Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474485

Identifier: 113474485

GI number: 113474485

Start: 1031502

End: 1032680

Strand: Reverse

Name: 113474485

Synonym: Tery_0631

Alternate gene names: NA

Gene position: 1032680-1031502 (Counterclockwise)

Preceding gene: 113474486

Following gene: 113474482

Centisome position: 13.32

GC content: 32.49

Gene sequence:

>1179_bases
ATGAAAAATATTTTATTTGTTCTGTACGAAGATTTCCATTCTAATAGTGCGCTGCATGTGCATCATTTTGCTAATAATTT
GGTTAAATTGGGTTTTGATTGTGTGGTAGCTGTACCTAAAAATAAACAGACTGTTTCAATGGTCGGAAAACATTTAGCAA
ATTTGTATCAAGTGACAGAATATGGAGAATTTTATCGCTTAAATGAATGCTTTAAAAATCAACAAGGACCGGATATTATT
CATGTTTGGACTCCTAGGGAAGTTACTAGAAATTACTGCTATAAACTCCGGAAAATTTATGACTTTAAGTTAGTTATTCA
CTTGGAAGATAATGAGGAACATGTCTTAGAAAAATACTTAAATAAACCTTTTGAAGAAATTATTACTGCTAATGGAAGTC
TGGAAATTCCTGATAATCTTTCTCATCCTCAAAAATATCAGGAATTTCTCGCAAGTGCGGATGGAGTGACAGTTATTATT
GAAAAATTAAAAAAATTTGTGCCCAATAATGTGCCGAGTTTAATTTTATGGCCTGGTGTAGAAACTGAGCATTTTTATCC
GAGAAATTCTAATCCAGAAATAGCTAAAAAATTTGGTGTCCCTGACAATAGTCTGGTTTTTTCTTACACTGGAAATGTTC
ATGCTGCTAATACCTATGAGGTGAGAAGTTTATATTTAGCAGTGGCAATATTAAACCGAGAAGGTCAACCTGCAGTTTTA
ATTAGAACTGGTAGAGATTTCTGTAATTTTTTGGGAGATGATGATAGTTGGGCAAGACAACATGCTATTGAATTAGGATA
TGTAGACCGGAGTTTAATGCCAGAAATTTTAGCTTTAGCAAGTGTGTTAATTCAACCAGGTAGACCTGATAAATTTAATG
ATTATCGTTTCCCTTGTAAATTGCCGGAATTTTTAGCAATGGGTAAACCTGTAATTTTGCCTGCTACTAATATTGGTTTG
GTCATGGAAAATCACAAAGATGCTTTAGTTTTACCTGTGGTTGATGCAGTTAATATTGTTGATTCTGTGAAAAAATTGTT
GAATGTTGATTCTAATTATAAAAAGTTAAGTGAGGGAGCAGTTAATTTTGCCAAAACTCATCTTAACTGGCAGGAAAATA
CAAAGTTACTTCAGTCATTTTATACTGATATAGAATATGGCATTAAGGTAAGTTTATAA

Upstream 100 bases:

>100_bases
CATTGTTATTATTGTAGCTCATAAAGTGTAGGAATTACTATCAATAAAATCACTTAAAAATACTGTTAATAAAAATCTAA
CTTTCCCAGATATAGTTTTA

Downstream 100 bases:

>100_bases
GTTAGAAGCAATCCCTGGCGATTGTCATAAGCATTTATAAATGTCCTAATCTTTGCTTTGCCTGATATATTCGTTAAAAA
TACTATACATTCTTTAAAAT

Product: glycosyltransferase-like protein

Products: NA

Alternate protein names: Glycosyltransferase-Like Protein; Glycosyl Transferase Family Protein; Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MKNILFVLYEDFHSNSALHVHHFANNLVKLGFDCVVAVPKNKQTVSMVGKHLANLYQVTEYGEFYRLNECFKNQQGPDII
HVWTPREVTRNYCYKLRKIYDFKLVIHLEDNEEHVLEKYLNKPFEEIITANGSLEIPDNLSHPQKYQEFLASADGVTVII
EKLKKFVPNNVPSLILWPGVETEHFYPRNSNPEIAKKFGVPDNSLVFSYTGNVHAANTYEVRSLYLAVAILNREGQPAVL
IRTGRDFCNFLGDDDSWARQHAIELGYVDRSLMPEILALASVLIQPGRPDKFNDYRFPCKLPEFLAMGKPVILPATNIGL
VMENHKDALVLPVVDAVNIVDSVKKLLNVDSNYKKLSEGAVNFAKTHLNWQENTKLLQSFYTDIEYGIKVSL

Sequences:

>Translated_392_residues
MKNILFVLYEDFHSNSALHVHHFANNLVKLGFDCVVAVPKNKQTVSMVGKHLANLYQVTEYGEFYRLNECFKNQQGPDII
HVWTPREVTRNYCYKLRKIYDFKLVIHLEDNEEHVLEKYLNKPFEEIITANGSLEIPDNLSHPQKYQEFLASADGVTVII
EKLKKFVPNNVPSLILWPGVETEHFYPRNSNPEIAKKFGVPDNSLVFSYTGNVHAANTYEVRSLYLAVAILNREGQPAVL
IRTGRDFCNFLGDDDSWARQHAIELGYVDRSLMPEILALASVLIQPGRPDKFNDYRFPCKLPEFLAMGKPVILPATNIGL
VMENHKDALVLPVVDAVNIVDSVKKLLNVDSNYKKLSEGAVNFAKTHLNWQENTKLLQSFYTDIEYGIKVSL
>Mature_392_residues
MKNILFVLYEDFHSNSALHVHHFANNLVKLGFDCVVAVPKNKQTVSMVGKHLANLYQVTEYGEFYRLNECFKNQQGPDII
HVWTPREVTRNYCYKLRKIYDFKLVIHLEDNEEHVLEKYLNKPFEEIITANGSLEIPDNLSHPQKYQEFLASADGVTVII
EKLKKFVPNNVPSLILWPGVETEHFYPRNSNPEIAKKFGVPDNSLVFSYTGNVHAANTYEVRSLYLAVAILNREGQPAVL
IRTGRDFCNFLGDDDSWARQHAIELGYVDRSLMPEILALASVLIQPGRPDKFNDYRFPCKLPEFLAMGKPVILPATNIGL
VMENHKDALVLPVVDAVNIVDSVKKLLNVDSNYKKLSEGAVNFAKTHLNWQENTKLLQSFYTDIEYGIKVSL

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44755; Mature: 44755

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNILFVLYEDFHSNSALHVHHFANNLVKLGFDCVVAVPKNKQTVSMVGKHLANLYQVTE
CCCEEEEEEECCCCCCEEEEHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
YGEFYRLNECFKNQQGPDIIHVWTPREVTRNYCYKLRKIYDFKLVIHLEDNEEHVLEKYL
CCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHEEEEEEEEEEECCHHHHHHHHH
NKPFEEIITANGSLEIPDNLSHPQKYQEFLASADGVTVIIEKLKKFVPNNVPSLILWPGV
CCCHHHHHCCCCCEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEECCC
ETEHFYPRNSNPEIAKKFGVPDNSLVFSYTGNVHAANTYEVRSLYLAVAILNREGQPAVL
CCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCEEECCHHHHHHHHHHHHEECCCCCCEEE
IRTGRDFCNFLGDDDSWARQHAIELGYVDRSLMPEILALASVLIQPGRPDKFNDYRFPCK
EECCHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
LPEFLAMGKPVILPATNIGLVMENHKDALVLPVVDAVNIVDSVKKLLNVDSNYKKLSEGA
CHHHHHCCCCEEEECCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VNFAKTHLNWQENTKLLQSFYTDIEYGIKVSL
HHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEC
>Mature Secondary Structure
MKNILFVLYEDFHSNSALHVHHFANNLVKLGFDCVVAVPKNKQTVSMVGKHLANLYQVTE
CCCEEEEEEECCCCCCEEEEHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
YGEFYRLNECFKNQQGPDIIHVWTPREVTRNYCYKLRKIYDFKLVIHLEDNEEHVLEKYL
CCHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHEEEEEEEEEEECCHHHHHHHHH
NKPFEEIITANGSLEIPDNLSHPQKYQEFLASADGVTVIIEKLKKFVPNNVPSLILWPGV
CCCHHHHHCCCCCEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEECCC
ETEHFYPRNSNPEIAKKFGVPDNSLVFSYTGNVHAANTYEVRSLYLAVAILNREGQPAVL
CCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCEEECCHHHHHHHHHHHHEECCCCCCEEE
IRTGRDFCNFLGDDDSWARQHAIELGYVDRSLMPEILALASVLIQPGRPDKFNDYRFPCK
EECCHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
LPEFLAMGKPVILPATNIGLVMENHKDALVLPVVDAVNIVDSVKKLLNVDSNYKKLSEGA
CHHHHHCCCCEEEECCCEEEEEECCCCEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHH
VNFAKTHLNWQENTKLLQSFYTDIEYGIKVSL
HHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA