Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474290

Identifier: 113474290

GI number: 113474290

Start: 650769

End: 652265

Strand: Reverse

Name: 113474290

Synonym: Tery_0415

Alternate gene names: NA

Gene position: 652265-650769 (Counterclockwise)

Preceding gene: 113474296

Following gene: 113474289

Centisome position: 8.42

GC content: 32.53

Gene sequence:

>1497_bases
ATGATGCTTTTGCCACCACTTATTGTGAGCAGGATAATAATTCTAGCAACTTTAATTTTCTTTATCTGTAGTAGTTTACG
TCACGCCTTCTTTTGCTCTACTGGGTTTGACTTGGGTATTTATGACCAAGTTGTATATTTGATTAGTCAAGGAAAATCTC
CCATTTCTTCTTTTTTGGGATATCACCATTTGGGAAATCATGCTGCTTGGGCTGTCTATCCTTTAGGATTATTTTATATG
ATTCATCCTGATATTCATTGGCTACTCTTACTACAAGCTGTATGTTTAGCCTTAGGAAGTTGGCCTACTTGGTGTTTGGC
CAGATTAGCAGGGTTAAATCAAGGACAAGCAGTAGCGATCGCCATTTCCTATCTTTTATACCCAGTAATTTTTAATATTA
ATTTATTTGATTTTCACCCAGAAGTAATGGCTTTACCTGCTATTTTAGGAGCAATTTTAGCAGCGAGACTAAAACGTGTT
TTATGGTTTTGTATAGCTATTATTTGGGTATTAGGTTGTAAAGCAGTTTTATCATTAACTATAGTTTTTATGGGTTTCTG
GTTACTCGCTTTTGAAAAACGTAAGTTTTGCGGTTTAATTGCTATTTTTTTAGGCATTTTATGGTTTATAGTTGTAACTC
AAGGAATTATTCCTTTTTTCAGTGGTAAAGAAGTAGCTGGAGTCGGGCGTTATAGTTATCTGGGAGATTCTGTTGTGGGA
ATTATAATTAATATTTTCCTACAACCAGGAGTAGTGTTAGGCAGAATATTATCTTGGGAAAGTATCAAATATATTTTTCT
GTTATTTTTACCTGTAATTTGGGGAATATTTCCATTACTTCAGACAAATAAGGCTGTTTTACCTAATCTTATCCCTCTCA
TTCCAACTATTCCGACAATTATCTTGAATGCTCTGTCTGAAGTATCATTTCAGAAAAGCTTAAATTATCAGTATTCTTTA
CCTGCAATTAGTTTTTTATTATTAACAATAATTTCCTGTCTAGCAGCAGCTTCTGAAATAGAAAATCAAAGTATTCAGAT
AAAATCAACTTGGATAATTAAGTTAGAAATTCCTAAATTTAATCTGAGATTACCAATACCAAATTTTCAATACCCCCGCA
TAATTATTTTGTGGTCTACTTTAATATTTCTGTTGTTTGGTAATGTAGCCAGTTTATTTTCTTATCCTCGTAGCTTTGAT
ACTTGGCAAGCTACCAATAATGCAATTACTTACATTAAAACTCAAGGTGGGGTACTCACAGATAATCGATTAGCACCTCA
TTTTACTCATCGTTCAATGGTCAAGTTATTGAATCAAATAGAGCCAGATAATTTAGATGAATTCGATTATGTAGTTTTGA
ATTTACGTCATCCCTGGCCAGATACTAAGGATACTGGTATTATCCTTTCTAAAAATCTCCAAAACAACCAAGAATGGGAA
TTAAGTTATCAAAAAAATGATGTAATAGTATTTCAAAGAAAAGAATTCAAAAGTTAA

Upstream 100 bases:

>100_bases
ATAATTGATAAAGTATAAATACTTATAGAGTCGCCAGTTTTTGTACTTTGTGCTACTTTTTCTGTTACAAATTGACTTGG
GGAACGTGGGACTTAAAAAT

Downstream 100 bases:

>100_bases
AAGTTAAAATTTAAAATTTAAAATTTAAAATTTATCTTTGAAAAAAAACAAGGCTGCTAAAAAAATAGTTTTTAGTATGC
CTTAATTCCTAAGATATATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 498; Mature: 498

Protein sequence:

>498_residues
MMLLPPLIVSRIIILATLIFFICSSLRHAFFCSTGFDLGIYDQVVYLISQGKSPISSFLGYHHLGNHAAWAVYPLGLFYM
IHPDIHWLLLLQAVCLALGSWPTWCLARLAGLNQGQAVAIAISYLLYPVIFNINLFDFHPEVMALPAILGAILAARLKRV
LWFCIAIIWVLGCKAVLSLTIVFMGFWLLAFEKRKFCGLIAIFLGILWFIVVTQGIIPFFSGKEVAGVGRYSYLGDSVVG
IIINIFLQPGVVLGRILSWESIKYIFLLFLPVIWGIFPLLQTNKAVLPNLIPLIPTIPTIILNALSEVSFQKSLNYQYSL
PAISFLLLTIISCLAAASEIENQSIQIKSTWIIKLEIPKFNLRLPIPNFQYPRIIILWSTLIFLLFGNVASLFSYPRSFD
TWQATNNAITYIKTQGGVLTDNRLAPHFTHRSMVKLLNQIEPDNLDEFDYVVLNLRHPWPDTKDTGIILSKNLQNNQEWE
LSYQKNDVIVFQRKEFKS

Sequences:

>Translated_498_residues
MMLLPPLIVSRIIILATLIFFICSSLRHAFFCSTGFDLGIYDQVVYLISQGKSPISSFLGYHHLGNHAAWAVYPLGLFYM
IHPDIHWLLLLQAVCLALGSWPTWCLARLAGLNQGQAVAIAISYLLYPVIFNINLFDFHPEVMALPAILGAILAARLKRV
LWFCIAIIWVLGCKAVLSLTIVFMGFWLLAFEKRKFCGLIAIFLGILWFIVVTQGIIPFFSGKEVAGVGRYSYLGDSVVG
IIINIFLQPGVVLGRILSWESIKYIFLLFLPVIWGIFPLLQTNKAVLPNLIPLIPTIPTIILNALSEVSFQKSLNYQYSL
PAISFLLLTIISCLAAASEIENQSIQIKSTWIIKLEIPKFNLRLPIPNFQYPRIIILWSTLIFLLFGNVASLFSYPRSFD
TWQATNNAITYIKTQGGVLTDNRLAPHFTHRSMVKLLNQIEPDNLDEFDYVVLNLRHPWPDTKDTGIILSKNLQNNQEWE
LSYQKNDVIVFQRKEFKS
>Mature_498_residues
MMLLPPLIVSRIIILATLIFFICSSLRHAFFCSTGFDLGIYDQVVYLISQGKSPISSFLGYHHLGNHAAWAVYPLGLFYM
IHPDIHWLLLLQAVCLALGSWPTWCLARLAGLNQGQAVAIAISYLLYPVIFNINLFDFHPEVMALPAILGAILAARLKRV
LWFCIAIIWVLGCKAVLSLTIVFMGFWLLAFEKRKFCGLIAIFLGILWFIVVTQGIIPFFSGKEVAGVGRYSYLGDSVVG
IIINIFLQPGVVLGRILSWESIKYIFLLFLPVIWGIFPLLQTNKAVLPNLIPLIPTIPTIILNALSEVSFQKSLNYQYSL
PAISFLLLTIISCLAAASEIENQSIQIKSTWIIKLEIPKFNLRLPIPNFQYPRIIILWSTLIFLLFGNVASLFSYPRSFD
TWQATNNAITYIKTQGGVLTDNRLAPHFTHRSMVKLLNQIEPDNLDEFDYVVLNLRHPWPDTKDTGIILSKNLQNNQEWE
LSYQKNDVIVFQRKEFKS

Specific function: Unknown

COG id: COG3463

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56456; Mature: 56456

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLLPPLIVSRIIILATLIFFICSSLRHAFFCSTGFDLGIYDQVVYLISQGKSPISSFLG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCHHHHHHH
YHHLGNHAAWAVYPLGLFYMIHPDIHWLLLLQAVCLALGSWPTWCLARLAGLNQGQAVAI
HHHCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHH
AISYLLYPVIFNINLFDFHPEVMALPAILGAILAARLKRVLWFCIAIIWVLGCKAVLSLT
HHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVFMGFWLLAFEKRKFCGLIAIFLGILWFIVVTQGIIPFFSGKEVAGVGRYSYLGDSVVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
IIINIFLQPGVVLGRILSWESIKYIFLLFLPVIWGIFPLLQTNKAVLPNLIPLIPTIPTI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ILNALSEVSFQKSLNYQYSLPAISFLLLTIISCLAAASEIENQSIQIKSTWIIKLEIPKF
HHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCE
NLRLPIPNFQYPRIIILWSTLIFLLFGNVASLFSYPRSFDTWQATNNAITYIKTQGGVLT
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEE
DNRLAPHFTHRSMVKLLNQIEPDNLDEFDYVVLNLRHPWPDTKDTGIILSKNLQNNQEWE
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCEE
LSYQKNDVIVFQRKEFKS
EEECCCCEEEEECCCCCC
>Mature Secondary Structure
MMLLPPLIVSRIIILATLIFFICSSLRHAFFCSTGFDLGIYDQVVYLISQGKSPISSFLG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCHHHHHHH
YHHLGNHAAWAVYPLGLFYMIHPDIHWLLLLQAVCLALGSWPTWCLARLAGLNQGQAVAI
HHHCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHH
AISYLLYPVIFNINLFDFHPEVMALPAILGAILAARLKRVLWFCIAIIWVLGCKAVLSLT
HHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVFMGFWLLAFEKRKFCGLIAIFLGILWFIVVTQGIIPFFSGKEVAGVGRYSYLGDSVVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
IIINIFLQPGVVLGRILSWESIKYIFLLFLPVIWGIFPLLQTNKAVLPNLIPLIPTIPTI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
ILNALSEVSFQKSLNYQYSLPAISFLLLTIISCLAAASEIENQSIQIKSTWIIKLEIPKF
HHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCE
NLRLPIPNFQYPRIIILWSTLIFLLFGNVASLFSYPRSFDTWQATNNAITYIKTQGGVLT
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEE
DNRLAPHFTHRSMVKLLNQIEPDNLDEFDYVVLNLRHPWPDTKDTGIILSKNLQNNQEWE
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCEE
LSYQKNDVIVFQRKEFKS
EEECCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA