Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474662

Identifier: 113474662

GI number: 113474662

Start: 1330521

End: 1331741

Strand: Reverse

Name: 113474662

Synonym: Tery_0837

Alternate gene names: NA

Gene position: 1331741-1330521 (Counterclockwise)

Preceding gene: 113474663

Following gene: 113474658

Centisome position: 17.18

GC content: 33.99

Gene sequence:

>1221_bases
ATGGAAGACATTAACGATCAAATTATCAATATGATGGCAGATTTTTTCGGCATTTTTGGTCAAAAAGAAGCCTTTACTCT
ACTAATAGCAATTGATAGAGAAACAAATTACAACGACTTCTTAAAAGCTGAAGCTGGTTTTAATAGCTATAAACTAGCTA
TTCTAGATAAAGGCATTCAAAATTCTCCCTATCAAAATCAGGTGGAAAATTATCCAGAACATCTAAAAATGCTGTCTAGT
TTAGCAACCCCACGGGCAAAAGCTTTTCCCCATGTTGGTGAACTTCCAGAAATTGATGAACAAGCACTTAGTTTTATTCA
TCCTGATATTAAAGAAGCTTGTATTTGCCTAGGTGGTAATGCTGGCGGACTCTTTAAATCTCGTTGGTTAGGTAGAAATT
CTCTGGATAAATGTCAGTATTGGAGTTCTACTAAAGTCATTGCAATTTTAAATATAATTTGTTCTCTTAGTTCTCTTAAT
AATGATATTAATACCTGTCAAATTCGAGGCGATGGAAAAAATATAGACTTTAATGAAGCTGTAGAAGATGTGATTACTTA
TGCAGAAAAGGTAGGTAGTTCTAACGCTTTATCTGCAATGTTTAAATGCTTCCAAACTTATGTTGGTTTAGAATCATGGT
TGAAGGAAATTACAGGTAATAATCATACAGAATTTCAAGGTTTATATGGTGAAGAACCCTTTATTATATCTCCTGAAATT
GTACAAGATAATCAAGTTTTATTGAGTGCTGTATCAGAAATTAAAAAGCCAGAAGACCAGACAGGAGAAAATGTTGTTAC
TGCTTATGACCTAACCAGAATTATGTCAATGGTAGGGTGGTATTATCATTTGCCAGAACCAGCAAAACTACCAGGAATGT
CTTGGAAAAATTTGCAACCTTTGATTAGGAATACTGGCAAAGATTCTGCTCGTTATGTAGATGTAGCTCTAGAAAAATTG
GGAATTCAAAATAGTATTAAATATCCTGTTATTTTATCTAAATTGGGTTTTGGATATACCAAGAGTCGTAAGCGTACAGA
ACTTACTTATACTTGTTTTACTCAGTTTGAATATCAGGAAAAAGTTAAGTCCATAGCTATGACTTTGCGGGGTGCAAAAG
CTTTAGGAGACTGTGACAGAGAAGCAGTAGAAATAGATGCTCGGATGGCAGCAGAAGTAACAGAAATTATCAGACTTTTA
GTAACAGATGAACTGGTTTAA

Upstream 100 bases:

>100_bases
TAAATTTCTTCTTTTTATTCATGCAAAATAAATTATTTTTAGAAAATGTTATAGTTAAATATATTAGTAAAAATCGTCCA
ATTTAGCACTCTATCAAATT

Downstream 100 bases:

>100_bases
CGAACTCCAAACTCAGAAGGCGCGAACTTAAAGTTCAGAACTCCAAACTCAAAAGTTAAATTCATAGCAGTGACTAAATC
AGAATTTACCCACTTAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MEDINDQIINMMADFFGIFGQKEAFTLLIAIDRETNYNDFLKAEAGFNSYKLAILDKGIQNSPYQNQVENYPEHLKMLSS
LATPRAKAFPHVGELPEIDEQALSFIHPDIKEACICLGGNAGGLFKSRWLGRNSLDKCQYWSSTKVIAILNIICSLSSLN
NDINTCQIRGDGKNIDFNEAVEDVITYAEKVGSSNALSAMFKCFQTYVGLESWLKEITGNNHTEFQGLYGEEPFIISPEI
VQDNQVLLSAVSEIKKPEDQTGENVVTAYDLTRIMSMVGWYYHLPEPAKLPGMSWKNLQPLIRNTGKDSARYVDVALEKL
GIQNSIKYPVILSKLGFGYTKSRKRTELTYTCFTQFEYQEKVKSIAMTLRGAKALGDCDREAVEIDARMAAEVTEIIRLL
VTDELV

Sequences:

>Translated_406_residues
MEDINDQIINMMADFFGIFGQKEAFTLLIAIDRETNYNDFLKAEAGFNSYKLAILDKGIQNSPYQNQVENYPEHLKMLSS
LATPRAKAFPHVGELPEIDEQALSFIHPDIKEACICLGGNAGGLFKSRWLGRNSLDKCQYWSSTKVIAILNIICSLSSLN
NDINTCQIRGDGKNIDFNEAVEDVITYAEKVGSSNALSAMFKCFQTYVGLESWLKEITGNNHTEFQGLYGEEPFIISPEI
VQDNQVLLSAVSEIKKPEDQTGENVVTAYDLTRIMSMVGWYYHLPEPAKLPGMSWKNLQPLIRNTGKDSARYVDVALEKL
GIQNSIKYPVILSKLGFGYTKSRKRTELTYTCFTQFEYQEKVKSIAMTLRGAKALGDCDREAVEIDARMAAEVTEIIRLL
VTDELV
>Mature_406_residues
MEDINDQIINMMADFFGIFGQKEAFTLLIAIDRETNYNDFLKAEAGFNSYKLAILDKGIQNSPYQNQVENYPEHLKMLSS
LATPRAKAFPHVGELPEIDEQALSFIHPDIKEACICLGGNAGGLFKSRWLGRNSLDKCQYWSSTKVIAILNIICSLSSLN
NDINTCQIRGDGKNIDFNEAVEDVITYAEKVGSSNALSAMFKCFQTYVGLESWLKEITGNNHTEFQGLYGEEPFIISPEI
VQDNQVLLSAVSEIKKPEDQTGENVVTAYDLTRIMSMVGWYYHLPEPAKLPGMSWKNLQPLIRNTGKDSARYVDVALEKL
GIQNSIKYPVILSKLGFGYTKSRKRTELTYTCFTQFEYQEKVKSIAMTLRGAKALGDCDREAVEIDARMAAEVTEIIRLL
VTDELV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45634; Mature: 45634

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDINDQIINMMADFFGIFGQKEAFTLLIAIDRETNYNDFLKAEAGFNSYKLAILDKGIQ
CCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHCCCCCCEEEEEEECCCC
NSPYQNQVENYPEHLKMLSSLATPRAKAFPHVGELPEIDEQALSFIHPDIKEACICLGGN
CCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHEEECCC
AGGLFKSRWLGRNSLDKCQYWSSTKVIAILNIICSLSSLNNDINTCQIRGDGKNIDFNEA
CCCCHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHH
VEDVITYAEKVGSSNALSAMFKCFQTYVGLESWLKEITGNNHTEFQGLYGEEPFIISPEI
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEECCCH
VQDNQVLLSAVSEIKKPEDQTGENVVTAYDLTRIMSMVGWYYHLPEPAKLPGMSWKNLQP
HCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
LIRNTGKDSARYVDVALEKLGIQNSIKYPVILSKLGFGYTKSRKRTELTYTCFTQFEYQE
HHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHH
KVKSIAMTLRGAKALGDCDREAVEIDARMAAEVTEIIRLLVTDELV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEDINDQIINMMADFFGIFGQKEAFTLLIAIDRETNYNDFLKAEAGFNSYKLAILDKGIQ
CCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHCCCCCCEEEEEEECCCC
NSPYQNQVENYPEHLKMLSSLATPRAKAFPHVGELPEIDEQALSFIHPDIKEACICLGGN
CCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHEEECCC
AGGLFKSRWLGRNSLDKCQYWSSTKVIAILNIICSLSSLNNDINTCQIRGDGKNIDFNEA
CCCCHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHH
VEDVITYAEKVGSSNALSAMFKCFQTYVGLESWLKEITGNNHTEFQGLYGEEPFIISPEI
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEECCCH
VQDNQVLLSAVSEIKKPEDQTGENVVTAYDLTRIMSMVGWYYHLPEPAKLPGMSWKNLQP
HCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
LIRNTGKDSARYVDVALEKLGIQNSIKYPVILSKLGFGYTKSRKRTELTYTCFTQFEYQE
HHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHH
KVKSIAMTLRGAKALGDCDREAVEIDARMAAEVTEIIRLLVTDELV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA