| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474381
Identifier: 113474381
GI number: 113474381
Start: 818923
End: 820263
Strand: Direct
Name: 113474381
Synonym: Tery_0516
Alternate gene names: NA
Gene position: 818923-820263 (Clockwise)
Preceding gene: 113474380
Following gene: 113474382
Centisome position: 10.57
GC content: 31.84
Gene sequence:
>1341_bases ATGACAAAAGTAGCAATTATAGGTTCTGGACCTTGCGGTTTATCAATTTTACGATCTTTTCAGCAAGCTGAAGAAAAAGG ACAAATAATCCCTGAATTAGTTTGTTTTGAAAAACAATCTAATTGGGGTGGTTTGTGGAATTATAGTTGGAGAACAGGAT CTGACCAATATGGTGATCCAGTTCATAATAGTATGTATCGATATCTCTGGTCAAATGGACCAAAAGAATGTCTAGAATTT GCTGATTACTCTTTTGATGAACATTTTCAACAACCTATCCCTTCTTTCCCTCCTCGTGAAGTTTTGTATGACTATATTTT AGGTCGTGCAAAAAAAAGTAATCTTAAAAAATATATTAAATTTAATACAGTAGTAAATAATGTTGTTTTTAATGATGATC AATTTGTAATTACTTCTTTAAATAAAAAAGAAAATTCAATTTCTCAGGAAAATTTTGATTATTTAGTTGTTGCTACTGGA CATTTTTCAGTTCCTTATGTTCCTGAATATGAAGGAATGAATTCTTTTCCAGGAAGAATTTTGCATAGCCATGATTTTAG AGATGCAGAAGAATTTAGAAATAAGGATGTAGTTGTTTTAGGCAGCAGTTATTCTGCAGAAGATATAGCTCTTCAATGCT ATAAGTACGGCGCCAAATCAGTAACTATTGGCTATAGAAATAACCCCATAGGTTTTGAGTGGCCAGAAGGAATGAAAGAA GTTCACTATTTAGATAAACTTGAAGGCAATAAAGCAACTTTTAAGGATGGTCACACTCAAAATGTAGATGCTCTTATTTT ATGTAGTGGTTATCTTCATCATTTTCCTTTTTTAGAAGAAAGTTTAAAATTAAAAACACATAATAGACTATATCCTCCTA AACTCTATAAAGGAGTTGTTTGGCAAGATAATCACAAACTATTTTATCTTGGTATGCAGGATCAATTTTATACTTTTAAC ATGTTTGATTGTCAAGCCTGGTATGCAAGAGATGTAATAATGGGAAAGACTCAAGTTCCAGATGATGCAGAAATTGAAAA AGATATCAATAATTGGGTAGTAAAAGAGGAAGCTTTAGAGGACTCCATTCAAATGATTGACTTTCAAACTGAGTATACAA AAGATCTTCAGGTTGCTTCTGATTATCCCAAAATAGATTTTGAATTAATTAGAACACATCTTAAGGAATGGAAACATCAT AAGGAAGAAAATATTATGACTTATAGAGATAAATCATTTTCTTCTCCAGTAACAGGAACGGTTGCGCCACTTCATCATAC ACCTTGGGTTGAAGCGATGGATGATTCAATGACAACCTTTATGAAAGCTAAATCTTCTTAA
Upstream 100 bases:
>100_bases AGAGACTGCGGTCAGTGGTATAAGCTTCGAACACCGCAGCTAGCTCTAAGGTTATGAAATCATGCTTATGTAATTCTGAG TAAGTTTAGTAGGAAGGATG
Downstream 100 bases:
>100_bases TTTTATACTATTAAAAGAAAAAAAGATGCAATAGAATATTGACTTAATTGATAATAAATATTTCAAATACTAATAATGGG GTACAACTAGACAAAAAAGC
Product: flavin-containing monooxygenase FMO
Products: NA
Alternate protein names: Flavin-Containing Monooxygenase FMO; Dimethylaniline Monooxygenase; Monooxygenase Domain-Containing Protein; Monooxygenase Domain Protein; Oxidoreductase Protein; Flavin-Containing Monooxygenases; Oxidoreductase; Flavoprotein Involved In K+ Transport; Monooxygenase; Dimethylaniline Monoxygenase; Monooxygenase Flavin-Contaning; Flavin Containing Monooxygenae; Monooxygenase Protein
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MTKVAIIGSGPCGLSILRSFQQAEEKGQIIPELVCFEKQSNWGGLWNYSWRTGSDQYGDPVHNSMYRYLWSNGPKECLEF ADYSFDEHFQQPIPSFPPREVLYDYILGRAKKSNLKKYIKFNTVVNNVVFNDDQFVITSLNKKENSISQENFDYLVVATG HFSVPYVPEYEGMNSFPGRILHSHDFRDAEEFRNKDVVVLGSSYSAEDIALQCYKYGAKSVTIGYRNNPIGFEWPEGMKE VHYLDKLEGNKATFKDGHTQNVDALILCSGYLHHFPFLEESLKLKTHNRLYPPKLYKGVVWQDNHKLFYLGMQDQFYTFN MFDCQAWYARDVIMGKTQVPDDAEIEKDINNWVVKEEALEDSIQMIDFQTEYTKDLQVASDYPKIDFELIRTHLKEWKHH KEENIMTYRDKSFSSPVTGTVAPLHHTPWVEAMDDSMTTFMKAKSS
Sequences:
>Translated_446_residues MTKVAIIGSGPCGLSILRSFQQAEEKGQIIPELVCFEKQSNWGGLWNYSWRTGSDQYGDPVHNSMYRYLWSNGPKECLEF ADYSFDEHFQQPIPSFPPREVLYDYILGRAKKSNLKKYIKFNTVVNNVVFNDDQFVITSLNKKENSISQENFDYLVVATG HFSVPYVPEYEGMNSFPGRILHSHDFRDAEEFRNKDVVVLGSSYSAEDIALQCYKYGAKSVTIGYRNNPIGFEWPEGMKE VHYLDKLEGNKATFKDGHTQNVDALILCSGYLHHFPFLEESLKLKTHNRLYPPKLYKGVVWQDNHKLFYLGMQDQFYTFN MFDCQAWYARDVIMGKTQVPDDAEIEKDINNWVVKEEALEDSIQMIDFQTEYTKDLQVASDYPKIDFELIRTHLKEWKHH KEENIMTYRDKSFSSPVTGTVAPLHHTPWVEAMDDSMTTFMKAKSS >Mature_445_residues TKVAIIGSGPCGLSILRSFQQAEEKGQIIPELVCFEKQSNWGGLWNYSWRTGSDQYGDPVHNSMYRYLWSNGPKECLEFA DYSFDEHFQQPIPSFPPREVLYDYILGRAKKSNLKKYIKFNTVVNNVVFNDDQFVITSLNKKENSISQENFDYLVVATGH FSVPYVPEYEGMNSFPGRILHSHDFRDAEEFRNKDVVVLGSSYSAEDIALQCYKYGAKSVTIGYRNNPIGFEWPEGMKEV HYLDKLEGNKATFKDGHTQNVDALILCSGYLHHFPFLEESLKLKTHNRLYPPKLYKGVVWQDNHKLFYLGMQDQFYTFNM FDCQAWYARDVIMGKTQVPDDAEIEKDINNWVVKEEALEDSIQMIDFQTEYTKDLQVASDYPKIDFELIRTHLKEWKHHK EENIMTYRDKSFSSPVTGTVAPLHHTPWVEAMDDSMTTFMKAKSS
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4503759, Length=225, Percent_Identity=32.4444444444444, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI50541965, Length=235, Percent_Identity=34.0425531914894, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI50541961, Length=235, Percent_Identity=34.0425531914894, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI4503755, Length=226, Percent_Identity=29.646017699115, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI4503757, Length=225, Percent_Identity=32, Blast_Score=93, Evalue=5e-19, Organism=Homo sapiens, GI221316672, Length=235, Percent_Identity=30.6382978723404, Blast_Score=89, Evalue=7e-18, Organism=Homo sapiens, GI221316674, Length=235, Percent_Identity=30.6382978723404, Blast_Score=89, Evalue=9e-18, Organism=Homo sapiens, GI221316678, Length=235, Percent_Identity=30.6382978723404, Blast_Score=88, Evalue=1e-17, Organism=Caenorhabditis elegans, GI193202226, Length=348, Percent_Identity=31.3218390804598, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17506045, Length=313, Percent_Identity=29.3929712460064, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI25145785, Length=226, Percent_Identity=32.7433628318584, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17555726, Length=233, Percent_Identity=27.8969957081545, Blast_Score=89, Evalue=5e-18, Organism=Caenorhabditis elegans, GI25150462, Length=230, Percent_Identity=27.3913043478261, Blast_Score=86, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17541300, Length=217, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17561948, Length=242, Percent_Identity=25.2066115702479, Blast_Score=84, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6321970, Length=265, Percent_Identity=30.5660377358491, Blast_Score=99, Evalue=1e-21, Organism=Drosophila melanogaster, GI19922866, Length=422, Percent_Identity=28.9099526066351, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI19921694, Length=348, Percent_Identity=25, Blast_Score=131, Evalue=9e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51843; Mature: 51712
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKVAIIGSGPCGLSILRSFQQAEEKGQIIPELVCFEKQSNWGGLWNYSWRTGSDQYGDP CCEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCCCCCEEECCCCCCCCCCCCH VHNSMYRYLWSNGPKECLEFADYSFDEHFQQPIPSFPPREVLYDYILGRAKKSNLKKYIK HHHHHHHHHHCCCHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH FNTVVNNVVFNDDQFVITSLNKKENSISQENFDYLVVATGHFSVPYVPEYEGMNSFPGRI HHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC LHSHDFRDAEEFRNKDVVVLGSSYSAEDIALQCYKYGAKSVTIGYRNNPIGFEWPEGMKE CCCCCCCCHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHH VHYLDKLEGNKATFKDGHTQNVDALILCSGYLHHFPFLEESLKLKTHNRLYPPKLYKGVV HHHHHHCCCCCCCCCCCCCCCCCEEEEECHHHHHCCCHHHHHHHHHCCCCCCHHHHCCCE WQDNHKLFYLGMQDQFYTFNMFDCQAWYARDVIMGKTQVPDDAEIEKDINNWVVKEEALE EECCCEEEEEECCCCEEEEEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEHHHHHH DSIQMIDFQTEYTKDLQVASDYPKIDFELIRTHLKEWKHHKEENIMTYRDKSFSSPVTGT HHHHEEECCHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCC VAPLHHTPWVEAMDDSMTTFMKAKSS CCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TKVAIIGSGPCGLSILRSFQQAEEKGQIIPELVCFEKQSNWGGLWNYSWRTGSDQYGDP CEEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCCCCCEEECCCCCCCCCCCCH VHNSMYRYLWSNGPKECLEFADYSFDEHFQQPIPSFPPREVLYDYILGRAKKSNLKKYIK HHHHHHHHHHCCCHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH FNTVVNNVVFNDDQFVITSLNKKENSISQENFDYLVVATGHFSVPYVPEYEGMNSFPGRI HHHHHHHEEECCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC LHSHDFRDAEEFRNKDVVVLGSSYSAEDIALQCYKYGAKSVTIGYRNNPIGFEWPEGMKE CCCCCCCCHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHH VHYLDKLEGNKATFKDGHTQNVDALILCSGYLHHFPFLEESLKLKTHNRLYPPKLYKGVV HHHHHHCCCCCCCCCCCCCCCCCEEEEECHHHHHCCCHHHHHHHHHCCCCCCHHHHCCCE WQDNHKLFYLGMQDQFYTFNMFDCQAWYARDVIMGKTQVPDDAEIEKDINNWVVKEEALE EECCCEEEEEECCCCEEEEEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEHHHHHH DSIQMIDFQTEYTKDLQVASDYPKIDFELIRTHLKEWKHHKEENIMTYRDKSFSSPVTGT HHHHEEECCHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCC VAPLHHTPWVEAMDDSMTTFMKAKSS CCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA