Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475575

Identifier: 113475575

GI number: 113475575

Start: 2956694

End: 2956987

Strand: Reverse

Name: 113475575

Synonym: Tery_1908

Alternate gene names: NA

Gene position: 2956987-2956694 (Counterclockwise)

Preceding gene: 113475576

Following gene: 113475572

Centisome position: 38.15

GC content: 37.41

Gene sequence:

>294_bases
ATGATCAATGCTTTATGGCTAAAAATTCTTAAAACAGCTTATCGAAAAGATCCAGTAGTCAGCTTTGTAGTGACAATGGG
AGCAGTTGATGCCGTCATTGGAGGTGTCGAATCAAGTTGGTCTTTATTTTTTCTAGGAATGGGAACTGTAGGAGTTGCCA
TTATATTACGCCTCTATCTGCTCAAGGGTTCTCATATTGAGCAATCTAGTGCTGTTCCAGAATATTATTTGCCTCCTAAT
TCGTCTCGTCCACAACTACCAATTCTAAATATAAATAAAAAACATCTTCCTTAG

Upstream 100 bases:

>100_bases
TTCCGCAAATGTCTTGTAGGATAAGCGTCGGGAGAGTGTCAATCTCCTTACGTCAAATAAATAAGTATACTGAAAATCTA
TTTTGTACTAAATTAAGCTT

Downstream 100 bases:

>100_bases
ATTAGAAAGAATTTATAGTCTAGAAAAATTACCCAAGTAGTTGCTATTAGTGACCTTTTAATTTACGAATATTCCCGCTC
TATTAAGTGCTCTATTATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MINALWLKILKTAYRKDPVVSFVVTMGAVDAVIGGVESSWSLFFLGMGTVGVAIILRLYLLKGSHIEQSSAVPEYYLPPN
SSRPQLPILNINKKHLP

Sequences:

>Translated_97_residues
MINALWLKILKTAYRKDPVVSFVVTMGAVDAVIGGVESSWSLFFLGMGTVGVAIILRLYLLKGSHIEQSSAVPEYYLPPN
SSRPQLPILNINKKHLP
>Mature_97_residues
MINALWLKILKTAYRKDPVVSFVVTMGAVDAVIGGVESSWSLFFLGMGTVGVAIILRLYLLKGSHIEQSSAVPEYYLPPN
SSRPQLPILNINKKHLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10681; Mature: 10681

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINALWLKILKTAYRKDPVVSFVVTMGAVDAVIGGVESSWSLFFLGMGTVGVAIILRLYL
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHH
LKGSHIEQSSAVPEYYLPPNSSRPQLPILNINKKHLP
HCCCCCCCCCCCCCEECCCCCCCCCCCEECCCCCCCC
>Mature Secondary Structure
MINALWLKILKTAYRKDPVVSFVVTMGAVDAVIGGVESSWSLFFLGMGTVGVAIILRLYL
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHH
LKGSHIEQSSAVPEYYLPPNSSRPQLPILNINKKHLP
HCCCCCCCCCCCCCEECCCCCCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA