Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474310

Identifier: 113474310

GI number: 113474310

Start: 691235

End: 691768

Strand: Direct

Name: 113474310

Synonym: Tery_0439

Alternate gene names: NA

Gene position: 691235-691768 (Clockwise)

Preceding gene: 113474309

Following gene: 113474312

Centisome position: 8.92

GC content: 31.27

Gene sequence:

>534_bases
ATGATTGATGAATGTCATCTTCTATGGGGAGACATATTAGGTTATGCTTGGGGAAAAACAGATGAAAGAATAGAAATTGC
AATTAAAAATGAAAAAGAAAGACAGACTTATTATGGAGCTTTAGACTATAAAACCAAGGAATTTCTTGTGCAAGAATATG
AGAGTGGAAATACTAAAAATACTATTGAATTTATTAAATATTTGCAGAAGCAAAGACCGGGCAACAAATTGGCAATATTT
TGGGATGGGGCAACTTACCATAACTCTCAAGAATTTCGAGAATATTTAATGACAATTAATCAATACTTATCAGAAGAAGA
ATTGTTGATAAATTGTACAAGATTTGCTCCCAATGCTCCGGAGCAAAATCCTGTTGAAGATATTTGGTTACAAACCAAAA
ATTTCAGTATTACTTTTTATCATCTTTGCAGTTCTTTTAAAGTAGTTAAGTGGCTATTTAAGTTTTTTGCGGATGGTCAA
ATATTCAATTTCCCAAAACTTTTTCAGTATGAAATTTTGCCGCAACCTACTTAG

Upstream 100 bases:

>100_bases
TGCTAAAAATGATTAATTAGTAGAAGTTAAAAGAAAAGAAATAGAGGAATTTTTAGCTAAATGGCAACCAGAAATAGAAA
CTGGAAAGCTTACAGTGTTT

Downstream 100 bases:

>100_bases
GATTGCTATAGTTCATATCAGACGAAATTTATAAGGCATAAAACCATGATGTTCAGCTTTTCAAATTACATAATTGCAAA
AAAAAATAATTAACTGAACC

Product: transposase

Products: NA

Alternate protein names: Transposase Of

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MIDECHLLWGDILGYAWGKTDERIEIAIKNEKERQTYYGALDYKTKEFLVQEYESGNTKNTIEFIKYLQKQRPGNKLAIF
WDGATYHNSQEFREYLMTINQYLSEEELLINCTRFAPNAPEQNPVEDIWLQTKNFSITFYHLCSSFKVVKWLFKFFADGQ
IFNFPKLFQYEILPQPT

Sequences:

>Translated_177_residues
MIDECHLLWGDILGYAWGKTDERIEIAIKNEKERQTYYGALDYKTKEFLVQEYESGNTKNTIEFIKYLQKQRPGNKLAIF
WDGATYHNSQEFREYLMTINQYLSEEELLINCTRFAPNAPEQNPVEDIWLQTKNFSITFYHLCSSFKVVKWLFKFFADGQ
IFNFPKLFQYEILPQPT
>Mature_177_residues
MIDECHLLWGDILGYAWGKTDERIEIAIKNEKERQTYYGALDYKTKEFLVQEYESGNTKNTIEFIKYLQKQRPGNKLAIF
WDGATYHNSQEFREYLMTINQYLSEEELLINCTRFAPNAPEQNPVEDIWLQTKNFSITFYHLCSSFKVVKWLFKFFADGQ
IFNFPKLFQYEILPQPT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21159; Mature: 21159

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDECHLLWGDILGYAWGKTDERIEIAIKNEKERQTYYGALDYKTKEFLVQEYESGNTKN
CCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHEEEECCCCHHHHHHHHHCCCCCCH
TIEFIKYLQKQRPGNKLAIFWDGATYHNSQEFREYLMTINQYLSEEELLINCTRFAPNAP
HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCC
EQNPVEDIWLQTKNFSITFYHLCSSFKVVKWLFKFFADGQIFNFPKLFQYEILPQPT
CCCCHHHHEEECCCCCEEHHHHHCHHHHHHHHHHHHCCCCEECCCCCEEEECCCCCC
>Mature Secondary Structure
MIDECHLLWGDILGYAWGKTDERIEIAIKNEKERQTYYGALDYKTKEFLVQEYESGNTKN
CCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHEEEECCCCHHHHHHHHHCCCCCCH
TIEFIKYLQKQRPGNKLAIFWDGATYHNSQEFREYLMTINQYLSEEELLINCTRFAPNAP
HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCC
EQNPVEDIWLQTKNFSITFYHLCSSFKVVKWLFKFFADGQIFNFPKLFQYEILPQPT
CCCCHHHHEEECCCCCEEHHHHHCHHHHHHHHHHHHCCCCEECCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA