| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474708
Identifier: 113474708
GI number: 113474708
Start: 1419001
End: 1419309
Strand: Reverse
Name: 113474708
Synonym: Tery_0895
Alternate gene names: NA
Gene position: 1419309-1419001 (Counterclockwise)
Preceding gene: 113474709
Following gene: 113474696
Centisome position: 18.31
GC content: 27.83
Gene sequence:
>309_bases ATGACTAAATATAACGAAATTGAGAAGGGGCTAAATAAAGTTAAAGATGAGCTCAAGAAAGTTGATTTTAAAAAAATTGA TAATGAGCTGCATAAAGTTCAGAATGAGCTCAAGAAAGTTGATTTTAAAGCAATTAATAATGAGTGGAATAAAGCTAAGG GTAACTTCAACAAAGCTGACTTGAAAACAATTAATAATGAGTGGAATAAAGTTAAGAATAACTTCAACAAAGCTGATTTT AAAACAATGACTAAGAAAATATCAAGTGAGCTTCAAAAGGTAAGTAAGAAAATCAATAAAAAGCCATAA
Upstream 100 bases:
>100_bases CCCGACGCTGCTATACCCTAGAAAGGGATAGACTCCCTAGCATCGCTGTAATGCTAAAATCAAAATTAGAACAATTTGTT ATTTTATTTGGAGAAAAAAA
Downstream 100 bases:
>100_bases AAAGCAGAAGGGATAAACTTTAAAAGAGCCAATTTGGATTTAAACTCCCAAATTTTAAGTCAAATTTTAAGTCAAAAGTC TTTTAAAAGTCATTAATATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MTKYNEIEKGLNKVKDELKKVDFKKIDNELHKVQNELKKVDFKAINNEWNKAKGNFNKADLKTINNEWNKVKNNFNKADF KTMTKKISSELQKVSKKINKKP
Sequences:
>Translated_102_residues MTKYNEIEKGLNKVKDELKKVDFKKIDNELHKVQNELKKVDFKAINNEWNKAKGNFNKADLKTINNEWNKVKNNFNKADF KTMTKKISSELQKVSKKINKKP >Mature_101_residues TKYNEIEKGLNKVKDELKKVDFKKIDNELHKVQNELKKVDFKAINNEWNKAKGNFNKADLKTINNEWNKVKNNFNKADFK TMTKKISSELQKVSKKINKKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12069; Mature: 11938
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKYNEIEKGLNKVKDELKKVDFKKIDNELHKVQNELKKVDFKAINNEWNKAKGNFNKAD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCHHH LKTINNEWNKVKNNFNKADFKTMTKKISSELQKVSKKINKKP HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TKYNEIEKGLNKVKDELKKVDFKKIDNELHKVQNELKKVDFKAINNEWNKAKGNFNKAD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCHHH LKTINNEWNKVKNNFNKADFKTMTKKISSELQKVSKKINKKP HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA