Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113475609
Identifier: 113475609
GI number: 113475609
Start: 3010874
End: 3013549
Strand: Reverse
Name: 113475609
Synonym: Tery_1943
Alternate gene names: NA
Gene position: 3013549-3010874 (Counterclockwise)
Preceding gene: 113475610
Following gene: 113475607
Centisome position: 38.88
GC content: 35.09
Gene sequence:
>2676_bases ATGATTATGAATACTCAAAACCATAACATTTTGACTCAAGAAGAACAAAGACTGGAAGCAGATCTTAACCATAAAGCATA CTGGCAACGTTGGGGACCTTATTTGAGTGAGAGACAATGGGGAACAGTACGGGAAGACTATAGCGAAGATGGTTCTGCTT GGGATTATTTTTCCCACGAACAATCTCATTATCGTGCTTATAGATGGGGAGAGGATGGTATTTGTGGTATTTCTGATAAT CATCAACGACTGTGTTTTGCGATCGCTCTTTGGAATGGCGAAGATCTAATGCTCAAAGAACGACTTTTTGGTTTAACTGG CACTCAAGGAAATCATGGTGAAGATGTCAAAGAGTATTATTTTTATTTAGATAATACCCCCAGCCATAGTTATATGAAGG CACTTTATAAGTATCCCCAAGCTGCTTTTCCCTATACTGAGTTATTAACAGAAAATCAACAGCGCGATGGTAAGTCTTTA GAATATGAATTGCTTGATACTGGAGTCTTTGCTGAAAATCGTTATTTTGATGTCTTTGTTGAATATGCTAAAGCTACAGC GGAAGATATTCTGATTAAAATTACAGTAAATAACTTAGCTTCAGAAACTAAAACGTTACACTTATTACCCACTCTCTGGT TTAGAAATACTTGGTCTTGGACTCAAGATTCAGAGAAGCCTATCCTCAAAAAAATTAATCATGGTCTCGTTGAAGCTAAC CACCCTACTTTAGGTAAAAGGTGGCTTTATTTTTCGGAAACTATGGAACTATTTTTTACTGAGAATGAAACAAATGCACA ACGTTTATCTGGAGAAAAAAATACTTCTCCTTATGTGAAAGATGGCATCAATAATTATTTAGTAAATGGTCAAAAAGATG CTATTAATCCTAATATGTCTGGCACAAAGTTTGCTCCACATTATCTTTTAGAACTAAAACCAGGTGAAACTAAAACTATT AAATTAAGACTTGCTAATTCTTCAGAAATTAGACAACCATTTGATGCCAAGTTTGACGATACTTTTCAAAGAAGAATTCA GGAAGCAGATGAATTTTATCAGAGGATTTCTCCCTGTAAAATGAAGGATGAATTGCGAAATATTCAGCGTCAAGCTTTTG CTGGATTATTATGGACAAAACAATATTATCATTATGTTGTAGAAGATTGGTTAAAAGGGGATTTTCAAGAGCCGTCAATA TTAGAAAATAGGAAAAATATTAGAAATTCTGAGTGGATTCATCTATTTAATGATGATATAATTTCTATGCCTGACAAATG GGAATATCCTTGGTATGCTGTTTGGGATTTAGCCTTTCATACTATACCTTTAGCAATAATTGATCCTAATTTTGCTAAAC ATCAATTAGACTTAATTACTAGGGAATGGTATATGCACCCCAACGGTCAATTACCAGCTTATGAATGGAATTTTAATGAT GTCAATCCTCCGGTTCATGCTTGGGGAACTTGGAGAGTTTATCAGATAGAAAAAGAAGTTTATGGTCGCCAGGATAGAAA GTTTCTCGAAAGAGTATTTCAAAAGCTTTTACTCAATTTTACTTGGTGGGTTAACCAGAAAGATATTGAGGGAAATAATG TTTTTGAAGGAGGCTTTTTAGGATTAGATAATATTGGGGTATTTAACCGGAGTTCTGAACTACCAACTGGAGGGCATATT GAACAATCAGATGGTACAAGTTGGATGGCAATGTTTTGTTTGGATATGTTAAAAATTGCTCTGGAACTTGCCCTCGAAAA TGATGTTTATGAAGATATTGCGTCTAAGTTTTTTGAGCATTTTCTCTACATTGTAGATGCCATGAATCATTTAGGTCCTG GTGGTACTCAACTTTGGGACGAAACTGATAATTTTTATTATGATGTTTTGCATGAACCAGGAAAGGAAGATATACACTTA AAAGTTCGTTCTATAGTAGGATTAATACCATTATTTGCTGTAGCAATTATTGACTCAGAAACTTTGCAAAAATTACCGAA ATTCAAAAAAAGAGTCAACTGGTTTATGCAAAATAGAGTTGATCTTAGTGCTAATATTGCTTGTCTGGAAGCTTGTGGAA TTGAATCAGAACGCTTACTCGCTATTGTTAGTCCGGAAAGGCTGAAAATTATCCTGGAAAAAATGTTAGATGAAAATGAG TTTTTTAGTGATTATGGCGTTCGTTCTTTGTCTCGTTACCATGCGGAAAATCCTTATATTTTTTATGCTGATGAAGATGA ATACAGAGTAGATTATGAACCTGCTGAATCTGTTAGTGCAATGTTTGGAGGAAACTCTAATTGGCGAGGTCCTATATGGT TTCCAATCAATCATTTAATGATAGAGTCTCTGCAAAGGTTTCATAATTATTTAGGTGATGATTTTCGGGTAGAATGTCCG ACTGGTTCTGGTCAGATGATGAATTTGTGGGAAGTATCATTAGAAATTGAAGCGAGACTAATTAACATTTTCCTTAAAGA TAAAAATGGAAAACGTCCGGTTTATGGAGATACGGAAATGTTCCAAAATGACGATCACTGGCAAGATTTAATTCTGTTTT ATGAATATTTTCATGGTGATAAGGGTGCGGGTTTAGGTGCAAATCATCAGACTGGTTGGACTGGTTTGGTGGCGAAATTG ATTCAGCAGCGGAGTGAGTATAGTTGTGAGATTTAG
Upstream 100 bases:
>100_bases GTTATAAAACGATCCTAATAAAGATAAAAAAGATCATTTTGTTACAAATACTTGAGGACAGTTATAGTAAATTAAGATTC TAAGCCATTCTAAAGTATCA
Downstream 100 bases:
>100_bases TTGTCTTGCTGGTTGATCTTAAGTCTCTGTAGATTCCTAATTATGGGATTTTGGGCAGGTAGAGAGGCCGGGAGATGTGT TTTTGGGAAAGATGGAGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 891; Mature: 891
Protein sequence:
>891_residues MIMNTQNHNILTQEEQRLEADLNHKAYWQRWGPYLSERQWGTVREDYSEDGSAWDYFSHEQSHYRAYRWGEDGICGISDN HQRLCFAIALWNGEDLMLKERLFGLTGTQGNHGEDVKEYYFYLDNTPSHSYMKALYKYPQAAFPYTELLTENQQRDGKSL EYELLDTGVFAENRYFDVFVEYAKATAEDILIKITVNNLASETKTLHLLPTLWFRNTWSWTQDSEKPILKKINHGLVEAN HPTLGKRWLYFSETMELFFTENETNAQRLSGEKNTSPYVKDGINNYLVNGQKDAINPNMSGTKFAPHYLLELKPGETKTI KLRLANSSEIRQPFDAKFDDTFQRRIQEADEFYQRISPCKMKDELRNIQRQAFAGLLWTKQYYHYVVEDWLKGDFQEPSI LENRKNIRNSEWIHLFNDDIISMPDKWEYPWYAVWDLAFHTIPLAIIDPNFAKHQLDLITREWYMHPNGQLPAYEWNFND VNPPVHAWGTWRVYQIEKEVYGRQDRKFLERVFQKLLLNFTWWVNQKDIEGNNVFEGGFLGLDNIGVFNRSSELPTGGHI EQSDGTSWMAMFCLDMLKIALELALENDVYEDIASKFFEHFLYIVDAMNHLGPGGTQLWDETDNFYYDVLHEPGKEDIHL KVRSIVGLIPLFAVAIIDSETLQKLPKFKKRVNWFMQNRVDLSANIACLEACGIESERLLAIVSPERLKIILEKMLDENE FFSDYGVRSLSRYHAENPYIFYADEDEYRVDYEPAESVSAMFGGNSNWRGPIWFPINHLMIESLQRFHNYLGDDFRVECP TGSGQMMNLWEVSLEIEARLINIFLKDKNGKRPVYGDTEMFQNDDHWQDLILFYEYFHGDKGAGLGANHQTGWTGLVAKL IQQRSEYSCEI
Sequences:
>Translated_891_residues MIMNTQNHNILTQEEQRLEADLNHKAYWQRWGPYLSERQWGTVREDYSEDGSAWDYFSHEQSHYRAYRWGEDGICGISDN HQRLCFAIALWNGEDLMLKERLFGLTGTQGNHGEDVKEYYFYLDNTPSHSYMKALYKYPQAAFPYTELLTENQQRDGKSL EYELLDTGVFAENRYFDVFVEYAKATAEDILIKITVNNLASETKTLHLLPTLWFRNTWSWTQDSEKPILKKINHGLVEAN HPTLGKRWLYFSETMELFFTENETNAQRLSGEKNTSPYVKDGINNYLVNGQKDAINPNMSGTKFAPHYLLELKPGETKTI KLRLANSSEIRQPFDAKFDDTFQRRIQEADEFYQRISPCKMKDELRNIQRQAFAGLLWTKQYYHYVVEDWLKGDFQEPSI LENRKNIRNSEWIHLFNDDIISMPDKWEYPWYAVWDLAFHTIPLAIIDPNFAKHQLDLITREWYMHPNGQLPAYEWNFND VNPPVHAWGTWRVYQIEKEVYGRQDRKFLERVFQKLLLNFTWWVNQKDIEGNNVFEGGFLGLDNIGVFNRSSELPTGGHI EQSDGTSWMAMFCLDMLKIALELALENDVYEDIASKFFEHFLYIVDAMNHLGPGGTQLWDETDNFYYDVLHEPGKEDIHL KVRSIVGLIPLFAVAIIDSETLQKLPKFKKRVNWFMQNRVDLSANIACLEACGIESERLLAIVSPERLKIILEKMLDENE FFSDYGVRSLSRYHAENPYIFYADEDEYRVDYEPAESVSAMFGGNSNWRGPIWFPINHLMIESLQRFHNYLGDDFRVECP TGSGQMMNLWEVSLEIEARLINIFLKDKNGKRPVYGDTEMFQNDDHWQDLILFYEYFHGDKGAGLGANHQTGWTGLVAKL IQQRSEYSCEI >Mature_891_residues MIMNTQNHNILTQEEQRLEADLNHKAYWQRWGPYLSERQWGTVREDYSEDGSAWDYFSHEQSHYRAYRWGEDGICGISDN HQRLCFAIALWNGEDLMLKERLFGLTGTQGNHGEDVKEYYFYLDNTPSHSYMKALYKYPQAAFPYTELLTENQQRDGKSL EYELLDTGVFAENRYFDVFVEYAKATAEDILIKITVNNLASETKTLHLLPTLWFRNTWSWTQDSEKPILKKINHGLVEAN HPTLGKRWLYFSETMELFFTENETNAQRLSGEKNTSPYVKDGINNYLVNGQKDAINPNMSGTKFAPHYLLELKPGETKTI KLRLANSSEIRQPFDAKFDDTFQRRIQEADEFYQRISPCKMKDELRNIQRQAFAGLLWTKQYYHYVVEDWLKGDFQEPSI LENRKNIRNSEWIHLFNDDIISMPDKWEYPWYAVWDLAFHTIPLAIIDPNFAKHQLDLITREWYMHPNGQLPAYEWNFND VNPPVHAWGTWRVYQIEKEVYGRQDRKFLERVFQKLLLNFTWWVNQKDIEGNNVFEGGFLGLDNIGVFNRSSELPTGGHI EQSDGTSWMAMFCLDMLKIALELALENDVYEDIASKFFEHFLYIVDAMNHLGPGGTQLWDETDNFYYDVLHEPGKEDIHL KVRSIVGLIPLFAVAIIDSETLQKLPKFKKRVNWFMQNRVDLSANIACLEACGIESERLLAIVSPERLKIILEKMLDENE FFSDYGVRSLSRYHAENPYIFYADEDEYRVDYEPAESVSAMFGGNSNWRGPIWFPINHLMIESLQRFHNYLGDDFRVECP TGSGQMMNLWEVSLEIEARLINIFLKDKNGKRPVYGDTEMFQNDDHWQDLILFYEYFHGDKGAGLGANHQTGWTGLVAKL IQQRSEYSCEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6323852, Length=932, Percent_Identity=52.0386266094421, Blast_Score=941, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 104653; Mature: 104653
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMNTQNHNILTQEEQRLEADLNHKAYWQRWGPYLSERQWGTVREDYSEDGSAWDYFSHE CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCC QSHYRAYRWGEDGICGISDNHQRLCFAIALWNGEDLMLKERLFGLTGTQGNHGEDVKEYY HHHCEEEECCCCCEECCCCCCCEEEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCEEEE FYLDNTPSHSYMKALYKYPQAAFPYTELLTENQQRDGKSLEYELLDTGVFAENRYFDVFV EEECCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCEECCCCHHHHHH EYAKATAEDILIKITVNNLASETKTLHLLPTLWFRNTWSWTQDSEKPILKKINHGLVEAN HHHHCCCCCEEEEEEECHHCCCCCEEEEEEHHHHCCCCCCCCCCCCHHHHHHCCCCEECC HPTLGKRWLYFSETMELFFTENETNAQRLSGEKNTSPYVKDGINNYLVNGQKDAINPNMS CCCCCCEEEEEECEEEEEEECCCCCHHHHCCCCCCCCHHHHCCCHHEECCCCCCCCCCCC GTKFAPHYLLELKPGETKTIKLRLANSSEIRQPFDAKFDDTFQRRIQEADEFYQRISPCK CCCCCCEEEEEECCCCCEEEEEEECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC MKDELRNIQRQAFAGLLWTKQYYHYVVEDWLKGDFQEPSILENRKNIRNSEWIHLFNDDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCE ISMPDKWEYPWYAVWDLAFHTIPLAIIDPNFAKHQLDLITREWYMHPNGQLPAYEWNFND ECCCCCCCCCCEEEHHHHHHHEEEEEECCCHHHHHHHHHHHHEEECCCCCCCEEECCCCC VNPPVHAWGTWRVYQIEKEVYGRQDRKFLERVFQKLLLNFTWWVNQKDIEGNNVFEGGFL CCCCCCCCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEECCCCC GLDNIGVFNRSSELPTGGHIEQSDGTSWMAMFCLDMLKIALELALENDVYEDIASKFFEH CCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLYIVDAMNHLGPGGTQLWDETDNFYYDVLHEPGKEDIHLKVRSIVGLIPLFAVAIIDSE HHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHCCH TLQKLPKFKKRVNWFMQNRVDLSANIACLEACGIESERLLAIVSPERLKIILEKMLDENE HHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHCCCCCCCEEEEECCHHHHHHHHHHHCCCH FFSDYGVRSLSRYHAENPYIFYADEDEYRVDYEPAESVSAMFGGNSNWRGPIWFPINHLM HHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCCHHHHHHHHCCCCCCCCCEEECHHHHH IESLQRFHNYLGDDFRVECPTGSGQMMNLWEVSLEIEARLINIFLKDKNGKRPVYGDTEM HHHHHHHHHHCCCCEEEECCCCCCCEEEEEEEEEEEEEEEEEEEEECCCCCCCCCCCHHH FQNDDHWQDLILFYEYFHGDKGAGLGANHQTGWTGLVAKLIQQRSEYSCEI HCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIMNTQNHNILTQEEQRLEADLNHKAYWQRWGPYLSERQWGTVREDYSEDGSAWDYFSHE CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCC QSHYRAYRWGEDGICGISDNHQRLCFAIALWNGEDLMLKERLFGLTGTQGNHGEDVKEYY HHHCEEEECCCCCEECCCCCCCEEEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCEEEE FYLDNTPSHSYMKALYKYPQAAFPYTELLTENQQRDGKSLEYELLDTGVFAENRYFDVFV EEECCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEEEEECCEECCCCHHHHHH EYAKATAEDILIKITVNNLASETKTLHLLPTLWFRNTWSWTQDSEKPILKKINHGLVEAN HHHHCCCCCEEEEEEECHHCCCCCEEEEEEHHHHCCCCCCCCCCCCHHHHHHCCCCEECC HPTLGKRWLYFSETMELFFTENETNAQRLSGEKNTSPYVKDGINNYLVNGQKDAINPNMS CCCCCCEEEEEECEEEEEEECCCCCHHHHCCCCCCCCHHHHCCCHHEECCCCCCCCCCCC GTKFAPHYLLELKPGETKTIKLRLANSSEIRQPFDAKFDDTFQRRIQEADEFYQRISPCK CCCCCCEEEEEECCCCCEEEEEEECCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC MKDELRNIQRQAFAGLLWTKQYYHYVVEDWLKGDFQEPSILENRKNIRNSEWIHLFNDDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCE ISMPDKWEYPWYAVWDLAFHTIPLAIIDPNFAKHQLDLITREWYMHPNGQLPAYEWNFND ECCCCCCCCCCEEEHHHHHHHEEEEEECCCHHHHHHHHHHHHEEECCCCCCCEEECCCCC VNPPVHAWGTWRVYQIEKEVYGRQDRKFLERVFQKLLLNFTWWVNQKDIEGNNVFEGGFL CCCCCCCCCCEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEECCCCC GLDNIGVFNRSSELPTGGHIEQSDGTSWMAMFCLDMLKIALELALENDVYEDIASKFFEH CCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLYIVDAMNHLGPGGTQLWDETDNFYYDVLHEPGKEDIHLKVRSIVGLIPLFAVAIIDSE HHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHCCH TLQKLPKFKKRVNWFMQNRVDLSANIACLEACGIESERLLAIVSPERLKIILEKMLDENE HHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHCCCCCCCEEEEECCHHHHHHHHHHHCCCH FFSDYGVRSLSRYHAENPYIFYADEDEYRVDYEPAESVSAMFGGNSNWRGPIWFPINHLM HHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCCHHHHHHHHCCCCCCCCCEEECHHHHH IESLQRFHNYLGDDFRVECPTGSGQMMNLWEVSLEIEARLINIFLKDKNGKRPVYGDTEM HHHHHHHHHHCCCCEEEECCCCCCCEEEEEEEEEEEEEEEEEEEEECCCCCCCCCCCHHH FQNDDHWQDLILFYEYFHGDKGAGLGANHQTGWTGLVAKLIQQRSEYSCEI HCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA