATCTAAAGCTAATAAAATACGGATTGACCTTTATCTTAGTCTAC
TCCAAAGGTTGGCCCTAGTC

Product: ferric uptake regulator family protein

Products: NA

Alternate protein names: Ferric uptake regulator [H]

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MKTKRTHSQERILKLLKNQKRSLSAQDIYLKLRRYDRPLGLATIYRSLDALKKEGVVIVRTLVNGESVYSCLQQDQYYLN
CVKCGTSIPINKCPVYNLEDKLQQSYKFKIFYHTLEFFGLCERCTLTEDIS

Sequences:

>Translated_131_residues
MKTKRTHSQERILKLLKNQKRSLSAQDIYLKLRRYDRPLGLATIYRSLDALKKEGVVIVRTLVNGESVYSCLQQDQYYLN
CVKCGTSIPINKCPVYNLEDKLQQSYKFKIFYHTLEFFGLCERCTLTEDIS
>Mature_131_residues
MKTKRTHSQERILKLLKNQKRSLSAQDIYLKLRRYDRPLGLATIYRSLDALKKEGVVIVRTLVNGESVYSCLQQDQYYLN
CVKCGTSIPINKCPVYNLEDKLQQSYKFKIFYHTLEFFGLCERCTLTEDIS

Specific function: Iron uptake repressor. Acts on the transcription of ferri-siderophore uptake genes [H]

COG id: COG0735

COG function: function code P; Fe2+/Zn2+ uptake regulation proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Fur family [H]

Homologues:

None

Paralogues:

None

Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002481 [H]

Pfam domain/function: PF01475 FUR [H]

EC number: NA

Molecular weight: Translated: 15380; Mature: 15380

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKRTHSQERILKLLKNQKRSLSAQDIYLKLRRYDRPLGLATIYRSLDALKKEGVVIVR
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEE
TLVNGESVYSCLQQDQYYLNCVKCGTSIPINKCPVYNLEDKLQQSYKFKIFYHTLEFFGL
EECCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
CERCTLTEDIS
HHHCCCCCCCC
>Mature Secondary Structure
MKTKRTHSQERILKLLKNQKRSLSAQDIYLKLRRYDRPLGLATIYRSLDALKKEGVVIVR
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEE
TLVNGESVYSCLQQDQYYLNCVKCGTSIPINKCPVYNLEDKLQQSYKFKIFYHTLEFFGL
EECCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
CERCTLTEDIS
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 9701813 [H]