| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474550
Identifier: 113474550
GI number: 113474550
Start: 1141057
End: 1141581
Strand: Reverse
Name: 113474550
Synonym: Tery_0704
Alternate gene names: NA
Gene position: 1141581-1141057 (Counterclockwise)
Preceding gene: 113474551
Following gene: 113474549
Centisome position: 14.73
GC content: 34.67
Gene sequence:
>525_bases ATGAAAGATTCATCTATCAAAGAGTCAAAAGAGTCAAAAGAGTCAAAAGATTCAAAAGATTCAAAAGATTCATCTATCAA AGAGTCATTTAAGAGTCATTTTAAAGAGTCATTTATCCAAGCTGCTGGAAGGCATTTATATGATGCAGAAATTATGCTAG CTCAACATCGTTGGGATAATGCAGTTTACTTGGCAGGCTATGTGGTAGAATGTACTCTTAAAGTTATAGTAGAGCAATAT ATTAACAATAAAGCTTGTCAAAAATTCGGTCACAATTTAAGACAACTTCAAGGTAAAGGCATTGGAAGATTACGGATAAT TTATCCTATTCTTGATGCTCAACTGTCAATTTCCCGGATAAAAGGGACAGTTTTAGCTGAATATCATCCAGAGCGACGTT ATTTTCAGTCTGGTTGGTGCAAGGAATTCAAGGCAAAAGAAGCAGTTAAACGAGCAGCAGAAATCTATAACGAAATTATT CCCAAACTAATTTTGGATGGTAGGATATCTAGTGAGGAGCTTTAA
Upstream 100 bases:
>100_bases AAATTGCGGCCAAGAAAGCGACAGCTTATTATACAAATAAAGAAGTTCCAGATGAGAATATTTTTTAACCATTAAAGGGA GAAACTTAGCTGATTAAAAT
Downstream 100 bases:
>100_bases ATGACTAATATTACTTTCAGTGAAACATTTGACAAAGTGCAAGAATGCTTTGAAGAATCTTCTATAAAAGACCAACTAGA ATCAATAACTATAATTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MKDSSIKESKESKESKDSKDSKDSSIKESFKSHFKESFIQAAGRHLYDAEIMLAQHRWDNAVYLAGYVVECTLKVIVEQY INNKACQKFGHNLRQLQGKGIGRLRIIYPILDAQLSISRIKGTVLAEYHPERRYFQSGWCKEFKAKEAVKRAAEIYNEII PKLILDGRISSEEL
Sequences:
>Translated_174_residues MKDSSIKESKESKESKDSKDSKDSSIKESFKSHFKESFIQAAGRHLYDAEIMLAQHRWDNAVYLAGYVVECTLKVIVEQY INNKACQKFGHNLRQLQGKGIGRLRIIYPILDAQLSISRIKGTVLAEYHPERRYFQSGWCKEFKAKEAVKRAAEIYNEII PKLILDGRISSEEL >Mature_174_residues MKDSSIKESKESKESKDSKDSKDSSIKESFKSHFKESFIQAAGRHLYDAEIMLAQHRWDNAVYLAGYVVECTLKVIVEQY INNKACQKFGHNLRQLQGKGIGRLRIIYPILDAQLSISRIKGTVLAEYHPERRYFQSGWCKEFKAKEAVKRAAEIYNEII PKLILDGRISSEEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20044; Mature: 20044
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: PS00014 ER_TARGET
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDSSIKESKESKESKDSKDSKDSSIKESFKSHFKESFIQAAGRHLYDAEIMLAQHRWDN CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC AVYLAGYVVECTLKVIVEQYINNKACQKFGHNLRQLQGKGIGRLRIIYPILDAQLSISRI EEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHH KGTVLAEYHPERRYFQSGWCKEFKAKEAVKRAAEIYNEIIPKLILDGRISSEEL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKDSSIKESKESKESKDSKDSKDSSIKESFKSHFKESFIQAAGRHLYDAEIMLAQHRWDN CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC AVYLAGYVVECTLKVIVEQYINNKACQKFGHNLRQLQGKGIGRLRIIYPILDAQLSISRI EEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHH KGTVLAEYHPERRYFQSGWCKEFKAKEAVKRAAEIYNEIIPKLILDGRISSEEL HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA