Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474467

Identifier: 113474467

GI number: 113474467

Start: 989491

End: 989970

Strand: Reverse

Name: 113474467

Synonym: Tery_0611

Alternate gene names: NA

Gene position: 989970-989491 (Counterclockwise)

Preceding gene: 113474476

Following gene: 113474465

Centisome position: 12.77

GC content: 35.62

Gene sequence:

>480_bases
ATGACAATTACGATCACTGTTAATACTGAACAGATCCATAACTTAGATTTATCCCCATTTGAAGGTGTAATTTATCCAAT
ACTTAATGAAGGAACGATCGCCTCTTCTGAACAGCAGCTGAATTTTGCCATTAACTATTACCAAGAACCCCAAGATCCAA
GGGAACTTTCAGAAATTCCAGAAGTGCGTTTATGGTTTATCCGTTTAGACAGTTGTTATCCTTGGTTGCCATTTCTGCTC
AACTGGAAAATGGGAGAGCTGTCTCGCTATACTGCAATGCTTGTACCTCACCAATTTCATCGAACTGAAGGTATCCAATA
TAACCCAGAAGCATTAGAAATATTTTTGATGCACAAAATTTTTATTTTGAGAAACTGGTTAAATAAACATCATATTTCTA
GTAAATCCAGATTAATGTCCATGTCTCAAATGTTGGGGTATGATTTGACAGAGGAATTTTTTGTATCAATTCCAGACTAA

Upstream 100 bases:

>100_bases
TTTGTCTTGTATCTAGGCAGTTTATGTAAGAGTGTGGCTTACTTAAGAATCCCACATTTTTTTGACAACAAAAGGAACTT
TATAATTATCTACAACCAGA

Downstream 100 bases:

>100_bases
AGGCAATCAATAATATGATATATCTGAGGAGGGAGATAAATATAAGTGGGACAGGATGCCCACCCAAAAATATAAGGAAT
AATGGGACAAAAATCACCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MTITITVNTEQIHNLDLSPFEGVIYPILNEGTIASSEQQLNFAINYYQEPQDPRELSEIPEVRLWFIRLDSCYPWLPFLL
NWKMGELSRYTAMLVPHQFHRTEGIQYNPEALEIFLMHKIFILRNWLNKHHISSKSRLMSMSQMLGYDLTEEFFVSIPD

Sequences:

>Translated_159_residues
MTITITVNTEQIHNLDLSPFEGVIYPILNEGTIASSEQQLNFAINYYQEPQDPRELSEIPEVRLWFIRLDSCYPWLPFLL
NWKMGELSRYTAMLVPHQFHRTEGIQYNPEALEIFLMHKIFILRNWLNKHHISSKSRLMSMSQMLGYDLTEEFFVSIPD
>Mature_158_residues
TITITVNTEQIHNLDLSPFEGVIYPILNEGTIASSEQQLNFAINYYQEPQDPRELSEIPEVRLWFIRLDSCYPWLPFLLN
WKMGELSRYTAMLVPHQFHRTEGIQYNPEALEIFLMHKIFILRNWLNKHHISSKSRLMSMSQMLGYDLTEEFFVSIPD

Specific function: Unknown

COG id: COG5474

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18853; Mature: 18722

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITITVNTEQIHNLDLSPFEGVIYPILNEGTIASSEQQLNFAINYYQEPQDPRELSEIP
CEEEEEEEHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHCC
EVRLWFIRLDSCYPWLPFLLNWKMGELSRYTAMLVPHQFHRTEGIQYNPEALEIFLMHKI
CEEEEEEEECCCCCCCHHHCCCCCCCHHHHHHEECCHHHHHCCCCCCCHHHHHHHHHHHH
FILRNWLNKHHISSKSRLMSMSQMLGYDLTEEFFVSIPD
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHEEECCC
>Mature Secondary Structure 
TITITVNTEQIHNLDLSPFEGVIYPILNEGTIASSEQQLNFAINYYQEPQDPRELSEIP
EEEEEEEHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHCC
EVRLWFIRLDSCYPWLPFLLNWKMGELSRYTAMLVPHQFHRTEGIQYNPEALEIFLMHKI
CEEEEEEEECCCCCCCHHHCCCCCCCHHHHHHEECCHHHHHCCCCCCCHHHHHHHHHHHH
FILRNWLNKHHISSKSRLMSMSQMLGYDLTEEFFVSIPD
HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA