Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113475610
Identifier: 113475610
GI number: 113475610
Start: 3014153
End: 3014392
Strand: Reverse
Name: 113475610
Synonym: Tery_1944
Alternate gene names: NA
Gene position: 3014392-3014153 (Counterclockwise)
Preceding gene: 113475613
Following gene: 113475609
Centisome position: 38.89
GC content: 39.17
Gene sequence:
>240_bases TTGCGTCGAAACCTTCCAACTATTATGGGAAATAGTGGATCTCAAGGAGATGCTACTTTGACGTCACTGATGGCTGGAAA GTTACTCCAAGTTTTCTTCCGGATGGAGTTGTTAGCAAAATTTACATCAGTTGAGTTGAGGGAGAAAACACCAAAGTATG AGATAATCTTGCTTGCTCAAAGAAAAACCCTTTGTTGCTCTAAGTCTGAAATGATGCTGAGAAATTCAGTGAGTCAATAA
Upstream 100 bases:
>100_bases ACTAGAAGTCTCTGTGAGATCAAAAAAAAACAAAATTTTGCTCTCAAAAGTTGTAGCTCCTATATGAAAAAGTCATAAAA GGAAGGTTACTTGAAGATCA
Downstream 100 bases:
>100_bases TCTCACTATCTCAAATTTAGAAGTGTTCCTATACCTTATACTGAGAAGACTCAGCAATTTAAGCACGAAACAGCGGTCGC ATTTTTTCCTAGTCATATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MRRNLPTIMGNSGSQGDATLTSLMAGKLLQVFFRMELLAKFTSVELREKTPKYEIILLAQRKTLCCSKSEMMLRNSVSQ
Sequences:
>Translated_79_residues MRRNLPTIMGNSGSQGDATLTSLMAGKLLQVFFRMELLAKFTSVELREKTPKYEIILLAQRKTLCCSKSEMMLRNSVSQ >Mature_79_residues MRRNLPTIMGNSGSQGDATLTSLMAGKLLQVFFRMELLAKFTSVELREKTPKYEIILLAQRKTLCCSKSEMMLRNSVSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8943; Mature: 8943
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 7.6 %Met (Translated Protein) 10.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 7.6 %Met (Mature Protein) 10.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRNLPTIMGNSGSQGDATLTSLMAGKLLQVFFRMELLAKFTSVELREKTPKYEIILLAQ CCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC RKTLCCSKSEMMLRNSVSQ CCCHHCCHHHHHHHHCCCC >Mature Secondary Structure MRRNLPTIMGNSGSQGDATLTSLMAGKLLQVFFRMELLAKFTSVELREKTPKYEIILLAQ CCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEC RKTLCCSKSEMMLRNSVSQ CCCHHCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA