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The map label for this gene is 113475482

Identifier: 113475482

GI number: 113475482

Start: 2765564

End: 2766694

Strand: Reverse

Name: 113475482

Synonym: Tery_1813

Alternate gene names: NA

Gene position: 2766694-2765564 (Counterclockwise)

Preceding gene: 113475483

Following gene: 113475479

Centisome position: 35.7

GC content: 27.14

Gene sequence:

>1131_bases
ATGACAGAAAATTTCTATCACATTGGTGGAACTATTCCTTTTAACAAGCGAGAGGTTTATATATCTAGAAAAGCTGATGA
AGATTTACTAAAATCATTAAAAAATGGTCGATTTTCTTATGTATTTAACTCTAGACAAATGGGAAAAAGTTCTCTAATAG
TTAATATTAAAGAAAAATTGAAAGAAAACAAAGATATTTTATGTATTGACTATAGTCTTCAAGAGCAACCTAAAGATGAA
TCAAATTTTTATAAAGCTCTTATGAGAAAGATAGGTCATAAATGTTTAGAGACTAACATAGACAAAACTCTTGATATTAG
AAATTATATAGCTATTGCTCAAAACAGAGAAATTGGATGTAATGATTTAACAGAATTTTTCAAAAAAGTTTTGTCATCTA
ATAAAAGAATAAAAATTATAATTTTTGTTGATGAAATTGATGAGTTGTTTAAGTTCACTTGGAGAGATAACTTTTTTGAC
TTAATTCGAGGCTATTCTGAATACAAAATTTATTCTAATAGACAAGAAGACAGAAGGCTTACTTTTTGTTTATTAGGAGT
TGCTACACCATCTGATTTAATTAAAAATTATGGTAATAGTCTTTTTAGTATTCAGTGTAAAACTATTAAATTAGAAGGTT
TTAAAAGTCATGAATGTTCTAATTTAGCAGCAGGATTAAAAAATGTTGCTTTTGAACCAGAGTTAGTTATACAATGGATT
CTTGATTGGACTAGTGGACAGCCTTTTTTAACACAAAAAGTATGTGAGTTAGTGGCAAAATCTGGTTTGAATTTTTCTCT
AGAAAAAAGAGAAAAAATAAAACTTGATAATTTAGTACAAGAAAAAATAATTGAAAATGGATTAAGTGAAGAAAAAGACG
ATCCTGAACATTTAAGAACTATTAGAAACCGTCTGAGAGAAGAACAGCAAGTACACCTTTTATTAAATTTATATGAAAGG
ATATTAAATGAAGGCAGTATTGAGTCAAAAGATGATTATGTTTACCAAAAATTGACATTGTCAGGATTAGTTGTGAAAAA
AGATGGGCGCTTAGAAGTATTTAATAAGATCTATAAAAGGATATTTAATCAAGATTGGATAAAAGAAGAACTTAATAACC
TCAAGGGCTGA

Upstream 100 bases:

>100_bases
ACATAAACATAATCACATTAAACTTAGAGTTTAACTACTCAAAAATTACCTTGACTATTTTTCTCTAGCTTTTAAATTCC
AACTAAGCCGAACATAAATA

Downstream 100 bases:

>100_bases
AAAGCAGACTAAAAAATTGATATAGTAATGTTTATCTCTAGTTGTCTTAATTATTATTCAAATATAACTAGGATTTCCTG
AATAAATCTGACAATAATTG

Product: WD repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MTENFYHIGGTIPFNKREVYISRKADEDLLKSLKNGRFSYVFNSRQMGKSSLIVNIKEKLKENKDILCIDYSLQEQPKDE
SNFYKALMRKIGHKCLETNIDKTLDIRNYIAIAQNREIGCNDLTEFFKKVLSSNKRIKIIIFVDEIDELFKFTWRDNFFD
LIRGYSEYKIYSNRQEDRRLTFCLLGVATPSDLIKNYGNSLFSIQCKTIKLEGFKSHECSNLAAGLKNVAFEPELVIQWI
LDWTSGQPFLTQKVCELVAKSGLNFSLEKREKIKLDNLVQEKIIENGLSEEKDDPEHLRTIRNRLREEQQVHLLLNLYER
ILNEGSIESKDDYVYQKLTLSGLVVKKDGRLEVFNKIYKRIFNQDWIKEELNNLKG

Sequences:

>Translated_376_residues
MTENFYHIGGTIPFNKREVYISRKADEDLLKSLKNGRFSYVFNSRQMGKSSLIVNIKEKLKENKDILCIDYSLQEQPKDE
SNFYKALMRKIGHKCLETNIDKTLDIRNYIAIAQNREIGCNDLTEFFKKVLSSNKRIKIIIFVDEIDELFKFTWRDNFFD
LIRGYSEYKIYSNRQEDRRLTFCLLGVATPSDLIKNYGNSLFSIQCKTIKLEGFKSHECSNLAAGLKNVAFEPELVIQWI
LDWTSGQPFLTQKVCELVAKSGLNFSLEKREKIKLDNLVQEKIIENGLSEEKDDPEHLRTIRNRLREEQQVHLLLNLYER
ILNEGSIESKDDYVYQKLTLSGLVVKKDGRLEVFNKIYKRIFNQDWIKEELNNLKG
>Mature_375_residues
TENFYHIGGTIPFNKREVYISRKADEDLLKSLKNGRFSYVFNSRQMGKSSLIVNIKEKLKENKDILCIDYSLQEQPKDES
NFYKALMRKIGHKCLETNIDKTLDIRNYIAIAQNREIGCNDLTEFFKKVLSSNKRIKIIIFVDEIDELFKFTWRDNFFDL
IRGYSEYKIYSNRQEDRRLTFCLLGVATPSDLIKNYGNSLFSIQCKTIKLEGFKSHECSNLAAGLKNVAFEPELVIQWIL
DWTSGQPFLTQKVCELVAKSGLNFSLEKREKIKLDNLVQEKIIENGLSEEKDDPEHLRTIRNRLREEQQVHLLLNLYERI
LNEGSIESKDDYVYQKLTLSGLVVKKDGRLEVFNKIYKRIFNQDWIKEELNNLKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 11 WD repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020472
- InterPro:   IPR015943
- InterPro:   IPR001680
- InterPro:   IPR011046
- InterPro:   IPR019782
- InterPro:   IPR019775
- InterPro:   IPR017986
- InterPro:   IPR019781 [H]

Pfam domain/function: PF00400 WD40 [H]

EC number: NA

Molecular weight: Translated: 44176; Mature: 44045

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTENFYHIGGTIPFNKREVYISRKADEDLLKSLKNGRFSYVFNSRQMGKSSLIVNIKEKL
CCCCEEECCCCCCCCCCEEEEECCCCHHHHHHHHCCCEEEEECCHHCCCHHHEEEEHHHH
KENKDILCIDYSLQEQPKDESNFYKALMRKIGHKCLETNIDKTLDIRNYIAIAQNREIGC
CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEECCCCCCH
NDLTEFFKKVLSSNKRIKIIIFVDEIDELFKFTWRDNFFDLIRGYSEYKIYSNRQEDRRL
HHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHCCCHHHHHCCCHHHEEECCCCCCCEE
TFCLLGVATPSDLIKNYGNSLFSIQCKTIKLEGFKSHECSNLAAGLKNVAFEPELVIQWI
EEEEEECCCHHHHHHHCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHH
LDWTSGQPFLTQKVCELVAKSGLNFSLEKREKIKLDNLVQEKIIENGLSEEKDDPEHLRT
HHHCCCCCHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
IRNRLREEQQVHLLLNLYERILNEGSIESKDDYVYQKLTLSGLVVKKDGRLEVFNKIYKR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEECCEEEEECCCCHHHHHHHHHH
IFNQDWIKEELNNLKG
HHCHHHHHHHHHHCCC
>Mature Secondary Structure 
TENFYHIGGTIPFNKREVYISRKADEDLLKSLKNGRFSYVFNSRQMGKSSLIVNIKEKL
CCCEEECCCCCCCCCCEEEEECCCCHHHHHHHHCCCEEEEECCHHCCCHHHEEEEHHHH
KENKDILCIDYSLQEQPKDESNFYKALMRKIGHKCLETNIDKTLDIRNYIAIAQNREIGC
CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEEECCCCCCH
NDLTEFFKKVLSSNKRIKIIIFVDEIDELFKFTWRDNFFDLIRGYSEYKIYSNRQEDRRL
HHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHCCCHHHHHCCCHHHEEECCCCCCCEE
TFCLLGVATPSDLIKNYGNSLFSIQCKTIKLEGFKSHECSNLAAGLKNVAFEPELVIQWI
EEEEEECCCHHHHHHHCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHH
LDWTSGQPFLTQKVCELVAKSGLNFSLEKREKIKLDNLVQEKIIENGLSEEKDDPEHLRT
HHHCCCCCHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
IRNRLREEQQVHLLLNLYERILNEGSIESKDDYVYQKLTLSGLVVKKDGRLEVFNKIYKR
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHEECCEEEEECCCCHHHHHHHHHH
IFNQDWIKEELNNLKG
HHCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]