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The map label for this gene is hdrB2 [H]

Identifier: 113474324

GI number: 113474324

Start: 719131

End: 720036

Strand: Direct

Name: hdrB2 [H]

Synonym: Tery_0453

Alternate gene names: 113474324

Gene position: 719131-720036 (Clockwise)

Preceding gene: 113474317

Following gene: 113474325

Centisome position: 9.28

GC content: 40.07

Gene sequence:

>906_bases
ATGTCTGCTCAAATACTCAAATATGCTTACTTTCCTGGTTGTGTAGCTCAAGGTGCTTGCCGAGAGCTTTATCAGTCTAC
CCAAGTTCTTACCCAAGTCCTGGGAATAGAGCTAGTAGAACTCAAAAAGGCTGCTTGTTGTGGGTCTGGTACTTTTAAAG
AAGACTCTCAACTATTAGAAGATACTGTTAACGCTCGTAACATAGCTTTGGCTGAGGAACTAAATTTACCCTTATTAACC
CATTGTAGCACTTGTCAAGGGGTTATTGGACATGTGGATGAGCGTCTTAAAGAATCCCAACAAACTGAACCAGCTTACTT
AGAACAAATCAATGGCCTCTTACAAAAACAAAGTTGTTCTCCTTATCAAGGCAGTACAGAGGTTAAACATCTACTATGGG
CATTAGTGGCAGATTATGGTCTTAAGGAAATCCAAAGTCGTGTCACTCGTAAGCTCTCCGGCCTCAAATGCGCTGCTTTC
TATGGTTGCTATTTACTTAGAGGTCAAAGTAATTTACTTTATGATGACCCTTATCAACCAGAGTCTATGGAAAATGTGTT
TCGGGCTATTGGAGCTACCCCAATTTATTATCGAGGACGGACTCAATGTTGTGGTTGGCCTCTTTCTAGTTATGCTACTA
ATCAGGCTTTCCAGATGGCCGGAAATCATATTAGTGAAGCTATTGACAAAGGTGCAGATTGTATGGTAACCCCTTGTCCT
TTATGTCACTTAAATTTAGATTCCCGTCAACCAGAAGTAGAGAGAGTGATTGGCCATAAGTTAGGTTTACCAGTATTACA
CTTACCCCAATTAATAGCTTTAGCTTTAGGCATTTCTCCAAAGGAACTAGGATTAGATCGTCATATAGTTTCAACTCGTC
CAGTATTAGAAAAGTTGGAACTTTAA

Upstream 100 bases:

>100_bases
TTATGATAATCATAAACCTATATTATAAATCAATATAGAATAGATTAATATCATTAAAATCATCACATATATTTTAACAG
CTAATTTTTTAGTTAATGTA

Downstream 100 bases:

>100_bases
ATAATTCACTAGTTACTACTAGATAATTGAGATACTTTAAGTTTTTCAACAATGTTTATCAGTGATCAGAACCAGTAAGG
TAAACTAAATCGAGGCATTA

Product: succinate dehydrogenase subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MSAQILKYAYFPGCVAQGACRELYQSTQVLTQVLGIELVELKKAACCGSGTFKEDSQLLEDTVNARNIALAEELNLPLLT
HCSTCQGVIGHVDERLKESQQTEPAYLEQINGLLQKQSCSPYQGSTEVKHLLWALVADYGLKEIQSRVTRKLSGLKCAAF
YGCYLLRGQSNLLYDDPYQPESMENVFRAIGATPIYYRGRTQCCGWPLSSYATNQAFQMAGNHISEAIDKGADCMVTPCP
LCHLNLDSRQPEVERVIGHKLGLPVLHLPQLIALALGISPKELGLDRHIVSTRPVLEKLEL

Sequences:

>Translated_301_residues
MSAQILKYAYFPGCVAQGACRELYQSTQVLTQVLGIELVELKKAACCGSGTFKEDSQLLEDTVNARNIALAEELNLPLLT
HCSTCQGVIGHVDERLKESQQTEPAYLEQINGLLQKQSCSPYQGSTEVKHLLWALVADYGLKEIQSRVTRKLSGLKCAAF
YGCYLLRGQSNLLYDDPYQPESMENVFRAIGATPIYYRGRTQCCGWPLSSYATNQAFQMAGNHISEAIDKGADCMVTPCP
LCHLNLDSRQPEVERVIGHKLGLPVLHLPQLIALALGISPKELGLDRHIVSTRPVLEKLEL
>Mature_300_residues
SAQILKYAYFPGCVAQGACRELYQSTQVLTQVLGIELVELKKAACCGSGTFKEDSQLLEDTVNARNIALAEELNLPLLTH
CSTCQGVIGHVDERLKESQQTEPAYLEQINGLLQKQSCSPYQGSTEVKHLLWALVADYGLKEIQSRVTRKLSGLKCAAFY
GCYLLRGQSNLLYDDPYQPESMENVFRAIGATPIYYRGRTQCCGWPLSSYATNQAFQMAGNHISEAIDKGADCMVTPCPL
CHLNLDSRQPEVERVIGHKLGLPVLHLPQLIALALGISPKELGLDRHIVSTRPVLEKLEL

Specific function: Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B). HdrB may have a function in energy transduction [H]

COG id: COG2048

COG function: function code C; Heterodisulfide reductase, subunit B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hdrB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017678
- InterPro:   IPR004017 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: =1.8.98.1 [H]

Molecular weight: Translated: 33271; Mature: 33140

Theoretical pI: Translated: 6.49; Mature: 6.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQILKYAYFPGCVAQGACRELYQSTQVLTQVLGIELVELKKAACCGSGTFKEDSQLLE
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
DTVNARNIALAEELNLPLLTHCSTCQGVIGHVDERLKESQQTEPAYLEQINGLLQKQSCS
HHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
PYQGSTEVKHLLWALVADYGLKEIQSRVTRKLSGLKCAAFYGCYLLRGQSNLLYDDPYQP
CCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCCCCCC
ESMENVFRAIGATPIYYRGRTQCCGWPLSSYATNQAFQMAGNHISEAIDKGADCMVTPCP
HHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC
LCHLNLDSRQPEVERVIGHKLGLPVLHLPQLIALALGISPKELGLDRHIVSTRPVLEKLE
EEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHC
L
C
>Mature Secondary Structure 
SAQILKYAYFPGCVAQGACRELYQSTQVLTQVLGIELVELKKAACCGSGTFKEDSQLLE
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
DTVNARNIALAEELNLPLLTHCSTCQGVIGHVDERLKESQQTEPAYLEQINGLLQKQSCS
HHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
PYQGSTEVKHLLWALVADYGLKEIQSRVTRKLSGLKCAAFYGCYLLRGQSNLLYDDPYQP
CCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCCCCCC
ESMENVFRAIGATPIYYRGRTQCCGWPLSSYATNQAFQMAGNHISEAIDKGADCMVTPCP
HHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCC
LCHLNLDSRQPEVERVIGHKLGLPVLHLPQLIALALGISPKELGLDRHIVSTRPVLEKLE
EEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]