| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is argG
Identifier: 113474696
GI number: 113474696
Start: 1401369
End: 1402571
Strand: Reverse
Name: argG
Synonym: Tery_0882
Alternate gene names: 113474696
Gene position: 1402571-1401369 (Counterclockwise)
Preceding gene: 113474708
Following gene: 113474694
Centisome position: 18.1
GC content: 42.23
Gene sequence:
>1203_bases ATGAGTCGTGCTACTAAAGTTGTGCTAGCTTATTCTGGAGGAGTAGATACTTCTGTTTGTATCCCTTATCTGAAAAATGA ATGGGGAGTAAAAGAAGTAATTACCCTAGCAGCAGATTTAGGTCAAGGAGATGAATTAGAAGGAGTTCGGAAAAAAGCAT TAGATTCTGGGGCAGTAGAATCTCTAGTCATAGATGTTATTGAACCTCTAATTAAAGAATATGCTTTTCCTGCTATTCAA GCAAATGCTCTATATGAAAATCGCTACCCTCTAGCAACAGCATTAGCTCGACCTCTAATTGCCAAAATATTAGTAGAGGC AGCAGAAAAATATGGTGCTGATGCTATTGCCCACGGTTGTACAGGAAAAGGTAATGACCAGGTAAGGTTTGATGTTGCTA TTGCCGCACTAAATCCTCAAATTAAGATTCTTGCACCTGCGCGGGAGTGGGGAATGAGTCGGGAGGAGACTATTGCTTAT GGTGAAGAGTATGGCATTCCGGCTCCTGTGAAAAAATCTTCCCCTTATAGTATAGATAAGAATTTATTGGGGATGGCGAT CGAAGCTGGTGAGTTGGAAGATCCTTGGGTGGAGCCCCCAGAAGAAGTTTATGGGATGACTAAGGCGATCGCTGACACTC CCAACGAACCAGAATATATAGAGATTGGTTTTGAGCGGGGTATTCCTGTTAGTCTTAATGGTCAAGAAATGGGTGGTATT GAGTTGATAACTAAACTTAATCAGATAGCAGGAAACCATGGCATTGGTCGAATTGACATGATTGAAAACCGTCTGGTGGG GATTAAGTCGAGAGAAATTTATGAGTCTCCGGCAATGTGGGTGTTAATTCAAGGACACCGAGATTTAGAGAGTTTGACTT TAACTGCTGATGTAACTCGTTATAAGCGGGGTATTGAGGAGACTTATAGTCAGTTGGTTTATAACGGTTTGTGGTTTAGT CCGTTGAAGGGTGCATTGGATGCTTTTATTCAGCAGACCCAGGAAAGGGTGACTGGTGTTGTGCGGGTCAAGTTGTTTAA GGGTAATGCAATGGTTGTTGGTCGTAAGTCTGATAATTCTTTGTATAGTTTTGACTTAGCGACTTATGGTGCGGAGGATG AGTTTGACCATAAAGCGGCGGAAGGATTTATTTATGTTTGGGGTTTGCCGACTCGTGTTTGGTCAGAGAAACTCCGGGGT TAA
Upstream 100 bases:
>100_bases GGTTTTTATTGGCATAAAAAAAGTTTATACTTTAATTAACAATAAAGCTACAGATTTAGTTTAATAATAATAACTCAGTT GTTAATTTTTGAATAAAAAT
Downstream 100 bases:
>100_bases TAGCTGGGTGATTTTTTAAGTTTGATTAGTTGTTCCTGTAGGGATGAAATATTAGTCTCTACAGGAATAAGTATAATTAC TAATTTATTGGCATCTTCTA
Product: argininosuccinate synthase
Products: NA
Alternate protein names: Citrulline--aspartate ligase
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MSRATKVVLAYSGGVDTSVCIPYLKNEWGVKEVITLAADLGQGDELEGVRKKALDSGAVESLVIDVIEPLIKEYAFPAIQ ANALYENRYPLATALARPLIAKILVEAAEKYGADAIAHGCTGKGNDQVRFDVAIAALNPQIKILAPAREWGMSREETIAY GEEYGIPAPVKKSSPYSIDKNLLGMAIEAGELEDPWVEPPEEVYGMTKAIADTPNEPEYIEIGFERGIPVSLNGQEMGGI ELITKLNQIAGNHGIGRIDMIENRLVGIKSREIYESPAMWVLIQGHRDLESLTLTADVTRYKRGIEETYSQLVYNGLWFS PLKGALDAFIQQTQERVTGVVRVKLFKGNAMVVGRKSDNSLYSFDLATYGAEDEFDHKAAEGFIYVWGLPTRVWSEKLRG
Sequences:
>Translated_400_residues MSRATKVVLAYSGGVDTSVCIPYLKNEWGVKEVITLAADLGQGDELEGVRKKALDSGAVESLVIDVIEPLIKEYAFPAIQ ANALYENRYPLATALARPLIAKILVEAAEKYGADAIAHGCTGKGNDQVRFDVAIAALNPQIKILAPAREWGMSREETIAY GEEYGIPAPVKKSSPYSIDKNLLGMAIEAGELEDPWVEPPEEVYGMTKAIADTPNEPEYIEIGFERGIPVSLNGQEMGGI ELITKLNQIAGNHGIGRIDMIENRLVGIKSREIYESPAMWVLIQGHRDLESLTLTADVTRYKRGIEETYSQLVYNGLWFS PLKGALDAFIQQTQERVTGVVRVKLFKGNAMVVGRKSDNSLYSFDLATYGAEDEFDHKAAEGFIYVWGLPTRVWSEKLRG >Mature_399_residues SRATKVVLAYSGGVDTSVCIPYLKNEWGVKEVITLAADLGQGDELEGVRKKALDSGAVESLVIDVIEPLIKEYAFPAIQA NALYENRYPLATALARPLIAKILVEAAEKYGADAIAHGCTGKGNDQVRFDVAIAALNPQIKILAPAREWGMSREETIAYG EEYGIPAPVKKSSPYSIDKNLLGMAIEAGELEDPWVEPPEEVYGMTKAIADTPNEPEYIEIGFERGIPVSLNGQEMGGIE LITKLNQIAGNHGIGRIDMIENRLVGIKSREIYESPAMWVLIQGHRDLESLTLTADVTRYKRGIEETYSQLVYNGLWFSP LKGALDAFIQQTQERVTGVVRVKLFKGNAMVVGRKSDNSLYSFDLATYGAEDEFDHKAAEGFIYVWGLPTRVWSEKLRG
Specific function: Arginine biosynthesis; seventh step. [C]
COG id: COG0137
COG function: function code E; Argininosuccinate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the argininosuccinate synthase family. Type 1 subfamily
Homologues:
Organism=Homo sapiens, GI53759107, Length=402, Percent_Identity=42.2885572139304, Blast_Score=310, Evalue=2e-84, Organism=Homo sapiens, GI16950633, Length=402, Percent_Identity=42.2885572139304, Blast_Score=310, Evalue=2e-84, Organism=Escherichia coli, GI1789563, Length=359, Percent_Identity=29.2479108635098, Blast_Score=132, Evalue=4e-32, Organism=Saccharomyces cerevisiae, GI6324514, Length=412, Percent_Identity=36.1650485436893, Blast_Score=273, Evalue=3e-74, Organism=Drosophila melanogaster, GI21358151, Length=400, Percent_Identity=39.25, Blast_Score=283, Evalue=2e-76,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): ASSY_TRIEI (Q117P0)
Other databases:
- EMBL: CP000393 - RefSeq: YP_720757.1 - ProteinModelPortal: Q117P0 - SMR: Q117P0 - STRING: Q117P0 - GeneID: 4245545 - GenomeReviews: CP000393_GR - KEGG: ter:Tery_0882 - NMPDR: fig|203124.1.peg.3805 - eggNOG: COG0137 - HOGENOM: HBG335267 - OMA: KRVILAY - PhylomeDB: Q117P0 - ProtClustDB: PRK00509 - BioCyc: TERY203124:TERY_0882-MONOMER - GO: GO:0005737 - HAMAP: MF_00005 - InterPro: IPR001518 - InterPro: IPR018223 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR11587 - TIGRFAMs: TIGR00032
Pfam domain/function: PF00764 Arginosuc_synth
EC number: =6.3.4.5
Molecular weight: Translated: 44033; Mature: 43902
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS00564 ARGININOSUCCIN_SYN_1; PS00565 ARGININOSUCCIN_SYN_2
Important sites: BINDING 38-38 BINDING 89-89 BINDING 119-119 BINDING 121-121 BINDING 125-125 BINDING 125-125 BINDING 126-126 BINDING 129-129 BINDING 177-177 BINDING 262-262 BINDING 274-274
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRATKVVLAYSGGVDTSVCIPYLKNEWGVKEVITLAADLGQGDELEGVRKKALDSGAVE CCCCEEEEEEECCCCCCCEEHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHH SLVIDVIEPLIKEYAFPAIQANALYENRYPLATALARPLIAKILVEAAEKYGADAIAHGC HHHHHHHHHHHHHHCCCCCEECCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC TGKGNDQVRFDVAIAALNPQIKILAPAREWGMSREETIAYGEEYGIPAPVKKSSPYSIDK CCCCCCEEEEEEEEEEECCCEEEEECHHHHCCCHHHHHHCCHHCCCCCCCCCCCCCCCCC NLLGMAIEAGELEDPWVEPPEEVYGMTKAIADTPNEPEYIEIGFERGIPVSLNGQEMGGI HHHHEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCCCCCHH ELITKLNQIAGNHGIGRIDMIENRLVGIKSREIYESPAMWVLIQGHRDLESLTLTADVTR HHHHHHHHHHCCCCCCCCEEHHCHHCCCCCHHHHCCCCEEEEEECCCCCCCEEEEHHHHH YKRGIEETYSQLVYNGLWFSPLKGALDAFIQQTQERVTGVVRVKLFKGNAMVVGRKSDNS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCEEEEEECCCCC LYSFDLATYGAEDEFDHKAAEGFIYVWGLPTRVWSEKLRG EEEEEEEECCCCCCCCHHHHCCEEEEECCCHHHHHHHHCC >Mature Secondary Structure SRATKVVLAYSGGVDTSVCIPYLKNEWGVKEVITLAADLGQGDELEGVRKKALDSGAVE CCCEEEEEEECCCCCCCEEHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHH SLVIDVIEPLIKEYAFPAIQANALYENRYPLATALARPLIAKILVEAAEKYGADAIAHGC HHHHHHHHHHHHHHCCCCCEECCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC TGKGNDQVRFDVAIAALNPQIKILAPAREWGMSREETIAYGEEYGIPAPVKKSSPYSIDK CCCCCCEEEEEEEEEEECCCEEEEECHHHHCCCHHHHHHCCHHCCCCCCCCCCCCCCCCC NLLGMAIEAGELEDPWVEPPEEVYGMTKAIADTPNEPEYIEIGFERGIPVSLNGQEMGGI HHHHEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCCCCCHH ELITKLNQIAGNHGIGRIDMIENRLVGIKSREIYESPAMWVLIQGHRDLESLTLTADVTR HHHHHHHHHHCCCCCCCCEEHHCHHCCCCCHHHHCCCCEEEEEECCCCCCCEEEEHHHHH YKRGIEETYSQLVYNGLWFSPLKGALDAFIQQTQERVTGVVRVKLFKGNAMVVGRKSDNS HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCEEEEEECCCCC LYSFDLATYGAEDEFDHKAAEGFIYVWGLPTRVWSEKLRG EEEEEEEECCCCCCCCHHHHCCEEEEECCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA