Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is mgtA [H]
Identifier: 113474277
GI number: 113474277
Start: 622277
End: 623410
Strand: Direct
Name: mgtA [H]
Synonym: Tery_0399
Alternate gene names: 113474277
Gene position: 622277-623410 (Clockwise)
Preceding gene: 113474276
Following gene: 113474278
Centisome position: 8.03
GC content: 40.12
Gene sequence:
>1134_bases ATGAAGATAGCTCTATTTACCGAAACCTTTTTACCCAAAATAGATGGTATAGTTACGCGTCTATGTCATACTGTCGAGAA TCTACAACGTTTTGGCGATCGAGTCCTAATATTTTCTCCCGCAGGAGGGCTAAAAGAATATCAGGGATCACCAATTTGTG GCATTGAAGGTTTTCCTCTACCCCTATACCCAGAATTAAAATTAGCTATACCAACTCCCACTATTGGAGAAAAACTAGAA CAGTTTCAGCCAGACATAATTCACGTTGCTAATCCTGCAGTATTAGGATTGGGTGGGTTATTCTATGCCAAAAAACTAAA TATTCCACTTGTCGCATCGTACCATACCCACTTACCTCAATACTTACATCACTATGGTTTAGGAATGCTTGAAGGCTTAC TTTGGGAATTACTTAAATCCGGTCATAATCAAGCAGACCTCAATCTTTGTACCTCTACAGTAATGGTAGAAGAATTGAGA AACCATGGCATTGAGAGAGTAGATTTATGGCAGCGGGGAGTTGATACAGAATTATTTCAGCCCCATTATGCAAATCTTGA AATGCGCAATTACCTTAGTCAAGGTAAACCTAATAATAAGATTATACTATATGTTGGGCGATTAGGGGTAGAAAAAGAAA TTGATCGTATTAAACCAATCGTAGAAGCTATCCCCAATACTTGCATAGCTATTGTAGGTGATGGCCCTAACCGACAAAAC CTAGAACAATATTTTGCTAACACCCCCACACATTTTGTAGGCTATTTGCGGGGCCAAAAACTTGCCTCTGCTTATGCTTC TGCCGATGCTTTCATATTTCCCTCTCGCACGGAAACTTTAGGATTGGTACTTTTAGAAGCAATGGCTGCAGGCACCCCAG TAGTGGCGGCCAATTCAGGAGGTATTCCTGATATTGTTACTAATGGAATAAATGGTTATTTATTCGATCCAGATGATGAG AAAGGAGCCATTACAGCTACTCAAAAACTTTTTGCCCACTCAGAAGAACGAGAAACCTTGCGCAAAAATGCTAGAGCTGA AGCGGAACGTTGGGGATGGTCAGCAGCAACTCAGCAATTAAGAAACTATTATCAAAAAATTATCTCTGCCCATTCCATAG CATTAGCTGCATAA
Upstream 100 bases:
>100_bases TTCACCACACTCTACTTAAACCTATTGCTAAATCAAAAAATTAATGAATTAATATTTTTTATAGTATTTTTCCAGCCAAT AAATTTATACTTATTAATCT
Downstream 100 bases:
>100_bases TGGGACTTACACAACATTAGGCTTATAATGCTTGAAAGACAAGGATTATAGCTCAAGGACGTTTTGACTCTAGTGTGCAA GTATCTATACTTTTATCCAG
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Guanosine diphosphomannose-dependent alpha-mannosyltransferase [H]
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MKIALFTETFLPKIDGIVTRLCHTVENLQRFGDRVLIFSPAGGLKEYQGSPICGIEGFPLPLYPELKLAIPTPTIGEKLE QFQPDIIHVANPAVLGLGGLFYAKKLNIPLVASYHTHLPQYLHHYGLGMLEGLLWELLKSGHNQADLNLCTSTVMVEELR NHGIERVDLWQRGVDTELFQPHYANLEMRNYLSQGKPNNKIILYVGRLGVEKEIDRIKPIVEAIPNTCIAIVGDGPNRQN LEQYFANTPTHFVGYLRGQKLASAYASADAFIFPSRTETLGLVLLEAMAAGTPVVAANSGGIPDIVTNGINGYLFDPDDE KGAITATQKLFAHSEERETLRKNARAEAERWGWSAATQQLRNYYQKIISAHSIALAA
Sequences:
>Translated_377_residues MKIALFTETFLPKIDGIVTRLCHTVENLQRFGDRVLIFSPAGGLKEYQGSPICGIEGFPLPLYPELKLAIPTPTIGEKLE QFQPDIIHVANPAVLGLGGLFYAKKLNIPLVASYHTHLPQYLHHYGLGMLEGLLWELLKSGHNQADLNLCTSTVMVEELR NHGIERVDLWQRGVDTELFQPHYANLEMRNYLSQGKPNNKIILYVGRLGVEKEIDRIKPIVEAIPNTCIAIVGDGPNRQN LEQYFANTPTHFVGYLRGQKLASAYASADAFIFPSRTETLGLVLLEAMAAGTPVVAANSGGIPDIVTNGINGYLFDPDDE KGAITATQKLFAHSEERETLRKNARAEAERWGWSAATQQLRNYYQKIISAHSIALAA >Mature_377_residues MKIALFTETFLPKIDGIVTRLCHTVENLQRFGDRVLIFSPAGGLKEYQGSPICGIEGFPLPLYPELKLAIPTPTIGEKLE QFQPDIIHVANPAVLGLGGLFYAKKLNIPLVASYHTHLPQYLHHYGLGMLEGLLWELLKSGHNQADLNLCTSTVMVEELR NHGIERVDLWQRGVDTELFQPHYANLEMRNYLSQGKPNNKIILYVGRLGVEKEIDRIKPIVEAIPNTCIAIVGDGPNRQN LEQYFANTPTHFVGYLRGQKLASAYASADAFIFPSRTETLGLVLLEAMAAGTPVVAANSGGIPDIVTNGINGYLFDPDDE KGAITATQKLFAHSEERETLRKNARAEAERWGWSAATQQLRNYYQKIISAHSIALAA
Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to GlcAGroAc2 to generate 1,2-di-O-C16/C18:1-(alpha-D- mannopyranosyl)-(1-4)-(alpha-D-glucopyranosyluronic acid)-(1-3)- glycerol(ManGlcAGroAc2) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
Organism=Drosophila melanogaster, GI24654571, Length=333, Percent_Identity=24.3243243243243, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 41756; Mature: 41756
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIALFTETFLPKIDGIVTRLCHTVENLQRFGDRVLIFSPAGGLKEYQGSPICGIEGFPL CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHCCCCCCCCCCCCCC PLYPELKLAIPTPTIGEKLEQFQPDIIHVANPAVLGLGGLFYAKKLNIPLVASYHTHLPQ CCCCCCEEECCCCHHHHHHHHHCCCEEEECCCHHHHCCHHHHHHHCCCCEEEHHHHHHHH YLHHYGLGMLEGLLWELLKSGHNQADLNLCTSTVMVEELRNHGIERVDLWQRGVDTELFQ HHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHCC PHYANLEMRNYLSQGKPNNKIILYVGRLGVEKEIDRIKPIVEAIPNTCIAIVGDGPNRQN CCCCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHH LEQYFANTPTHFVGYLRGQKLASAYASADAFIFPSRTETLGLVLLEAMAAGTPVVAANSG HHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCC GIPDIVTNGINGYLFDPDDEKGAITATQKLFAHSEERETLRKNARAEAERWGWSAATQQL CCCHHHHCCCCCEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHH RNYYQKIISAHSIALAA HHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIALFTETFLPKIDGIVTRLCHTVENLQRFGDRVLIFSPAGGLKEYQGSPICGIEGFPL CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHCCCCCCCCCCCCCC PLYPELKLAIPTPTIGEKLEQFQPDIIHVANPAVLGLGGLFYAKKLNIPLVASYHTHLPQ CCCCCCEEECCCCHHHHHHHHHCCCEEEECCCHHHHCCHHHHHHHCCCCEEEHHHHHHHH YLHHYGLGMLEGLLWELLKSGHNQADLNLCTSTVMVEELRNHGIERVDLWQRGVDTELFQ HHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHCC PHYANLEMRNYLSQGKPNNKIILYVGRLGVEKEIDRIKPIVEAIPNTCIAIVGDGPNRQN CCCCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHH LEQYFANTPTHFVGYLRGQKLASAYASADAFIFPSRTETLGLVLLEAMAAGTPVVAANSG HHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCC GIPDIVTNGINGYLFDPDDEKGAITATQKLFAHSEERETLRKNARAEAERWGWSAATQQL CCCHHHHCCCCCEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHH RNYYQKIISAHSIALAA HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12948626 [H]