Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474407

Identifier: 113474407

GI number: 113474407

Start: 861724

End: 862257

Strand: Reverse

Name: 113474407

Synonym: Tery_0545

Alternate gene names: NA

Gene position: 862257-861724 (Counterclockwise)

Preceding gene: 113474408

Following gene: 113474406

Centisome position: 11.13

GC content: 30.34

Gene sequence:

>534_bases
ATGGGTACTAAAAAATTAGTTTTGGGTATGATAGGTTCCATATTAGGTAGTGCAATTGTTGCTAATGCTGCCAGCGTAGA
ACTTAGTCTCGAACAAGAACAAGTAATATGTAAATTGAAAGAGACAGTAGAAGCACAAGAAAAAGCTGGTAAAAAACTAG
TTTTTTGGCCATTAATTGGAAAAATTAAAGAGAGAGTAGAAGTACCATTTACAACACGATTATCTTCTGATGTATCTTAC
ACTATACTTGGGGTATGTGATAATAATTGTAGTGACTTAAATTTAACTCTAAAAAATCAAAAAGGTGACAAAATAGCTAA
TGATGAAAAACAAGATGATATTTCGGTAATTTCTTTTACTCCTGCTGAAAATAGTGATTATAAAATCACTGCACGACCAG
ATAAATGTACAACTGAAAAATGTGACTTTGGCATGGTTTTATTTGCCCCTAAAAGTGTTAATATAGATATAGCATCTGAA
CTACCAGAGGAATTATATATATTTAAGTTTTGCCAACAAATAAATAAAAATTAA

Upstream 100 bases:

>100_bases
CCCCTATTCCCCTATTCCCCTATTTCCTAGTCCCTATTATTGTACAAAAGTATGTTAAACTCTTGAGTATAGTTAAGTAA
AATTTTCCTTCAGTAAATTA

Downstream 100 bases:

>100_bases
TTCCGGAAAAAAAAACTATTTTTATCCAAATCATTAATTAAATTTAATAAAATTCACATTATTATATTAAGTATATAAGT
AGGCAGATTTAATTATCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MGTKKLVLGMIGSILGSAIVANAASVELSLEQEQVICKLKETVEAQEKAGKKLVFWPLIGKIKERVEVPFTTRLSSDVSY
TILGVCDNNCSDLNLTLKNQKGDKIANDEKQDDISVISFTPAENSDYKITARPDKCTTEKCDFGMVLFAPKSVNIDIASE
LPEELYIFKFCQQINKN

Sequences:

>Translated_177_residues
MGTKKLVLGMIGSILGSAIVANAASVELSLEQEQVICKLKETVEAQEKAGKKLVFWPLIGKIKERVEVPFTTRLSSDVSY
TILGVCDNNCSDLNLTLKNQKGDKIANDEKQDDISVISFTPAENSDYKITARPDKCTTEKCDFGMVLFAPKSVNIDIASE
LPEELYIFKFCQQINKN
>Mature_176_residues
GTKKLVLGMIGSILGSAIVANAASVELSLEQEQVICKLKETVEAQEKAGKKLVFWPLIGKIKERVEVPFTTRLSSDVSYT
ILGVCDNNCSDLNLTLKNQKGDKIANDEKQDDISVISFTPAENSDYKITARPDKCTTEKCDFGMVLFAPKSVNIDIASEL
PEELYIFKFCQQINKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19570; Mature: 19439

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTKKLVLGMIGSILGSAIVANAASVELSLEQEQVICKLKETVEAQEKAGKKLVFWPLIG
CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCEEEEHHHHH
KIKERVEVPFTTRLSSDVSYTILGVCDNNCSDLNLTLKNQKGDKIANDEKQDDISVISFT
HHHHHHCCCEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEC
PAENSDYKITARPDKCTTEKCDFGMVLFAPKSVNIDIASELPEELYIFKFCQQINKN
CCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEHHHHCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GTKKLVLGMIGSILGSAIVANAASVELSLEQEQVICKLKETVEAQEKAGKKLVFWPLIG
CCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCEEEEHHHHH
KIKERVEVPFTTRLSSDVSYTILGVCDNNCSDLNLTLKNQKGDKIANDEKQDDISVISFT
HHHHHHCCCEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEC
PAENSDYKITARPDKCTTEKCDFGMVLFAPKSVNIDIASELPEELYIFKFCQQINKN
CCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCEEHHHHCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA