Click here to switch to the map view.

The map label for this gene is 113474258

Identifier: 113474258

GI number: 113474258

Start: 583692

End: 585479

Strand: Direct

Name: 113474258

Synonym: Tery_0378

Alternate gene names: NA

Gene position: 583692-585479 (Clockwise)

Preceding gene: 113474257

Following gene: 113474259

Centisome position: 7.53

GC content: 43.01

Gene sequence:

>1788_bases
GTGTTTGAGAAATTTTCCCAGGAAAGGTGGCTAATTTTGCCCATATTTCTAACTGTTTTGGGGAGCCCTGTTAAAGTGTC
TGCTCATCCGGTCTTGATTTCTAGTCAAGATCCAGAAATAGCTAGGACTTTCTGGCTATCTCGGACTAATACTAGCTCTT
TGGCTCAAGTTCCTGCTCCCATTCCTCCTAAAACTCCGGAACCCCCTCTTCCTAAATTTCCTATTCAGCTAGAGTCTCCC
CAACTTGATATTACTCCACCCGGAGCTTCAGAGAATGAATTAGAAAACTCTGAACCTTATCTACGGGTGAAGATTAATAA
GTTTGAATTTGTCGGTTACACGGCATTTACCAAGGAAGAATTAGAGGAGGTGGTTAAACCTTTTACTGAGCGACCTATTA
CCTTTGCTGAACTCCTCCAAGCTGAGAAAGCGGTGACTGATAAATACGTTCAGGCCGGTTATATCAATTCCGGAGCCGTA
ATCTTAGCTGGACAAAATCTCAAGGATGGGGTAGTAAAGATAAAGATTATTGAAGGGGAAATAGAAGATATTCAGGTAAC
CGTAACAGGACGCTTGAACCCCAACTATGTCCGTAGCCGGTTAGCTCTAGCTACGGAAAAGCCCTTTGATCAGAATAAGT
TACTTCGGGCTCTCCAATTATTACAGCTTGACCCCCTAATAGCTATTATTAAAGCAGAGGTATCAGCTGGACCCCTTCCC
CAATCTAGTTTGCTGACTGTCAGTGTTACCCAGGCAGACTCTTTTAGTATTGAATCTTTTGCTAACAATAGTCGCGCTCC
TAATGTGGGCAGCTTTCAACGGGGTCTTCGGTTAAAGCAGGGAAATTTATTGGGTTTTGGTGATGGACTAAACGCGAGCT
ATACAAATTCTGACGGTAGTAACAATTTTAGTTTTAACTACACTATTCCGTTTAATGCCCGCAATGGTACGATTCAACTT
ACTACAGAATTAACTGATACTCGTGTAGTTGAATCTCCTTTCGATGACCTTGATATTATGGGAGAGTCCCAATACTACGA
ACTGACAGTGCGCCAACCTATTATCCAATTTCCTACCCAAGAATTGGCTCTGGGTTTAACTTTTTATCGACAAAACCGTG
AGAGTGAACTATTGGGAGAACCTTTTCCTCTATCTCCTGGTGCTAATGAGAAGGGGGAAACACGAATCTCGGCGATTCGA
CTTTTCCAAGATTGGGTTAAACGGAATCAGGCAGAAGTATTTGCTGTTCGTTCTCAATTTAGTTTGGGAGTGGGGGCTTT
CAATGCTACCATTAATGATGACCTCCCCGATAGTCGCTTTTTTAGTTGGCGAGGACAAGGACAGTATGTGCGACGTTTAG
CTAAGAATTCGGATTCTTTGCTGGTGGTGCGCACAAATATCCAGTTGGCTGATAGAGGTTTGTTACCTGTAGAACAGTTT
CGTATTGGTGGTGTTAATAGTGTTAGGGGTTATCGCCAAGATTTATCGTTTACTGATAATGGACTTTTTTTAGGCACTGA
GGTCCGACTGCCTATTATGCGCTGGGATAATGTAGAGGGAGTTTTGCAGATAGTTCCTTTTGTGGATTTTGGAGTCGGTT
GGAACAGTTCTGATTTGCCTGAACCAGAGCACAATAGTCTGGCAGGAGTCGGTTTTGGGTTACTATGGCAGATGAGCGAT
CGCCTCAGCGCCCGCTTTGATTGGGGTATACCTTTGATGGACGTTACTTCGGAGGAAAAAACGTTACAGGAAAATGGTCT
TTATTTTACCATTGATGCTAAATTTTAG

Upstream 100 bases:

>100_bases
CCAGGCATGATATAATTCTTAAAAGCCTCAGTTAAACTAAGAAAGAAACATTGAGGTTTTATATCAGTTTTATCAAGTAA
TATATAAAGGTAGAATTTAA

Downstream 100 bases:

>100_bases
AGGGATAAAATTATGGACAAATTTCGATGTCAGCCTAAATTAAGTGCTTTTGTTGCTTTGGCCTTTTCTTTGTCGCCAAT
TGTTGCGACTGCCCAAATTG

Product: surface antigen (D15)

Products: NA

Alternate protein names: Outer Membrane Protein; Polypeptide-Transport-Associated Domain Protein ShlB-Type; Surface Antigen D; Surface Antigen Variable Number; Filamentous Haemagglutinin Outer Membrane Protein; Polypeptide-Transport-Associated ShlB-Type; Exported Surface Antigen Protein; Hemolysin Activation/Secretion Protein; Polypeptide-Transport-Associated Domain-Containing Protein; OMP85 Family Outer Membrane Protein

Number of amino acids: Translated: 595; Mature: 595

Protein sequence:

>595_residues
MFEKFSQERWLILPIFLTVLGSPVKVSAHPVLISSQDPEIARTFWLSRTNTSSLAQVPAPIPPKTPEPPLPKFPIQLESP
QLDITPPGASENELENSEPYLRVKINKFEFVGYTAFTKEELEEVVKPFTERPITFAELLQAEKAVTDKYVQAGYINSGAV
ILAGQNLKDGVVKIKIIEGEIEDIQVTVTGRLNPNYVRSRLALATEKPFDQNKLLRALQLLQLDPLIAIIKAEVSAGPLP
QSSLLTVSVTQADSFSIESFANNSRAPNVGSFQRGLRLKQGNLLGFGDGLNASYTNSDGSNNFSFNYTIPFNARNGTIQL
TTELTDTRVVESPFDDLDIMGESQYYELTVRQPIIQFPTQELALGLTFYRQNRESELLGEPFPLSPGANEKGETRISAIR
LFQDWVKRNQAEVFAVRSQFSLGVGAFNATINDDLPDSRFFSWRGQGQYVRRLAKNSDSLLVVRTNIQLADRGLLPVEQF
RIGGVNSVRGYRQDLSFTDNGLFLGTEVRLPIMRWDNVEGVLQIVPFVDFGVGWNSSDLPEPEHNSLAGVGFGLLWQMSD
RLSARFDWGIPLMDVTSEEKTLQENGLYFTIDAKF

Sequences:

>Translated_595_residues
MFEKFSQERWLILPIFLTVLGSPVKVSAHPVLISSQDPEIARTFWLSRTNTSSLAQVPAPIPPKTPEPPLPKFPIQLESP
QLDITPPGASENELENSEPYLRVKINKFEFVGYTAFTKEELEEVVKPFTERPITFAELLQAEKAVTDKYVQAGYINSGAV
ILAGQNLKDGVVKIKIIEGEIEDIQVTVTGRLNPNYVRSRLALATEKPFDQNKLLRALQLLQLDPLIAIIKAEVSAGPLP
QSSLLTVSVTQADSFSIESFANNSRAPNVGSFQRGLRLKQGNLLGFGDGLNASYTNSDGSNNFSFNYTIPFNARNGTIQL
TTELTDTRVVESPFDDLDIMGESQYYELTVRQPIIQFPTQELALGLTFYRQNRESELLGEPFPLSPGANEKGETRISAIR
LFQDWVKRNQAEVFAVRSQFSLGVGAFNATINDDLPDSRFFSWRGQGQYVRRLAKNSDSLLVVRTNIQLADRGLLPVEQF
RIGGVNSVRGYRQDLSFTDNGLFLGTEVRLPIMRWDNVEGVLQIVPFVDFGVGWNSSDLPEPEHNSLAGVGFGLLWQMSD
RLSARFDWGIPLMDVTSEEKTLQENGLYFTIDAKF
>Mature_595_residues
MFEKFSQERWLILPIFLTVLGSPVKVSAHPVLISSQDPEIARTFWLSRTNTSSLAQVPAPIPPKTPEPPLPKFPIQLESP
QLDITPPGASENELENSEPYLRVKINKFEFVGYTAFTKEELEEVVKPFTERPITFAELLQAEKAVTDKYVQAGYINSGAV
ILAGQNLKDGVVKIKIIEGEIEDIQVTVTGRLNPNYVRSRLALATEKPFDQNKLLRALQLLQLDPLIAIIKAEVSAGPLP
QSSLLTVSVTQADSFSIESFANNSRAPNVGSFQRGLRLKQGNLLGFGDGLNASYTNSDGSNNFSFNYTIPFNARNGTIQL
TTELTDTRVVESPFDDLDIMGESQYYELTVRQPIIQFPTQELALGLTFYRQNRESELLGEPFPLSPGANEKGETRISAIR
LFQDWVKRNQAEVFAVRSQFSLGVGAFNATINDDLPDSRFFSWRGQGQYVRRLAKNSDSLLVVRTNIQLADRGLLPVEQF
RIGGVNSVRGYRQDLSFTDNGLFLGTEVRLPIMRWDNVEGVLQIVPFVDFGVGWNSSDLPEPEHNSLAGVGFGLLWQMSD
RLSARFDWGIPLMDVTSEEKTLQENGLYFTIDAKF

Specific function: Unknown

COG id: COG2831

COG function: function code U; Hemolysin activation/secretion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66453; Mature: 66453

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS00063 ALDOKETO_REDUCTASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEKFSQERWLILPIFLTVLGSPVKVSAHPVLISSQDPEIARTFWLSRTNTSSLAQVPAP
CCCCCCCCCEEEHHHHHHHCCCCEEEECCEEEEECCCCCCEEEEEEECCCCCCHHCCCCC
IPPKTPEPPLPKFPIQLESPQLDITPPGASENELENSEPYLRVKINKFEFVGYTAFTKEE
CCCCCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCHHH
LEEVVKPFTERPITFAELLQAEKAVTDKYVQAGYINSGAVILAGQNLKDGVVKIKIIEGE
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEECCCEEEEECCCCCCCEEEEEEEECC
IEDIQVTVTGRLNPNYVRSRLALATEKPFDQNKLLRALQLLQLDPLIAIIKAEVSAGPLP
CEEEEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCC
QSSLLTVSVTQADSFSIESFANNSRAPNVGSFQRGLRLKQGNLLGFGDGLNASYTNSDGS
CCCEEEEEEECCCCCCHHHHCCCCCCCCCCHHHHCCEEECCCEEEECCCCCCCCCCCCCC
NNFSFNYTIPFNARNGTIQLTTELTDTRVVESPFDDLDIMGESQYYELTVRQPIIQFPTQ
CCEEEEEEEEECCCCCEEEEEEECCCCEEECCCCCCCEECCCCEEEEEEECCHHHHCCCH
ELALGLTFYRQNRESELLGEPFPLSPGANEKGETRISAIRLFQDWVKRNQAEVFAVRSQF
HHHEEEHEECCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC
SLGVGAFNATINDDLPDSRFFSWRGQGQYVRRLAKNSDSLLVVRTNIQLADRGLLPVEQF
CCCEEEEECEECCCCCCCCEEEECCCCHHHHHHHCCCCCEEEEEECEEEECCCCCCHHHH
RIGGVNSVRGYRQDLSFTDNGLFLGTEVRLPIMRWDNVEGVLQIVPFVDFGVGWNSSDLP
CCCCCHHHCHHHHCCCCCCCCEEEEEEEEEEEEECCCCCCCEEEECHHEECCCCCCCCCC
EPEHNSLAGVGFGLLWQMSDRLSARFDWGIPLMDVTSEEKTLQENGLYFTIDAKF
CCCCCCCCCCCHHHHEEHHHHHCCEECCCCCEEECCCCHHHHHHCCEEEEEECCC
>Mature Secondary Structure
MFEKFSQERWLILPIFLTVLGSPVKVSAHPVLISSQDPEIARTFWLSRTNTSSLAQVPAP
CCCCCCCCCEEEHHHHHHHCCCCEEEECCEEEEECCCCCCEEEEEEECCCCCCHHCCCCC
IPPKTPEPPLPKFPIQLESPQLDITPPGASENELENSEPYLRVKINKFEFVGYTAFTKEE
CCCCCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEEEECCHHH
LEEVVKPFTERPITFAELLQAEKAVTDKYVQAGYINSGAVILAGQNLKDGVVKIKIIEGE
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEECCCEEEEECCCCCCCEEEEEEEECC
IEDIQVTVTGRLNPNYVRSRLALATEKPFDQNKLLRALQLLQLDPLIAIIKAEVSAGPLP
CEEEEEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCC
QSSLLTVSVTQADSFSIESFANNSRAPNVGSFQRGLRLKQGNLLGFGDGLNASYTNSDGS
CCCEEEEEEECCCCCCHHHHCCCCCCCCCCHHHHCCEEECCCEEEECCCCCCCCCCCCCC
NNFSFNYTIPFNARNGTIQLTTELTDTRVVESPFDDLDIMGESQYYELTVRQPIIQFPTQ
CCEEEEEEEEECCCCCEEEEEEECCCCEEECCCCCCCEECCCCEEEEEEECCHHHHCCCH
ELALGLTFYRQNRESELLGEPFPLSPGANEKGETRISAIRLFQDWVKRNQAEVFAVRSQF
HHHEEEHEECCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC
SLGVGAFNATINDDLPDSRFFSWRGQGQYVRRLAKNSDSLLVVRTNIQLADRGLLPVEQF
CCCEEEEECEECCCCCCCCEEEECCCCHHHHHHHCCCCCEEEEEECEEEECCCCCCHHHH
RIGGVNSVRGYRQDLSFTDNGLFLGTEVRLPIMRWDNVEGVLQIVPFVDFGVGWNSSDLP
CCCCCHHHCHHHHCCCCCCCCEEEEEEEEEEEEECCCCCCCEEEECHHEECCCCCCCCCC
EPEHNSLAGVGFGLLWQMSDRLSARFDWGIPLMDVTSEEKTLQENGLYFTIDAKF
CCCCCCCCCCCHHHHEEHHHHHCCEECCCCCEEECCCCHHHHHHCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA