Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474362

Identifier: 113474362

GI number: 113474362

Start: 791975

End: 793528

Strand: Direct

Name: 113474362

Synonym: Tery_0494

Alternate gene names: NA

Gene position: 791975-793528 (Clockwise)

Preceding gene: 113474361

Following gene: 113474364

Centisome position: 10.22

GC content: 36.04

Gene sequence:

>1554_bases
ATGTCTTTAACAGAAAAAATTCTCGACCAAATTCCAGGAAACCCTTTAGAAGGTCTGCGACGAGTCGATCAGATTTGGCA
AAAACTTCGTTCAGAAAGTATAATTATTCCTAGTACTATTAGTGAAGAAAATAAACCACTAAAAGAAGATGAATGGGATG
TAGTAATTTGCGGAGGTACTCTTGGTATAATAATTGGTGCTGCTTTGGCAAAAAAAGGTTGGCGGGTTGCACTGTTAGAA
CAAGGTATTCTTAAGGGTAGAAAACAAGAATGGAATATTTCTCGCAAAGAACTAGAAACATTTGTAGAATTAAACCTTGT
ATCTCAAGAAGAACTAGAAAAAGCGATCGCTACGGAATATAACCCTGCTCGAATTAGCTTCCCAAATAGTCCTGAAATAT
GGGTCAAAGATGTCCTCAATATTGGTGTAGATCCAGTTTATCTTTTAGAAACTCTGAAACAATGCTTTTTAGAAGCAGGG
GGTCAACTATTTGAAAATACATCTTATGAAGCAGCAGTAATTCATCCAGATGGGGTAAATATCCAAACTAGCAATGGTAG
ATCATTCAAAACTCGACTACTTCTGGATGCAATGGGTCATTTTTCTCCTATTGTCAAACAAGCAAGGGAAGGCAAAAAAC
CTGATGCTGTTTGTTTAGTGGTTGGTACTTGCGCTACTGGATACCCAAAAAATGATACGGGGGATATTTTTGCCTCGTTT
ACTCCGATCAAAAATCAATGTCAATATTTTTGGGAAGCATTTCCTGCTAGAGATGGACGAACTACTTATCTATTTACTTA
TTTAGATGCTCATCGAGATAGATTTTCTTTGGAATTTTTCTTTGAAGAATATCTACGTCTATTACCTGAATATCAAAAAG
TTGAACTTAGTCAACTTAAATTTCAACGTGCTTTATTTGGTTTTTTTCCTTGTTATCGTCAAAGTCCCTTGAAAACCCCT
TGGAATCGTATTTTGCCAGTGGGTGATAGTAGTGGAAGTCAGTCTCCTCTTAGTTTTGGTGGTTTTGGCTCTATGGTACG
TCATTTGAAACGTCTGATGGTGGGTATTGATGAAGCTTTGCAAACTGAAAATTTGTCTGCAAATGCTCTGGGACTTTTAC
AACCGTATCAACCTAATGTATCAGTTACTTGGCTGTTTCAACGTTCTATGAGTATAGGGGTAAATCAATTTGTTGAACCA
CATCAAATTAATGAATTATTGGCAGGGGTGTTTCAGGTAATGGAAAAATTGGGTGAACCTGTACTGAAACCTTTTTTGCA
AGATGTTGTACAGTTTCCTGCTTTGGCGCAAACTTTATTTGTTACTTCTTTAAAGCAACCAGGTTTAGTAATAAAAATTA
TCCCTCAAGTGGGAATAGGAAATTTGTTAAATTGGATGAAACATTATTTAAATTTGGGAGTATACAGTTTTTTATATCCT
ATTGGGGGAGTTATGGAAGGTTTAACGGCAAAAATGTCAGAAGAACAAAGGTATTATTATAACCGTTGGATTGAACAATG
GAAATATGGTTCAGGAGGAGATTATATTGAGTGA

Upstream 100 bases:

>100_bases
GAAATCATTATAGGATTTTAGGTATATGATTATAATTAACTTATAAATTAATAGATAAAAAAAATCAATAATTACGACAA
AAGTTAATAATAGAAAAGTT

Downstream 100 bases:

>100_bases
CTTATCTACACAAACCTATCCGTTTTCTGTATAGGCTTCTGATGCTTTTTAAGATTTAATGTTGCAGGGTGTTTCATATT
AGTTGAAGATACACCCGCAA

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 517; Mature: 516

Protein sequence:

>517_residues
MSLTEKILDQIPGNPLEGLRRVDQIWQKLRSESIIIPSTISEENKPLKEDEWDVVICGGTLGIIIGAALAKKGWRVALLE
QGILKGRKQEWNISRKELETFVELNLVSQEELEKAIATEYNPARISFPNSPEIWVKDVLNIGVDPVYLLETLKQCFLEAG
GQLFENTSYEAAVIHPDGVNIQTSNGRSFKTRLLLDAMGHFSPIVKQAREGKKPDAVCLVVGTCATGYPKNDTGDIFASF
TPIKNQCQYFWEAFPARDGRTTYLFTYLDAHRDRFSLEFFFEEYLRLLPEYQKVELSQLKFQRALFGFFPCYRQSPLKTP
WNRILPVGDSSGSQSPLSFGGFGSMVRHLKRLMVGIDEALQTENLSANALGLLQPYQPNVSVTWLFQRSMSIGVNQFVEP
HQINELLAGVFQVMEKLGEPVLKPFLQDVVQFPALAQTLFVTSLKQPGLVIKIIPQVGIGNLLNWMKHYLNLGVYSFLYP
IGGVMEGLTAKMSEEQRYYYNRWIEQWKYGSGGDYIE

Sequences:

>Translated_517_residues
MSLTEKILDQIPGNPLEGLRRVDQIWQKLRSESIIIPSTISEENKPLKEDEWDVVICGGTLGIIIGAALAKKGWRVALLE
QGILKGRKQEWNISRKELETFVELNLVSQEELEKAIATEYNPARISFPNSPEIWVKDVLNIGVDPVYLLETLKQCFLEAG
GQLFENTSYEAAVIHPDGVNIQTSNGRSFKTRLLLDAMGHFSPIVKQAREGKKPDAVCLVVGTCATGYPKNDTGDIFASF
TPIKNQCQYFWEAFPARDGRTTYLFTYLDAHRDRFSLEFFFEEYLRLLPEYQKVELSQLKFQRALFGFFPCYRQSPLKTP
WNRILPVGDSSGSQSPLSFGGFGSMVRHLKRLMVGIDEALQTENLSANALGLLQPYQPNVSVTWLFQRSMSIGVNQFVEP
HQINELLAGVFQVMEKLGEPVLKPFLQDVVQFPALAQTLFVTSLKQPGLVIKIIPQVGIGNLLNWMKHYLNLGVYSFLYP
IGGVMEGLTAKMSEEQRYYYNRWIEQWKYGSGGDYIE
>Mature_516_residues
SLTEKILDQIPGNPLEGLRRVDQIWQKLRSESIIIPSTISEENKPLKEDEWDVVICGGTLGIIIGAALAKKGWRVALLEQ
GILKGRKQEWNISRKELETFVELNLVSQEELEKAIATEYNPARISFPNSPEIWVKDVLNIGVDPVYLLETLKQCFLEAGG
QLFENTSYEAAVIHPDGVNIQTSNGRSFKTRLLLDAMGHFSPIVKQAREGKKPDAVCLVVGTCATGYPKNDTGDIFASFT
PIKNQCQYFWEAFPARDGRTTYLFTYLDAHRDRFSLEFFFEEYLRLLPEYQKVELSQLKFQRALFGFFPCYRQSPLKTPW
NRILPVGDSSGSQSPLSFGGFGSMVRHLKRLMVGIDEALQTENLSANALGLLQPYQPNVSVTWLFQRSMSIGVNQFVEPH
QINELLAGVFQVMEKLGEPVLKPFLQDVVQFPALAQTLFVTSLKQPGLVIKIIPQVGIGNLLNWMKHYLNLGVYSFLYPI
GGVMEGLTAKMSEEQRYYYNRWIEQWKYGSGGDYIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58631; Mature: 58500

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTEKILDQIPGNPLEGLRRVDQIWQKLRSESIIIPSTISEENKPLKEDEWDVVICGGT
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEECCH
LGIIIGAALAKKGWRVALLEQGILKGRKQEWNISRKELETFVELNLVSQEELEKAIATEY
HHHHHHHHHHCCCCEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCC
NPARISFPNSPEIWVKDVLNIGVDPVYLLETLKQCFLEAGGQLFENTSYEAAVIHPDGVN
CCCEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCEEEECCCCCE
IQTSNGRSFKTRLLLDAMGHFSPIVKQAREGKKPDAVCLVVGTCATGYPKNDTGDIFASF
EECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEEEEC
TPIKNQCQYFWEAFPARDGRTTYLFTYLDAHRDRFSLEFFFEEYLRLLPEYQKVELSQLK
CCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
FQRALFGFFPCYRQSPLKTPWNRILPVGDSSGSQSPLSFGGFGSMVRHLKRLMVGIDEAL
HHHHHHHHHHHHCCCCCCCCHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
QTENLSANALGLLQPYQPNVSVTWLFQRSMSIGVNQFVEPHQINELLAGVFQVMEKLGEP
HHCCCCCCCEECCCCCCCCCEEEEEEHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHCCH
VLKPFLQDVVQFPALAQTLFVTSLKQPGLVIKIIPQVGIGNLLNWMKHYLNLGVYSFLYP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
IGGVMEGLTAKMSEEQRYYYNRWIEQWKYGSGGDYIE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SLTEKILDQIPGNPLEGLRRVDQIWQKLRSESIIIPSTISEENKPLKEDEWDVVICGGT
CHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEECCH
LGIIIGAALAKKGWRVALLEQGILKGRKQEWNISRKELETFVELNLVSQEELEKAIATEY
HHHHHHHHHHCCCCEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCC
NPARISFPNSPEIWVKDVLNIGVDPVYLLETLKQCFLEAGGQLFENTSYEAAVIHPDGVN
CCCEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCEEEECCCCCE
IQTSNGRSFKTRLLLDAMGHFSPIVKQAREGKKPDAVCLVVGTCATGYPKNDTGDIFASF
EECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCEEEEC
TPIKNQCQYFWEAFPARDGRTTYLFTYLDAHRDRFSLEFFFEEYLRLLPEYQKVELSQLK
CCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
FQRALFGFFPCYRQSPLKTPWNRILPVGDSSGSQSPLSFGGFGSMVRHLKRLMVGIDEAL
HHHHHHHHHHHHCCCCCCCCHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
QTENLSANALGLLQPYQPNVSVTWLFQRSMSIGVNQFVEPHQINELLAGVFQVMEKLGEP
HHCCCCCCCEECCCCCCCCCEEEEEEHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHCCH
VLKPFLQDVVQFPALAQTLFVTSLKQPGLVIKIIPQVGIGNLLNWMKHYLNLGVYSFLYP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
IGGVMEGLTAKMSEEQRYYYNRWIEQWKYGSGGDYIE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA