Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474496

Identifier: 113474496

GI number: 113474496

Start: 1049819

End: 1051168

Strand: Reverse

Name: 113474496

Synonym: Tery_0643

Alternate gene names: NA

Gene position: 1051168-1049819 (Counterclockwise)

Preceding gene: 113474501

Following gene: 113474494

Centisome position: 13.56

GC content: 32.3

Gene sequence:

>1350_bases
ATGACTCCAAATCCTGCAATAATGACAGCTGTGGAGAATCTGGACTACCGTGTTACTTTAGGGGATGTAGCAGCTCAAGC
TGGATTAGATATTAAAGTCGCAGAACAAGCATTATTAGCTTTAGCTACAGATGCTGGTGGTCATTTACAAGTATCAGAAT
CAGGAGAAATTGCTTATTTATTTCCCAATAATTTTAGAAGTATTTTACGCAATAAATTCTGGCGCTTAAGATTGAGAGAA
TGGTGGGAAAAAGTTTGGCGAATATTGTTTTATTTAATTAGAGTTTCTTTCGGATTTTTATTGATACTTTCTATAATAAT
TATAATGGTTGCTATTGCCATCATTGTTATTTCAATTAACTCTAGTAGTGAACAAAATGACTCATGTGAAGGGGAAAATA
ATTCGGGCGCTAGTATGGGATTTTTTCCGCGGTTTGGATTTAATCCTTATTGGTTGTGGTTGTTTGATTGGGGATACTAC
GATCAACCCTATAGATATCAACGTAAAAATCAAAGAAAAACAAATAAATCTTTTATTCCAAAAAAAGAAAATGAAATGAA
TTTTTTGGAGGCTATATTTTCTTTTCTCTTTGGAGACGGGAACCCTAATTACAATTTAGATGAGCAACGTTGGCAGGCGA
TCGCTACTGTAATTAAAAATAATCAAGGTGCAGTAGTTGCCGAACAAATTGCTCCTTATTTAGATGATTTAGGGAAAGAA
TATGCTGTAGAATATGAAGAGTATATTTTACCAGTATTAATTCGTTTTAATGGTCGACCAGAAGTTAGTCCTGATGGTCA
AATTGTTTATCATTTTCCTGATTTACAAACAACAGCAAAACAATGGCATTTTGAACCTGTTTCTACTTATTTAATAGAAA
AAAAATTGCGTTTTAGTAAAGCCAATTCTAATCAAATTATGTTGGCAATTGGATTAGGTGCTGTTAATTTTATTGGTGCT
TTAGTTTTAGGTTCATTGTTAGAAGATGATAGAATGATAGAGCAGATTGGGTGGATTATTAATTTTGTTGAAGTTATTTA
TCCTGTGCTACTAGCTTATGGTATTAGTTTTCTAGTATTACCATTCATTCGTTATTTTTGGGTACAATGGCGTAATGGTA
AAGTTGAGAAAAGAAATCAACAAAGAAAAAACAGAACTATTGCTTTAAACCAAGCTAGTAATCTGTTAATTCGGAAAATT
GATTATGCTAGAGAATTTGCAAAAGAAACAATTATTAGTAATCAAGATTTGGCCTATACAACGGAAAAGAATATCCTAGA
ACAGGAAGCTGAACAGACAGATAAAATTGATGCTGAATGGCAAAAAAGATTGAATCAATCAGATGTTTAA

Upstream 100 bases:

>100_bases
TACAATTGATCATATTGTAGACAATATCCAGATGAATATTGGATACTTTGACATATTTACTTATAATTTAAAATAGGTCA
ATTAAGTTTGAGGTAATGTT

Downstream 100 bases:

>100_bases
AATATTAGTAAAAGTTGTGAAGCATTCATAATTTACATTGTAATTTTCGGGCGTTTAAATATGAGGTAATTATTATCAGA
TTTTGAGTTATGACTAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 449; Mature: 448

Protein sequence:

>449_residues
MTPNPAIMTAVENLDYRVTLGDVAAQAGLDIKVAEQALLALATDAGGHLQVSESGEIAYLFPNNFRSILRNKFWRLRLRE
WWEKVWRILFYLIRVSFGFLLILSIIIIMVAIAIIVISINSSSEQNDSCEGENNSGASMGFFPRFGFNPYWLWLFDWGYY
DQPYRYQRKNQRKTNKSFIPKKENEMNFLEAIFSFLFGDGNPNYNLDEQRWQAIATVIKNNQGAVVAEQIAPYLDDLGKE
YAVEYEEYILPVLIRFNGRPEVSPDGQIVYHFPDLQTTAKQWHFEPVSTYLIEKKLRFSKANSNQIMLAIGLGAVNFIGA
LVLGSLLEDDRMIEQIGWIINFVEVIYPVLLAYGISFLVLPFIRYFWVQWRNGKVEKRNQQRKNRTIALNQASNLLIRKI
DYAREFAKETIISNQDLAYTTEKNILEQEAEQTDKIDAEWQKRLNQSDV

Sequences:

>Translated_449_residues
MTPNPAIMTAVENLDYRVTLGDVAAQAGLDIKVAEQALLALATDAGGHLQVSESGEIAYLFPNNFRSILRNKFWRLRLRE
WWEKVWRILFYLIRVSFGFLLILSIIIIMVAIAIIVISINSSSEQNDSCEGENNSGASMGFFPRFGFNPYWLWLFDWGYY
DQPYRYQRKNQRKTNKSFIPKKENEMNFLEAIFSFLFGDGNPNYNLDEQRWQAIATVIKNNQGAVVAEQIAPYLDDLGKE
YAVEYEEYILPVLIRFNGRPEVSPDGQIVYHFPDLQTTAKQWHFEPVSTYLIEKKLRFSKANSNQIMLAIGLGAVNFIGA
LVLGSLLEDDRMIEQIGWIINFVEVIYPVLLAYGISFLVLPFIRYFWVQWRNGKVEKRNQQRKNRTIALNQASNLLIRKI
DYAREFAKETIISNQDLAYTTEKNILEQEAEQTDKIDAEWQKRLNQSDV
>Mature_448_residues
TPNPAIMTAVENLDYRVTLGDVAAQAGLDIKVAEQALLALATDAGGHLQVSESGEIAYLFPNNFRSILRNKFWRLRLREW
WEKVWRILFYLIRVSFGFLLILSIIIIMVAIAIIVISINSSSEQNDSCEGENNSGASMGFFPRFGFNPYWLWLFDWGYYD
QPYRYQRKNQRKTNKSFIPKKENEMNFLEAIFSFLFGDGNPNYNLDEQRWQAIATVIKNNQGAVVAEQIAPYLDDLGKEY
AVEYEEYILPVLIRFNGRPEVSPDGQIVYHFPDLQTTAKQWHFEPVSTYLIEKKLRFSKANSNQIMLAIGLGAVNFIGAL
VLGSLLEDDRMIEQIGWIINFVEVIYPVLLAYGISFLVLPFIRYFWVQWRNGKVEKRNQQRKNRTIALNQASNLLIRKID
YAREFAKETIISNQDLAYTTEKNILEQEAEQTDKIDAEWQKRLNQSDV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52042; Mature: 51911

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPNPAIMTAVENLDYRVTLGDVAAQAGLDIKVAEQALLALATDAGGHLQVSESGEIAYL
CCCCCHHHHHHHCCCEEEEEHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCEEEE
FPNNFRSILRNKFWRLRLREWWEKVWRILFYLIRVSFGFLLILSIIIIMVAIAIIVISIN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
SSSEQNDSCEGENNSGASMGFFPRFGFNPYWLWLFDWGYYDQPYRYQRKNQRKTNKSFIP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCC
KKENEMNFLEAIFSFLFGDGNPNYNLDEQRWQAIATVIKNNQGAVVAEQIAPYLDDLGKE
CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH
YAVEYEEYILPVLIRFNGRPEVSPDGQIVYHFPDLQTTAKQWHFEPVSTYLIEKKLRFSK
HHHHHHHHHEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHC
ANSNQIMLAIGLGAVNFIGALVLGSLLEDDRMIEQIGWIINFVEVIYPVLLAYGISFLVL
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PFIRYFWVQWRNGKVEKRNQQRKNRTIALNQASNLLIRKIDYAREFAKETIISNQDLAYT
HHHHHHHHHCCCCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEE
TEKNILEQEAEQTDKIDAEWQKRLNQSDV
HHHHHHHHHHHHHHCCCHHHHHHCCCCCC
>Mature Secondary Structure 
TPNPAIMTAVENLDYRVTLGDVAAQAGLDIKVAEQALLALATDAGGHLQVSESGEIAYL
CCCCHHHHHHHCCCEEEEEHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCEEEE
FPNNFRSILRNKFWRLRLREWWEKVWRILFYLIRVSFGFLLILSIIIIMVAIAIIVISIN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
SSSEQNDSCEGENNSGASMGFFPRFGFNPYWLWLFDWGYYDQPYRYQRKNQRKTNKSFIP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCC
KKENEMNFLEAIFSFLFGDGNPNYNLDEQRWQAIATVIKNNQGAVVAEQIAPYLDDLGKE
CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHH
YAVEYEEYILPVLIRFNGRPEVSPDGQIVYHFPDLQTTAKQWHFEPVSTYLIEKKLRFSK
HHHHHHHHHEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHC
ANSNQIMLAIGLGAVNFIGALVLGSLLEDDRMIEQIGWIINFVEVIYPVLLAYGISFLVL
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PFIRYFWVQWRNGKVEKRNQQRKNRTIALNQASNLLIRKIDYAREFAKETIISNQDLAYT
HHHHHHHHHCCCCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEE
TEKNILEQEAEQTDKIDAEWQKRLNQSDV
HHHHHHHHHHHHHHCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA