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The map label for this gene is rbsK [H]

Identifier: 113474683

GI number: 113474683

Start: 1369252

End: 1370169

Strand: Reverse

Name: rbsK [H]

Synonym: Tery_0865

Alternate gene names: 113474683

Gene position: 1370169-1369252 (Counterclockwise)

Preceding gene: 113474688

Following gene: 113474681

Centisome position: 17.68

GC content: 39.43

Gene sequence:

>918_bases
ATGAGCATAATTATTTTTGGTAGTGTCAACATTGACTTAATTGCAACTACTCCCCGTTTACCGACTCCAGGAGAAACTAT
TAATGGCAACAACTTTTTTACCGCAGGTGGCGGTAAAGGAGCAAATCAAGCTGTTGCTGCTGCTGGCCTTGGCATTCCCA
CAAAAATAGTGGGGCGAGTCGGAAATGATAGCTTTGGGCAACAACTTCTAGTCAGTTTGTCCACTGCTAATGTTGATACA
ACAGATGTGTTAGTTGATGAGAATACTCATACGGGGGTGGCAGTTATTGCTGTGGGTGCTAGTGGAGAAAATAATATTAT
TGTTGTTCCTGGTGCTAACCATAGTATTAATAATACAGATGTAGAACGCCTAAAAAATTTGCTATCGGATGTTACAGCTT
TACTTTTACAATTAGAAATTCCCGTGGAAGTTGCTATAAGTGCAGCAAAAGTAGCTCAAGAAATGGGGGTTAAAGTTATT
CTAGATCCAGCACCAATGCCAGCAAATTTTCCTAATGATTTTTATAATTTGATTGACATTATTACTCCTAATGAAATTGA
GGCAAGTCAACTGGTTGGGTTTGAAGTAAATAATCAAGAAACTGCTATGGAGGCAGCTGTTGAATTATGTCACCGTGGTG
TAAAAAATGCTGTGGTGAAAATAGGCGATCGCGGAGTTATTTGTGCAACTAAAGAAGAAGCATTTTTTCAACCTGCCTTT
GTAGTAAAAACGATCGATACTGTCGCTGCGGGCGATGCTTTTAATGGTGGTTTAGCAGCAGCATTAGATACAGGTTTATC
ATTAAAAGAAGCTGTTAAATGGGGGGCTGCTGCTGGTGCTTTATGTACTACAAAACCAGGCGCTCAACCTGCAATGCCCG
ATAGAAAAACATTTGATAATTTTCTTTTAAAAAGGTAG

Upstream 100 bases:

>100_bases
CTATATATGGTGTTTTTGGGTAACTCTTGATAACTACAATAGACCACTATTACAATATACTACCAGCAGTAAGTAATTCT
TTTCAAAGCACTAATAACTT

Downstream 100 bases:

>100_bases
TAGGTTTTAGGTTTTAGATAGTAAATTTGGGAGCATTTCACATGGCGAATAGGAGAGCATGCTTTTGCTCCCCTACAAAG
AGATATTCTCAAAAAATAAG

Product: ribokinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSIIIFGSVNIDLIATTPRLPTPGETINGNNFFTAGGGKGANQAVAAAGLGIPTKIVGRVGNDSFGQQLLVSLSTANVDT
TDVLVDENTHTGVAVIAVGASGENNIIVVPGANHSINNTDVERLKNLLSDVTALLLQLEIPVEVAISAAKVAQEMGVKVI
LDPAPMPANFPNDFYNLIDIITPNEIEASQLVGFEVNNQETAMEAAVELCHRGVKNAVVKIGDRGVICATKEEAFFQPAF
VVKTIDTVAAGDAFNGGLAAALDTGLSLKEAVKWGAAAGALCTTKPGAQPAMPDRKTFDNFLLKR

Sequences:

>Translated_305_residues
MSIIIFGSVNIDLIATTPRLPTPGETINGNNFFTAGGGKGANQAVAAAGLGIPTKIVGRVGNDSFGQQLLVSLSTANVDT
TDVLVDENTHTGVAVIAVGASGENNIIVVPGANHSINNTDVERLKNLLSDVTALLLQLEIPVEVAISAAKVAQEMGVKVI
LDPAPMPANFPNDFYNLIDIITPNEIEASQLVGFEVNNQETAMEAAVELCHRGVKNAVVKIGDRGVICATKEEAFFQPAF
VVKTIDTVAAGDAFNGGLAAALDTGLSLKEAVKWGAAAGALCTTKPGAQPAMPDRKTFDNFLLKR
>Mature_304_residues
SIIIFGSVNIDLIATTPRLPTPGETINGNNFFTAGGGKGANQAVAAAGLGIPTKIVGRVGNDSFGQQLLVSLSTANVDTT
DVLVDENTHTGVAVIAVGASGENNIIVVPGANHSINNTDVERLKNLLSDVTALLLQLEIPVEVAISAAKVAQEMGVKVIL
DPAPMPANFPNDFYNLIDIITPNEIEASQLVGFEVNNQETAMEAAVELCHRGVKNAVVKIGDRGVICATKEEAFFQPAFV
VKTIDTVAAGDAFNGGLAAALDTGLSLKEAVKWGAAAGALCTTKPGAQPAMPDRKTFDNFLLKR

Specific function: Ribose metabolism; first step. [C]

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Homo sapiens, GI11545855, Length=294, Percent_Identity=37.4149659863946, Blast_Score=176, Evalue=3e-44,
Organism=Escherichia coli, GI1790193, Length=304, Percent_Identity=41.7763157894737, Blast_Score=216, Evalue=2e-57,
Organism=Escherichia coli, GI87082343, Length=297, Percent_Identity=29.6296296296296, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI87081971, Length=277, Percent_Identity=27.4368231046931, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1788017, Length=288, Percent_Identity=28.125, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788491, Length=298, Percent_Identity=26.1744966442953, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17532905, Length=306, Percent_Identity=36.6013071895425, Blast_Score=165, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6319884, Length=331, Percent_Identity=33.8368580060423, Blast_Score=150, Evalue=3e-37,
Organism=Drosophila melanogaster, GI20128807, Length=303, Percent_Identity=35.3135313531353, Blast_Score=152, Evalue=2e-37,
Organism=Drosophila melanogaster, GI24583886, Length=304, Percent_Identity=34.2105263157895, Blast_Score=144, Evalue=7e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR011877
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.15 [H]

Molecular weight: Translated: 31702; Mature: 31570

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIIIFGSVNIDLIATTPRLPTPGETINGNNFFTAGGGKGANQAVAAAGLGIPTKIVGRV
CEEEEEECCCEEEEEECCCCCCCCCEECCCEEEECCCCCCCCHHHHHHCCCCCHHHHHCC
GNDSFGQQLLVSLSTANVDTTDVLVDENTHTGVAVIAVGASGENNIIVVPGANHSINNTD
CCCHHHHHEEEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCCEEEEECCCCCCCCHH
VERLKNLLSDVTALLLQLEIPVEVAISAAKVAQEMGVKVILDPAPMPANFPNDFYNLIDI
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHC
ITPNEIEASQLVGFEVNNQETAMEAAVELCHRGVKNAVVKIGDRGVICATKEEAFFQPAF
CCCCCCCHHHEEEEEECCHHHHHHHHHHHHHHCHHHHHEEECCCCEEEEECHHHHCCCHH
VVKTIDTVAAGDAFNGGLAAALDTGLSLKEAVKWGAAAGALCTTKPGAQPAMPDRKTFDN
HHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHH
FLLKR
HHHCC
>Mature Secondary Structure 
SIIIFGSVNIDLIATTPRLPTPGETINGNNFFTAGGGKGANQAVAAAGLGIPTKIVGRV
EEEEEECCCEEEEEECCCCCCCCCEECCCEEEECCCCCCCCHHHHHHCCCCCHHHHHCC
GNDSFGQQLLVSLSTANVDTTDVLVDENTHTGVAVIAVGASGENNIIVVPGANHSINNTD
CCCHHHHHEEEEEECCCCCCEEEEEECCCCCCEEEEEEECCCCCCEEEEECCCCCCCCHH
VERLKNLLSDVTALLLQLEIPVEVAISAAKVAQEMGVKVILDPAPMPANFPNDFYNLIDI
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHC
ITPNEIEASQLVGFEVNNQETAMEAAVELCHRGVKNAVVKIGDRGVICATKEEAFFQPAF
CCCCCCCHHHEEEEEECCHHHHHHHHHHHHHHCHHHHHEEECCCCEEEEECHHHHCCCHH
VVKTIDTVAAGDAFNGGLAAALDTGLSLKEAVKWGAAAGALCTTKPGAQPAMPDRKTFDN
HHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHH
FLLKR
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]