Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474374

Identifier: 113474374

GI number: 113474374

Start: 810031

End: 810729

Strand: Direct

Name: 113474374

Synonym: Tery_0507

Alternate gene names: NA

Gene position: 810031-810729 (Clockwise)

Preceding gene: 113474373

Following gene: 113474375

Centisome position: 10.45

GC content: 35.48

Gene sequence:

>699_bases
ATGTCAAAAATTGCTTATAAAATTGAACATTCTCCAGCTTATGCTTCATTAATTATTGATTTGCACTCGCAGCAAAAAGT
ATTAGTAGAAGCCTCAGCTATGGCTGCCATGGATACCTCAATAAAAATGAAATCTAAAATCAAAGGTGGCTTAATGAAAG
GAGTCGGTAGGATGTTGGGGGGTGAATCCTTATTTATTAATGAATTTAGCACTCAAAACCAGTCAGGAAGATTGTATATT
TCCCCTGGTGTTCCTGGAGATATTCAACATTATTATATCGAGAATGGTTGTGGTTTATTCGTTCAATCATCAGGATTTGT
TGCCTGTAGTGAGACCGTAGAAGTAGATACTCAATTTCAAGGATTTAAAGGCTTTTTTAGTGGAGAATCTTTGTTTTTAT
TAAGAGCTACTGGAAGGGGGGATTTTTGGTTTAGTTCCTATGGAGGTATTTTAGAAATTCCTGTGGAAGAAAGTTATGTG
GTAGATACTGGTTATATTGTGGCTTTTGAAGATACCCTAAATTATAATGTTGAAATGATTGGAGGTTTATCATTTAAAGG
TTTAAAAACAGGAATTTTAGGGGGTGAAGGATTAGTTTGTAGGTTTAGTGGCCAAGGCAGTTTATGGATTCAAAGCCGCG
GGATTTATCCTCTATTAAATTTTTTAAATCCTTTCCGTCCTACCAAGGGTAGTGATTGA

Upstream 100 bases:

>100_bases
TTTGTGTCAATCAGAAAATACTCATTCCTAAATATATTTCTCTCTTCTCTATTATCTGTTTTAAACTTTAGTATTTATCC
ATAAACTAGGATGAGTATAT

Downstream 100 bases:

>100_bases
GGTTTTTCGGATTAATTATTAATTAAACTTATGAGCAATCGCAATCCTTCACCAACTAATCGTCAACTTTTAATTATATT
AGGAATTTGGACGGGGATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MSKIAYKIEHSPAYASLIIDLHSQQKVLVEASAMAAMDTSIKMKSKIKGGLMKGVGRMLGGESLFINEFSTQNQSGRLYI
SPGVPGDIQHYYIENGCGLFVQSSGFVACSETVEVDTQFQGFKGFFSGESLFLLRATGRGDFWFSSYGGILEIPVEESYV
VDTGYIVAFEDTLNYNVEMIGGLSFKGLKTGILGGEGLVCRFSGQGSLWIQSRGIYPLLNFLNPFRPTKGSD

Sequences:

>Translated_232_residues
MSKIAYKIEHSPAYASLIIDLHSQQKVLVEASAMAAMDTSIKMKSKIKGGLMKGVGRMLGGESLFINEFSTQNQSGRLYI
SPGVPGDIQHYYIENGCGLFVQSSGFVACSETVEVDTQFQGFKGFFSGESLFLLRATGRGDFWFSSYGGILEIPVEESYV
VDTGYIVAFEDTLNYNVEMIGGLSFKGLKTGILGGEGLVCRFSGQGSLWIQSRGIYPLLNFLNPFRPTKGSD
>Mature_231_residues
SKIAYKIEHSPAYASLIIDLHSQQKVLVEASAMAAMDTSIKMKSKIKGGLMKGVGRMLGGESLFINEFSTQNQSGRLYIS
PGVPGDIQHYYIENGCGLFVQSSGFVACSETVEVDTQFQGFKGFFSGESLFLLRATGRGDFWFSSYGGILEIPVEESYVV
DTGYIVAFEDTLNYNVEMIGGLSFKGLKTGILGGEGLVCRFSGQGSLWIQSRGIYPLLNFLNPFRPTKGSD

Specific function: Unknown

COG id: COG2013

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002838
- InterPro:   IPR016031 [H]

Pfam domain/function: PF01987 DUF124 [H]

EC number: NA

Molecular weight: Translated: 25303; Mature: 25172

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIAYKIEHSPAYASLIIDLHSQQKVLVEASAMAAMDTSIKMKSKIKGGLMKGVGRMLG
CCCEEEEEECCCCEEEEEEEECCCCEEEEEEHHHHHHCCCEEEHHHHCCHHHHHHHHHHC
GESLFINEFSTQNQSGRLYISPGVPGDIQHYYIENGCGLFVQSSGFVACSETVEVDTQFQ
CCEEEEEECCCCCCCCEEEECCCCCCCCEEEEEECCCEEEEECCCCEEECCEEEECCCCC
GFKGFFSGESLFLLRATGRGDFWFSSYGGILEIPVEESYVVDTGYIVAFEDTLNYNVEMI
CCEEEECCCEEEEEEECCCCCEEEECCCCEEEECCCCCEEEECCEEEEEECCCCCCEEEE
GGLSFKGLKTGILGGEGLVCRFSGQGSLWIQSRGIYPLLNFLNPFRPTKGSD
ECEEECCEEEEECCCCCEEEEECCCCEEEEEECCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SKIAYKIEHSPAYASLIIDLHSQQKVLVEASAMAAMDTSIKMKSKIKGGLMKGVGRMLG
CCEEEEEECCCCEEEEEEEECCCCEEEEEEHHHHHHCCCEEEHHHHCCHHHHHHHHHHC
GESLFINEFSTQNQSGRLYISPGVPGDIQHYYIENGCGLFVQSSGFVACSETVEVDTQFQ
CCEEEEEECCCCCCCCEEEECCCCCCCCEEEEEECCCEEEEECCCCEEECCEEEECCCCC
GFKGFFSGESLFLLRATGRGDFWFSSYGGILEIPVEESYVVDTGYIVAFEDTLNYNVEMI
CCEEEECCCEEEEEEECCCCCEEEECCCCEEEECCCCCEEEECCEEEEEECCCCCCEEEE
GGLSFKGLKTGILGGEGLVCRFSGQGSLWIQSRGIYPLLNFLNPFRPTKGSD
ECEEECCEEEEECCCCCEEEEECCCCEEEEEECCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA