| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474635
Identifier: 113474635
GI number: 113474635
Start: 1282029
End: 1282319
Strand: Reverse
Name: 113474635
Synonym: Tery_0806
Alternate gene names: NA
Gene position: 1282319-1282029 (Counterclockwise)
Preceding gene: 113474636
Following gene: 113474633
Centisome position: 16.55
GC content: 34.02
Gene sequence:
>291_bases GTGAGTATTTATATGGGCTCTATGAGTTTCGTAGCCAGGCACAAGTATAAGTGCAAACTATATGGCTCGCAACTAATAGT TGTTGATAAAATATCTCCAAAAAAGGTTTTCAATACTTTAACCCACCGTTACCAAATTGGTATTTTTGGAGAAGTCTATA GAAGAAATTCTTGTTCTCAAACTTGCTCAAACTGTGAATTTGTTTTGCAGTCTCTGTTGTCATCAGAACGGGTTTTTAAT TTTGAAAACTCCATTCAAGTTTTGGTGAGGGCTAATTTTTTTGATAGATAA
Upstream 100 bases:
>100_bases TCTTAACTATAGCTAGATAGCAATAGAAAACTGTTCTGTTCAGGTAGAATAGCTAACCATAACCTACCCCCATCTCCTCG CTGGTAGGGGAGCAATAGAG
Downstream 100 bases:
>100_bases GAAAGGTTAATGAATACGGTATGCTCCTTTTCCCATTTCCCAAGCTGCTTGAAAGAAATCTCGTTCGCAGACCATGGCAT AACAATAAATTGATTCTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MSIYMGSMSFVARHKYKCKLYGSQLIVVDKISPKKVFNTLTHRYQIGIFGEVYRRNSCSQTCSNCEFVLQSLLSSERVFN FENSIQVLVRANFFDR
Sequences:
>Translated_96_residues MSIYMGSMSFVARHKYKCKLYGSQLIVVDKISPKKVFNTLTHRYQIGIFGEVYRRNSCSQTCSNCEFVLQSLLSSERVFN FENSIQVLVRANFFDR >Mature_95_residues SIYMGSMSFVARHKYKCKLYGSQLIVVDKISPKKVFNTLTHRYQIGIFGEVYRRNSCSQTCSNCEFVLQSLLSSERVFNF ENSIQVLVRANFFDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11205; Mature: 11074
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIYMGSMSFVARHKYKCKLYGSQLIVVDKISPKKVFNTLTHRYQIGIFGEVYRRNSCSQ CEEEECCHHHHHHCCEEEEEECCEEEEEECCCHHHHHHHHHHHEEECCHHHHHHCCCHHH TCSNCEFVLQSLLSSERVFNFENSIQVLVRANFFDR HHHHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCC >Mature Secondary Structure SIYMGSMSFVARHKYKCKLYGSQLIVVDKISPKKVFNTLTHRYQIGIFGEVYRRNSCSQ EEEECCHHHHHHCCEEEEEECCEEEEEECCCHHHHHHHHHHHEEECCHHHHHHCCCHHH TCSNCEFVLQSLLSSERVFNFENSIQVLVRANFFDR HHHHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA