| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is yeaC [H]
Identifier: 113475530
GI number: 113475530
Start: 2847592
End: 2848500
Strand: Reverse
Name: yeaC [H]
Synonym: Tery_1862
Alternate gene names: 113475530
Gene position: 2848500-2847592 (Counterclockwise)
Preceding gene: 113475531
Following gene: 113475527
Centisome position: 36.75
GC content: 39.6
Gene sequence:
>909_bases ATGATAGAAAGTATTGAAAAGCTAAAAGAAAATCTGAGTCAAGCTATTGTGGGCAAAGAAGATGGCATCAAGTTAGTATT AGTAGCTCTACTTTCAGGGGGTCATGTTCTTCTAGAAGATGTTCCCGGTGTAGGTAAAACCTTACTAGCAAAATCTTTAG CTTATTCGATCGCTGGAAAGTTTCAGCGAATTCAATGTACTCCTGACTTACTACCCACTGATATTACTGGTACTAATATT TGGAATCCTCGCAGTGGAGAATTTGAATTTCTACCCGGCCCGGTCTTTGCAAACGTCCTATTGACGGATGAAATTAATCG TGCAACACCTCGTACTCAGTCTGCTCTTTTGGAAGTAATGGAGGAAAAACAGGTTACCATAGATGGGGTGTCGCGTTCTG TTCCTAACCCATTTTTTGTAATTGCAACTCAGAACCCAATTGAGTATCAGGGAACATTTCCATTGCCAGAAGCACAAATG GATCGTTTTACTTTATCTCTAACATTAGGCTATCCTACAGAGTCGGAAGAGCTTCAGATGCTACAAAGAATTTCTGAAGG TTCAGGAGTTAAGACACTAAAAGCTTGCATTACTTTGGAGGAAGTACAGGAGTTACGTCGTTTATGCAGCTTAGTCAAAG TAGATGAGTCTTTGAAAAAGTATATTCTCAAACTGGTTAGAGCAACAAGGGAAGATGAAGAAATTACACTAGGTGTTAGT CCTCGTGGAACAGTTACTTTACATCAAGCAACTCAAGCTTTAGGTTTTCTATCCGGAAGAAATTATGCTATTCCTGATGA TGTCAAGTTTCTTGTTCCTTATGTACTTTCCCATCGTTTAATAACCGTAGGAGGAAGACAGACGAAAACAGTTGTGGAAA GGTTACTGGGTTCTATCACAGTTTCCTAG
Upstream 100 bases:
>100_bases GTTATTTCAGTTAAGATTGAAAGAAAGCTTTCTTACTCTGAAAAGGTTTTAGGTGAAAAAGTATTTTATTCTTATTTGAA ATGACTACATTAATAATTTT
Downstream 100 bases:
>100_bases TTGAAATTTTTGGGATATTGGGAGTAGGAGAGTAGGGAAAGTTGAAGTAATTATAGAATTATAAACTTATGATAACTAAG CTAGGCATATCAAATCATAG
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MIESIEKLKENLSQAIVGKEDGIKLVLVALLSGGHVLLEDVPGVGKTLLAKSLAYSIAGKFQRIQCTPDLLPTDITGTNI WNPRSGEFEFLPGPVFANVLLTDEINRATPRTQSALLEVMEEKQVTIDGVSRSVPNPFFVIATQNPIEYQGTFPLPEAQM DRFTLSLTLGYPTESEELQMLQRISEGSGVKTLKACITLEEVQELRRLCSLVKVDESLKKYILKLVRATREDEEITLGVS PRGTVTLHQATQALGFLSGRNYAIPDDVKFLVPYVLSHRLITVGGRQTKTVVERLLGSITVS
Sequences:
>Translated_302_residues MIESIEKLKENLSQAIVGKEDGIKLVLVALLSGGHVLLEDVPGVGKTLLAKSLAYSIAGKFQRIQCTPDLLPTDITGTNI WNPRSGEFEFLPGPVFANVLLTDEINRATPRTQSALLEVMEEKQVTIDGVSRSVPNPFFVIATQNPIEYQGTFPLPEAQM DRFTLSLTLGYPTESEELQMLQRISEGSGVKTLKACITLEEVQELRRLCSLVKVDESLKKYILKLVRATREDEEITLGVS PRGTVTLHQATQALGFLSGRNYAIPDDVKFLVPYVLSHRLITVGGRQTKTVVERLLGSITVS >Mature_302_residues MIESIEKLKENLSQAIVGKEDGIKLVLVALLSGGHVLLEDVPGVGKTLLAKSLAYSIAGKFQRIQCTPDLLPTDITGTNI WNPRSGEFEFLPGPVFANVLLTDEINRATPRTQSALLEVMEEKQVTIDGVSRSVPNPFFVIATQNPIEYQGTFPLPEAQM DRFTLSLTLGYPTESEELQMLQRISEGSGVKTLKACITLEEVQELRRLCSLVKVDESLKKYILKLVRATREDEEITLGVS PRGTVTLHQATQALGFLSGRNYAIPDDVKFLVPYVLSHRLITVGGRQTKTVVERLLGSITVS
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 33262; Mature: 33262
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIESIEKLKENLSQAIVGKEDGIKLVLVALLSGGHVLLEDVPGVGKTLLAKSLAYSIAGK CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCC FQRIQCTPDLLPTDITGTNIWNPRSGEFEFLPGPVFANVLLTDEINRATPRTQSALLEVM CEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHEEEECCCCCCCCHHHHHHHHHH EEKQVTIDGVSRSVPNPFFVIATQNPIEYQGTFPLPEAQMDRFTLSLTLGYPTESEELQM HHCCEEECCHHCCCCCCEEEEEECCCCEECCCCCCCCHHHCEEEEEEEECCCCCHHHHHH LQRISEGSGVKTLKACITLEEVQELRRLCSLVKVDESLKKYILKLVRATREDEEITLGVS HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC PRGTVTLHQATQALGFLSGRNYAIPDDVKFLVPYVLSHRLITVGGRQTKTVVERLLGSIT CCCCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCC VS CC >Mature Secondary Structure MIESIEKLKENLSQAIVGKEDGIKLVLVALLSGGHVLLEDVPGVGKTLLAKSLAYSIAGK CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCC FQRIQCTPDLLPTDITGTNIWNPRSGEFEFLPGPVFANVLLTDEINRATPRTQSALLEVM CEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHEEEECCCCCCCCHHHHHHHHHH EEKQVTIDGVSRSVPNPFFVIATQNPIEYQGTFPLPEAQMDRFTLSLTLGYPTESEELQM HHCCEEECCHHCCCCCCEEEEEECCCCEECCCCCCCCHHHCEEEEEEEECCCCCHHHHHH LQRISEGSGVKTLKACITLEEVQELRRLCSLVKVDESLKKYILKLVRATREDEEITLGVS HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC PRGTVTLHQATQALGFLSGRNYAIPDDVKFLVPYVLSHRLITVGGRQTKTVVERLLGSIT CCCCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHCC VS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]