Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474550

Identifier: 113474550

GI number: 113474550

Start: 1141057

End: 1141581

Strand: Reverse

Name: 113474550

Synonym: Tery_0704

Alternate gene names: NA

Gene position: 1141581-1141057 (Counterclockwise)

Preceding gene: 113474551

Following gene: 113474549

Centisome position: 14.73

GC content: 34.67

Gene sequence:

>525_bases
ATGAAAGATTCATCTATCAAAGAGTCAAAAGAGTCAAAAGAGTCAAAAGATTCAAAAGATTCAAAAGATTCATCTATCAA
AGAGTCATTTAAGAGTCATTTTAAAGAGTCATTTATCCAAGCTGCTGGAAGGCATTTATATGATGCAGAAATTATGCTAG
CTCAACATCGTTGGGATAATGCAGTTTACTTGGCAGGCTATGTGGTAGAATGTACTCTTAAAGTTATAGTAGAGCAATAT
ATTAACAATAAAGCTTGTCAAAAATTCGGTCACAATTTAAGACAACTTCAAGGTAAAGGCATTGGAAGATTACGGATAAT
TTATCCTATTCTTGATGCTCAACTGTCAATTTCCCGGATAAAAGGGACAGTTTTAGCTGAATATCATCCAGAGCGACGTT
ATTTTCAGTCTGGTTGGTGCAAGGAATTCAAGGCAAAAGAAGCAGTTAAACGAGCAGCAGAAATCTATAACGAAATTATT
CCCAAACTAATTTTGGATGGTAGGATATCTAGTGAGGAGCTTTAA

Upstream 100 bases:

>100_bases
AAATTGCGGCCAAGAAAGCGACAGCTTATTATACAAATAAAGAAGTTCCAGATGAGAATATTTTTTAACCATTAAAGGGA
GAAACTTAGCTGATTAAAAT

Downstream 100 bases:

>100_bases
ATGACTAATATTACTTTCAGTGAAACATTTGACAAAGTGCAAGAATGCTTTGAAGAATCTTCTATAAAAGACCAACTAGA
ATCAATAACTATAATTCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKDSSIKESKESKESKDSKDSKDSSIKESFKSHFKESFIQAAGRHLYDAEIMLAQHRWDNAVYLAGYVVECTLKVIVEQY
INNKACQKFGHNLRQLQGKGIGRLRIIYPILDAQLSISRIKGTVLAEYHPERRYFQSGWCKEFKAKEAVKRAAEIYNEII
PKLILDGRISSEEL

Sequences:

>Translated_174_residues
MKDSSIKESKESKESKDSKDSKDSSIKESFKSHFKESFIQAAGRHLYDAEIMLAQHRWDNAVYLAGYVVECTLKVIVEQY
INNKACQKFGHNLRQLQGKGIGRLRIIYPILDAQLSISRIKGTVLAEYHPERRYFQSGWCKEFKAKEAVKRAAEIYNEII
PKLILDGRISSEEL
>Mature_174_residues
MKDSSIKESKESKESKDSKDSKDSSIKESFKSHFKESFIQAAGRHLYDAEIMLAQHRWDNAVYLAGYVVECTLKVIVEQY
INNKACQKFGHNLRQLQGKGIGRLRIIYPILDAQLSISRIKGTVLAEYHPERRYFQSGWCKEFKAKEAVKRAAEIYNEII
PKLILDGRISSEEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20044; Mature: 20044

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS00014 ER_TARGET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDSSIKESKESKESKDSKDSKDSSIKESFKSHFKESFIQAAGRHLYDAEIMLAQHRWDN
CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
AVYLAGYVVECTLKVIVEQYINNKACQKFGHNLRQLQGKGIGRLRIIYPILDAQLSISRI
EEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHH
KGTVLAEYHPERRYFQSGWCKEFKAKEAVKRAAEIYNEIIPKLILDGRISSEEL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKDSSIKESKESKESKDSKDSKDSSIKESFKSHFKESFIQAAGRHLYDAEIMLAQHRWDN
CCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
AVYLAGYVVECTLKVIVEQYINNKACQKFGHNLRQLQGKGIGRLRIIYPILDAQLSISRI
EEEHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHH
KGTVLAEYHPERRYFQSGWCKEFKAKEAVKRAAEIYNEIIPKLILDGRISSEEL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA