| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475460
Identifier: 113475460
GI number: 113475460
Start: 2733181
End: 2733381
Strand: Reverse
Name: 113475460
Synonym: Tery_1789
Alternate gene names: NA
Gene position: 2733381-2733181 (Counterclockwise)
Preceding gene: 113475461
Following gene: 113475459
Centisome position: 35.27
GC content: 38.81
Gene sequence:
>201_bases TTGGGCATCGCTGTTAGTAGTGAAACAGCTCGTTCTGAAGGTATTATTAATCCCGTCTTAGTTGAAGCCAAAAAAGAAGA TATCAAACCATGTCTTGGACAATGTTTAGCAGAAATGGTAGCAGCTCAACGCTTTAATGAACAAAAACGGCTATTAATTT CAACTATCTACGGTGCAGTTACAAGTGGTACAGTTTGGTGA
Upstream 100 bases:
>100_bases ATTTTCAACTGACTATGGTTACAGGCGATCGCTTTCTCCCAGACATTTACCCAATTCATCCTACTGCTTTACTTAAAGAT ACCCTAAAATAAACAGTACC
Downstream 100 bases:
>100_bases TTTCTTAAACTAGAAGAGCAAACTGTAACAATTTATTTGACAGATTATCCATTGCCACCTGTTGAGAATATTTTGAGCTT TCTAGTTTGGATGGCAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 66; Mature: 65
Protein sequence:
>66_residues MGIAVSSETARSEGIINPVLVEAKKEDIKPCLGQCLAEMVAAQRFNEQKRLLISTIYGAVTSGTVW
Sequences:
>Translated_66_residues MGIAVSSETARSEGIINPVLVEAKKEDIKPCLGQCLAEMVAAQRFNEQKRLLISTIYGAVTSGTVW >Mature_65_residues GIAVSSETARSEGIINPVLVEAKKEDIKPCLGQCLAEMVAAQRFNEQKRLLISTIYGAVTSGTVW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7123; Mature: 6992
Theoretical pI: Translated: 6.48; Mature: 6.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIAVSSETARSEGIINPVLVEAKKEDIKPCLGQCLAEMVAAQRFNEQKRLLISTIYGAV CCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH TSGTVW CCCCCC >Mature Secondary Structure GIAVSSETARSEGIINPVLVEAKKEDIKPCLGQCLAEMVAAQRFNEQKRLLISTIYGAV CCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH TSGTVW CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA