Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475483

Identifier: 113475483

GI number: 113475483

Start: 2767705

End: 2769240

Strand: Reverse

Name: 113475483

Synonym: Tery_1814

Alternate gene names: NA

Gene position: 2769240-2767705 (Counterclockwise)

Preceding gene: 113475484

Following gene: 113475482

Centisome position: 35.73

GC content: 28.58

Gene sequence:

>1536_bases
ATGTTAAGCAGGGACCAGTTTGAACGCATTGAACAGGAAGAGTTAACTCCTATTCTCAAAAGAATTTTAAATAGAATATT
AGATGGTAAAACAAATGAGGAGATCAGAACAGATGAAACAGTTTGGTTCAATTTAAATGTATATGAATATCTCAATGTAT
ATAAGTATAATAACCCTAAAGATATAGTCGAACAGATCAATATAAAAATTGATAAAATAAAAGCTCAAAAAGACAAAAAT
GATAATCAAATTAAAAAGCTCAAAAAACTCAAATTAGAGGTGGAAGATTTATATTATTTCCGAAAATCTTCATCTGGTAA
AAGCAAAGCTTTACTTAGTAAGCATTTACGAGCTATATGTGATAAATTTAGGGTTAAAAGCACAAGAAATATAGAAGAAG
ATTTATTCATTGTCATGAAATATTTCGTTGAATATAAGCAATATAGGATTTCTTCTGCAGCTAGAGCCAGGTTTGAATTA
TTAGGGCGTATTCCCTACCCAGGAGGTTCTATTCCAACTTATTCTCCCTACTATCAATATCGATATTATAACCAAAATTG
TTATTTAGAAAATCAATGTTTGAGTAAGATTGAAAATGCAGGAAAGGAAGCTATATTAATTCGGATTAAAGGTCCTCATT
TGAGGGGTAAAACATCTTTCAAGAATAGGCTATTAAATAATAAATTAGTTACAAATAATAAGGCTAAAGTAGTTGATATT
GATTTAGCAGAACATTTTAGTTCTTTCCAAAAAGAAAAATTTGAAACTTATGATTGGTTTTGTCGTGAACTTTGTCAACA
GTTAGGTTTGAATGCAGAAGAGATACTTAAAGAATGGGGAAAAGCCATAGAAAGTGTTTATGATTGTACGTTCTTTGTTG
AAAAACACATATTGTCTGAGATTAATCAGCCTATTTTTTTGAGCTTTGATAATTTCCATAAAATATTTGAATATTCCAAT
TTTAATGAATTTGCGAGCATGTTACGATGTTGGCATGATAACAAAGCCAAAAATGATCATAAGTGGATAAATTTGGTATT
AATTTTAATTTATTCAACATCTAATTATCCCAAGTCAAATATTAATAGCTCTCCTTTATTTAATTTAGGAGAAGGTTGGA
ATTTAGGTGATTTTAGTTATCAAGAAATTAAGGAATTATCAGATAAGCATCAATTAGACTGGGGAGTTAAACAACTTGAA
AAGTTAATGTCTTTTATCGGAGGACATCCATATTTAGTAAGACTAACTTTGTATCATGTCGCAATTGAAGGAAAATCTTT
AGATAATATCTTAGCAAAAGCAACTACAAATGAGAGCATTTATAAAGATTATTTGATGCAACTTTACAACATTGTTAATG
ATGCTAAATTAACAGATGACTTAAGAAAAATAGTTAATAGTCAAGATTATGTTAAGTTAGATTCGCCAATGTCAAATTTT
CATTTACAGAATGCAGGTTTAATTATTCAGAATAATAACAAGGTTAAACCTCGTTGTCGTTTATATCGTGATTATTTTGT
TAGTATTTTGCAATAG

Upstream 100 bases:

>100_bases
GTTTATCATCTGCTCATTCCTAAACTTTTTTGATGCATCATACCAAACTAAACTTGGTATGAAATCTTATTTTCTGGTAA
ATATATGGAGAGAGTAAGTA

Downstream 100 bases:

>100_bases
AGGGCTTTGTTACAAAAAAAGACAAAAATAGTTAGGACTTAAACCACCTACGCCACCAGTTTCTAGGATAAAATAGGATT
AAGTTATATATATGTATAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MLSRDQFERIEQEELTPILKRILNRILDGKTNEEIRTDETVWFNLNVYEYLNVYKYNNPKDIVEQINIKIDKIKAQKDKN
DNQIKKLKKLKLEVEDLYYFRKSSSGKSKALLSKHLRAICDKFRVKSTRNIEEDLFIVMKYFVEYKQYRISSAARARFEL
LGRIPYPGGSIPTYSPYYQYRYYNQNCYLENQCLSKIENAGKEAILIRIKGPHLRGKTSFKNRLLNNKLVTNNKAKVVDI
DLAEHFSSFQKEKFETYDWFCRELCQQLGLNAEEILKEWGKAIESVYDCTFFVEKHILSEINQPIFLSFDNFHKIFEYSN
FNEFASMLRCWHDNKAKNDHKWINLVLILIYSTSNYPKSNINSSPLFNLGEGWNLGDFSYQEIKELSDKHQLDWGVKQLE
KLMSFIGGHPYLVRLTLYHVAIEGKSLDNILAKATTNESIYKDYLMQLYNIVNDAKLTDDLRKIVNSQDYVKLDSPMSNF
HLQNAGLIIQNNNKVKPRCRLYRDYFVSILQ

Sequences:

>Translated_511_residues
MLSRDQFERIEQEELTPILKRILNRILDGKTNEEIRTDETVWFNLNVYEYLNVYKYNNPKDIVEQINIKIDKIKAQKDKN
DNQIKKLKKLKLEVEDLYYFRKSSSGKSKALLSKHLRAICDKFRVKSTRNIEEDLFIVMKYFVEYKQYRISSAARARFEL
LGRIPYPGGSIPTYSPYYQYRYYNQNCYLENQCLSKIENAGKEAILIRIKGPHLRGKTSFKNRLLNNKLVTNNKAKVVDI
DLAEHFSSFQKEKFETYDWFCRELCQQLGLNAEEILKEWGKAIESVYDCTFFVEKHILSEINQPIFLSFDNFHKIFEYSN
FNEFASMLRCWHDNKAKNDHKWINLVLILIYSTSNYPKSNINSSPLFNLGEGWNLGDFSYQEIKELSDKHQLDWGVKQLE
KLMSFIGGHPYLVRLTLYHVAIEGKSLDNILAKATTNESIYKDYLMQLYNIVNDAKLTDDLRKIVNSQDYVKLDSPMSNF
HLQNAGLIIQNNNKVKPRCRLYRDYFVSILQ
>Mature_511_residues
MLSRDQFERIEQEELTPILKRILNRILDGKTNEEIRTDETVWFNLNVYEYLNVYKYNNPKDIVEQINIKIDKIKAQKDKN
DNQIKKLKKLKLEVEDLYYFRKSSSGKSKALLSKHLRAICDKFRVKSTRNIEEDLFIVMKYFVEYKQYRISSAARARFEL
LGRIPYPGGSIPTYSPYYQYRYYNQNCYLENQCLSKIENAGKEAILIRIKGPHLRGKTSFKNRLLNNKLVTNNKAKVVDI
DLAEHFSSFQKEKFETYDWFCRELCQQLGLNAEEILKEWGKAIESVYDCTFFVEKHILSEINQPIFLSFDNFHKIFEYSN
FNEFASMLRCWHDNKAKNDHKWINLVLILIYSTSNYPKSNINSSPLFNLGEGWNLGDFSYQEIKELSDKHQLDWGVKQLE
KLMSFIGGHPYLVRLTLYHVAIEGKSLDNILAKATTNESIYKDYLMQLYNIVNDAKLTDDLRKIVNSQDYVKLDSPMSNF
HLQNAGLIIQNNNKVKPRCRLYRDYFVSILQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60450; Mature: 60450

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRDQFERIEQEELTPILKRILNRILDGKTNEEIRTDETVWFNLNVYEYLNVYKYNNPK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCHH
DIVEQINIKIDKIKAQKDKNDNQIKKLKKLKLEVEDLYYFRKSSSGKSKALLSKHLRAIC
HHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
DKFRVKSTRNIEEDLFIVMKYFVEYKQYRISSAARARFELLGRIPYPGGSIPTYSPYYQY
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
RYYNQNCYLENQCLSKIENAGKEAILIRIKGPHLRGKTSFKNRLLNNKLVTNNKAKVVDI
EEECCCCEEHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHCCCEEECCCCEEEEE
DLAEHFSSFQKEKFETYDWFCRELCQQLGLNAEEILKEWGKAIESVYDCTFFVEKHILSE
EHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INQPIFLSFDNFHKIFEYSNFNEFASMLRCWHDNKAKNDHKWINLVLILIYSTSNYPKSN
CCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEECCCCCCCCC
INSSPLFNLGEGWNLGDFSYQEIKELSDKHQLDWGVKQLEKLMSFIGGHPYLVRLTLYHV
CCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHH
AIEGKSLDNILAKATTNESIYKDYLMQLYNIVNDAKLTDDLRKIVNSQDYVKLDSPMSNF
EECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEECCCHHHC
HLQNAGLIIQNNNKVKPRCRLYRDYFVSILQ
EECCCCEEEECCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLSRDQFERIEQEELTPILKRILNRILDGKTNEEIRTDETVWFNLNVYEYLNVYKYNNPK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHHHHHHCCCCHH
DIVEQINIKIDKIKAQKDKNDNQIKKLKKLKLEVEDLYYFRKSSSGKSKALLSKHLRAIC
HHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
DKFRVKSTRNIEEDLFIVMKYFVEYKQYRISSAARARFELLGRIPYPGGSIPTYSPYYQY
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
RYYNQNCYLENQCLSKIENAGKEAILIRIKGPHLRGKTSFKNRLLNNKLVTNNKAKVVDI
EEECCCCEEHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHCCCEEECCCCEEEEE
DLAEHFSSFQKEKFETYDWFCRELCQQLGLNAEEILKEWGKAIESVYDCTFFVEKHILSE
EHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INQPIFLSFDNFHKIFEYSNFNEFASMLRCWHDNKAKNDHKWINLVLILIYSTSNYPKSN
CCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHEEEEECCCCCCCCC
INSSPLFNLGEGWNLGDFSYQEIKELSDKHQLDWGVKQLEKLMSFIGGHPYLVRLTLYHV
CCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHH
AIEGKSLDNILAKATTNESIYKDYLMQLYNIVNDAKLTDDLRKIVNSQDYVKLDSPMSNF
EECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEECCCHHHC
HLQNAGLIIQNNNKVKPRCRLYRDYFVSILQ
EECCCCEEEECCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA