| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474551
Identifier: 113474551
GI number: 113474551
Start: 1141614
End: 1141853
Strand: Reverse
Name: 113474551
Synonym: Tery_0705
Alternate gene names: NA
Gene position: 1141853-1141614 (Counterclockwise)
Preceding gene: 113474554
Following gene: 113474550
Centisome position: 14.73
GC content: 37.5
Gene sequence:
>240_bases ATGCGGTTTCGGGAATTAATGGCTGATGTTTTTCATTGCTTAGGCATGAGTAATATTGAGGGTTTAGTGTCGATGAGTGA TATCAAATATAGCCCTATTATTAACTCTGGTATTAAAATAGTGGAGCGAGTGCCTATTCGTGATCAGTTGGTGCCAGAAG ATGTCCCAGTAGAAATTGCGGCCAAGAAAGCGACAGCTTATTATACAAATAAAGAAGTTCCAGATGAGAATATTTTTTAA
Upstream 100 bases:
>100_bases ACGACTAATGTTGATTTAAATACTAATAGTTAGATTTATATTATACTACCATATAAATCATAATTTTCCTGGGACTGAAT GTGTAGTAGGATTACAAAAT
Downstream 100 bases:
>100_bases CCATTAAAGGGAGAAACTTAGCTGATTAAAATATGAAAGATTCATCTATCAAAGAGTCAAAAGAGTCAAAAGAGTCAAAA GATTCAAAAGATTCAAAAGA
Product: GTP cyclohydrolase II domain-containing protein
Products: NA
Alternate protein names: GTP Cyclohydrolase II Domain-Containing Protein
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MRFRELMADVFHCLGMSNIEGLVSMSDIKYSPIINSGIKIVERVPIRDQLVPEDVPVEIAAKKATAYYTNKEVPDENIF
Sequences:
>Translated_79_residues MRFRELMADVFHCLGMSNIEGLVSMSDIKYSPIINSGIKIVERVPIRDQLVPEDVPVEIAAKKATAYYTNKEVPDENIF >Mature_79_residues MRFRELMADVFHCLGMSNIEGLVSMSDIKYSPIINSGIKIVERVPIRDQLVPEDVPVEIAAKKATAYYTNKEVPDENIF
Specific function: Unknown
COG id: COG0807
COG function: function code H; GTP cyclohydrolase II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8958; Mature: 8958
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFRELMADVFHCLGMSNIEGLVSMSDIKYSPIINSGIKIVERVPIRDQLVPEDVPVEIA CCHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEE AKKATAYYTNKEVPDENIF CCCCEEEECCCCCCCCCCC >Mature Secondary Structure MRFRELMADVFHCLGMSNIEGLVSMSDIKYSPIINSGIKIVERVPIRDQLVPEDVPVEIA CCHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEEE AKKATAYYTNKEVPDENIF CCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA