| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113475599
Identifier: 113475599
GI number: 113475599
Start: 2996534
End: 2998090
Strand: Reverse
Name: 113475599
Synonym: Tery_1932
Alternate gene names: NA
Gene position: 2998090-2996534 (Counterclockwise)
Preceding gene: 113475606
Following gene: 113475598
Centisome position: 38.68
GC content: 34.81
Gene sequence:
>1557_bases ATGAAAGGTACACAACAATCTTTATTTCCAAGCAGAACTACTACCCAATTAGTAGAAGATATAAAAAAGCTAACTACAGA AATTCAAGAACTATATTGTTTAGATTCTATTCCCTGGGTTATTGGATATTCAGGGGGTAAAGATAGTACCGCAACATTGC AGCTTATATGGAATGCGATCGCCGAACTTCCCCAAAAAAAACGAATTAAAACTATCCACGTTATTACCACAGATACATTA GTAGAAAATCCCATTGTTTCTGCTTGGGTAACTAACTCTTTACAGTTGATGAAAGAGTCTGCAAAAAATCAGAAACTACC TATAGAATGTCATTTATTAAAACCAGCAGTTAAACAAACATACTGGGTAGGACTACTTGGTAAAGGATACCCAGCTCCAC GTCATACATTTCGCTGGTGTACTCCCCGTTTAAAAATAGATCCATCCAATCTTTTTATTCGTAATGTTGTTAGAAATAAT GGGGAAACAATAGTTGTTTTAGGAACTCGTAAAGCAGAAAGTGCTAATCGTTTAGCAATAATGAATAAACGAGAAATTGG TAGATTAAGAAACCATCTAAGCCCTCATCCTAGTCTCCTTAATTCTTTGCTTTATACTCCTATTGAAGACTGGCGAACTG ATGAAGTTTGGCTATATTTAATGCAATGGGAAAATCCTTGGGAAAATAGTAATAAAGATTTACTAGCAATGTATCGAGGT GCAACAGAAGATAATGAATGTCCCTTAGTGGTTGATACCTCTACTCCTAGTTGTGGAAGTTCTCGTTTTGGATGTTGGGT TTGTACCTTAGTAGATAGTGATAAATCTATGTCAGCAATGATTCAAAATGATGAAGAAAAAGAATGGTTACAACCTCTAA TAAATTTGCGTCAAGAACTAGATATTTCTGACAGAGATAAAAGAGATTTTCGGCGAATTTGGGGAAAAGTTCAACTCTTT GAACGGAATATAAATGGTGAAGTTTCTGTAGAACCAATACCCGGTCCTTACAAAAAAGAATGGCGAGATACTTTACTTAG AAAATTGTTAGAAGCTCAAGCCAAAATTCGTGAAAATGCTCCAGAAAATATGCGAGGTATTACTCTAATTTCTTCAGAAG AACTTAGTGAAATTAGACGCATATGGTTAGAAGAAAAACACGAGTTTGATGATAGTTTACCTCGTATATATGAAGAAGTA ATAGGAGAAGAATTTCAAGACTGTCGTCCTGGTACAGGAATGAGTCTTTTAGGTAGTGATGAATGGTCAGTATTAGAAGA AATATGTAATCAGGATGAGATGCATCTTGAACTTATGGCAAAACTGTTAGACACAGAACGGCAATATTATATTAAGTCTC ACCGGTATAAGATTTATGAAAGTCTTGAACAATGTTTTGAAACAAGTTCTCGTTCTAAGGAAGAAGCTATTCAAAATGCT CATAATAAAAGAGACCTCAAAGAAGCTGTTGATAGAGGAAAAGTTTCAGAAAAAATCAAACAATTAAGTTGGGCAAATAT GAAGTTTTCTCGTCAAATTTCGGCAGATACTGAGTGA
Upstream 100 bases:
>100_bases AAAAAATCTAGAAGACAAACCTGACAATAGTATCCCTAGAACCTATTTAGATCATAATCATAGAAAATTAATTTGACTAA ATTCGAGAATATTTATAAAA
Downstream 100 bases:
>100_bases GAATAAGCAAGAATTTTATTGTTTAGTAAACCTCTATTTTTTTGGAATCAAGAGAAAAGGTAAAAATTACTCACATAGTG ACAATAAAATTATATTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Sulfurtransferase DndC; 3-Phosphoadenosine 5'-Phosphosulfate Sulfotransferase; Phosphoadenosine Phosphosulphate Reductase; Sulfurtransferase Dndc
Number of amino acids: Translated: 518; Mature: 518
Protein sequence:
>518_residues MKGTQQSLFPSRTTTQLVEDIKKLTTEIQELYCLDSIPWVIGYSGGKDSTATLQLIWNAIAELPQKKRIKTIHVITTDTL VENPIVSAWVTNSLQLMKESAKNQKLPIECHLLKPAVKQTYWVGLLGKGYPAPRHTFRWCTPRLKIDPSNLFIRNVVRNN GETIVVLGTRKAESANRLAIMNKREIGRLRNHLSPHPSLLNSLLYTPIEDWRTDEVWLYLMQWENPWENSNKDLLAMYRG ATEDNECPLVVDTSTPSCGSSRFGCWVCTLVDSDKSMSAMIQNDEEKEWLQPLINLRQELDISDRDKRDFRRIWGKVQLF ERNINGEVSVEPIPGPYKKEWRDTLLRKLLEAQAKIRENAPENMRGITLISSEELSEIRRIWLEEKHEFDDSLPRIYEEV IGEEFQDCRPGTGMSLLGSDEWSVLEEICNQDEMHLELMAKLLDTERQYYIKSHRYKIYESLEQCFETSSRSKEEAIQNA HNKRDLKEAVDRGKVSEKIKQLSWANMKFSRQISADTE
Sequences:
>Translated_518_residues MKGTQQSLFPSRTTTQLVEDIKKLTTEIQELYCLDSIPWVIGYSGGKDSTATLQLIWNAIAELPQKKRIKTIHVITTDTL VENPIVSAWVTNSLQLMKESAKNQKLPIECHLLKPAVKQTYWVGLLGKGYPAPRHTFRWCTPRLKIDPSNLFIRNVVRNN GETIVVLGTRKAESANRLAIMNKREIGRLRNHLSPHPSLLNSLLYTPIEDWRTDEVWLYLMQWENPWENSNKDLLAMYRG ATEDNECPLVVDTSTPSCGSSRFGCWVCTLVDSDKSMSAMIQNDEEKEWLQPLINLRQELDISDRDKRDFRRIWGKVQLF ERNINGEVSVEPIPGPYKKEWRDTLLRKLLEAQAKIRENAPENMRGITLISSEELSEIRRIWLEEKHEFDDSLPRIYEEV IGEEFQDCRPGTGMSLLGSDEWSVLEEICNQDEMHLELMAKLLDTERQYYIKSHRYKIYESLEQCFETSSRSKEEAIQNA HNKRDLKEAVDRGKVSEKIKQLSWANMKFSRQISADTE >Mature_518_residues MKGTQQSLFPSRTTTQLVEDIKKLTTEIQELYCLDSIPWVIGYSGGKDSTATLQLIWNAIAELPQKKRIKTIHVITTDTL VENPIVSAWVTNSLQLMKESAKNQKLPIECHLLKPAVKQTYWVGLLGKGYPAPRHTFRWCTPRLKIDPSNLFIRNVVRNN GETIVVLGTRKAESANRLAIMNKREIGRLRNHLSPHPSLLNSLLYTPIEDWRTDEVWLYLMQWENPWENSNKDLLAMYRG ATEDNECPLVVDTSTPSCGSSRFGCWVCTLVDSDKSMSAMIQNDEEKEWLQPLINLRQELDISDRDKRDFRRIWGKVQLF ERNINGEVSVEPIPGPYKKEWRDTLLRKLLEAQAKIRENAPENMRGITLISSEELSEIRRIWLEEKHEFDDSLPRIYEEV IGEEFQDCRPGTGMSLLGSDEWSVLEEICNQDEMHLELMAKLLDTERQYYIKSHRYKIYESLEQCFETSSRSKEEAIQNA HNKRDLKEAVDRGKVSEKIKQLSWANMKFSRQISADTE
Specific function: Unknown
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60148; Mature: 60148
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGTQQSLFPSRTTTQLVEDIKKLTTEIQELYCLDSIPWVIGYSGGKDSTATLQLIWNAI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHH AELPQKKRIKTIHVITTDTLVENPIVSAWVTNSLQLMKESAKNQKLPIECHLLKPAVKQT HHCCHHCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHH YWVGLLGKGYPAPRHTFRWCTPRLKIDPSNLFIRNVVRNNGETIVVLGTRKAESANRLAI HHEEECCCCCCCCCCCHHHCCCCEEECCHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEE MNKREIGRLRNHLSPHPSLLNSLLYTPIEDWRTDEVWLYLMQWENPWENSNKDLLAMYRG ECHHHHHHHHHCCCCCHHHHHHHHCCCHHHCCCCCEEEEEEECCCCCCCCCCCEEEEECC ATEDNECPLVVDTSTPSCGSSRFGCWVCTLVDSDKSMSAMIQNDEEKEWLQPLINLRQEL CCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHC DISDRDKRDFRRIWGKVQLFERNINGEVSVEPIPGPYKKEWRDTLLRKLLEAQAKIRENA CCCCCCHHHHHHHHHHHHHEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC PENMRGITLISSEELSEIRRIWLEEKHEFDDSLPRIYEEVIGEEFQDCRPGTGMSLLGSD CCCCCCEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEECCCC EWSVLEEICNQDEMHLELMAKLLDTERQYYIKSHRYKIYESLEQCFETSSRSKEEAIQNA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH HNKRDLKEAVDRGKVSEKIKQLSWANMKFSRQISADTE HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC >Mature Secondary Structure MKGTQQSLFPSRTTTQLVEDIKKLTTEIQELYCLDSIPWVIGYSGGKDSTATLQLIWNAI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHH AELPQKKRIKTIHVITTDTLVENPIVSAWVTNSLQLMKESAKNQKLPIECHLLKPAVKQT HHCCHHCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHH YWVGLLGKGYPAPRHTFRWCTPRLKIDPSNLFIRNVVRNNGETIVVLGTRKAESANRLAI HHEEECCCCCCCCCCCHHHCCCCEEECCHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEE MNKREIGRLRNHLSPHPSLLNSLLYTPIEDWRTDEVWLYLMQWENPWENSNKDLLAMYRG ECHHHHHHHHHCCCCCHHHHHHHHCCCHHHCCCCCEEEEEEECCCCCCCCCCCEEEEECC ATEDNECPLVVDTSTPSCGSSRFGCWVCTLVDSDKSMSAMIQNDEEKEWLQPLINLRQEL CCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHC DISDRDKRDFRRIWGKVQLFERNINGEVSVEPIPGPYKKEWRDTLLRKLLEAQAKIRENA CCCCCCHHHHHHHHHHHHHEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC PENMRGITLISSEELSEIRRIWLEEKHEFDDSLPRIYEEVIGEEFQDCRPGTGMSLLGSD CCCCCCEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEECCCC EWSVLEEICNQDEMHLELMAKLLDTERQYYIKSHRYKIYESLEQCFETSSRSKEEAIQNA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH HNKRDLKEAVDRGKVSEKIKQLSWANMKFSRQISADTE HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA